HHsearch 1.5 NAME c4ql5A_ FAM FILE c4ql5A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4ql5A_.a3m DATE Sat Jul 5 08:19:30 2014 LENG 68 match states, 68 columns in multiple alignment FILT 100 out of 104 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.6 EVD 0.3942 -1.0209 SEQ >ss_dssp CCEEEEEEEEEECTTSCEEEEETTSCEEEEEECHHHHTTTCCCCTTCEEEEEECTTCTTEEEEEEECC >sa_dssp EDEECDBDADDEDEECCBBADCEEDEDBCADBBDEBEEEEDEBDEEBDABACBDDEDEEDBDACDCCE >ss_pred CEEEEEEEEEEECCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEEEC >ss_conf 91999899999618953999988988999995376213377833798999994678777316999659 >Consensus dxiexxGxVxxxLxxxxfxVxlxdGxxxlaxixGKmRkxrixIxxGDxVxVexxxydxxkgrIixRyk >c4ql5A_ DVIEVEGKVVDTMPNAMFTVELENGHQILATVSGKIRKNYIRILAGDRVTVEMSPYDLTRGRITYRFK >UniRef50_B3L968(88-156:167) Translation initiation factor EF-1, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3L968_PLAKH E=9e-05 s/c=0.70 id=35% cov=100% DTIEMNGVVDQCLANTNFVVRIPNGETFLCFISGKLRINKVKINLGDMVKIQIHKlnFEKRRGKIVFRY- >UniRef50_Q4N873(69-132:142) Putative uncharacterized protein n=1 Tax=Theileria parva RepID=Q4N873_THEPA E=2e-07 s/c=0.90 id=36% cov=94% -----SGVVVSCMPNANFLVKLDvSNRELPCSLAGKLYINMVRIWNNSKVNVEIDLERPTTGRIIERYQ >UniRef50_B2UKM5(8-69:74) Translation initiation factor IF-1 n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKM5_AKKM8 E=0.0007 s/c=0.73 id=27% cov=93% -MVQAVAVIVERIADTAFRATLPNGKTAVAFVEKKNASLRDLLKPGDRVKVTICPADFDRARV----- >UniRef50_B1L6W5(26-92:116) S1 IF1 family protein n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L6W5_KORCO E=5e-13 s/c=1.13 id=29% cov=100% DELEIFGRVLEPLGKGHFRVECIDNLIRICRVRGKLRGRRAWIKRGDIVLISLWPFQRTKGDIVVRY- >UniRef50_Q22Y66(36-95:213) Eukaryotic initiation factor 1A family protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q22Y66_TETTH E=2e-07 s/c=0.95 id=21% cov=90% ------AIIEKNLGQLHFAVACSDGKVRLGVLRGRLRY-KIYVNEGDIVLVGLRDYQDDKCDIILKY- >UniRef50_A8MC85(11-76:102) S1 IF1 family protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MC85_CALMQ E=1e-11 s/c=1.07 id=27% cov=94% ---EMLAKVTDIVGDDRVKVVCEDGNVRIARIPGKYRK-RMWIRIGDYLIVAPWDFEPSKADVVYKY- >UniRef50_B7XIE9(16-81:118) Translation initiation factor 1 IF-1 n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XIE9_ENTBH E=6e-06 s/c=0.79 id=18% cov=49% ------GIILQALGHNKFKVYCSDALTRIASIRGNMKK------------------------------ >UniRef50_A8BAD9(32-97:160) Eukaryotic translation initiation factor 1A n=2 Tax=Giardia intestinalis RepID=A8BAD9_GIALA E=1e-10 s/c=1.03 id=20% cov=97% ---EVYGVCTKVLGCGYYTIYCLDGIRRRCHLRGALKKRRVMMHAGDLVLVSLREFSTETdADIVHKYQ >UniRef50_C6UN36(9-67:68) Putative translation initiation factor IF-1 n=1 Tax=Candidatus Hodgkinia cicadicola Dsem RepID=C6UN36_HODCD E=8e-09 s/c=1.05 id=37% cov=88% ------GVVVEALPSASFGVKLDGGGRVVAYLAGKLKAARTKVRVGDRVLVEVAA---RAGRIVFKYK # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * D 1 * * 833 1357 * * * * * * * 4373 * * * * * * * * 1 0 * * * * * * 3406 0 0 V 2 3434 5844 * 2924 * * 5485 * * 1987 3447 * 6340 * * 6366 2929 2179 * 6031 2 0 * * * * * * 3740 0 0 I 3 5245 * * * 3229 * * 1131 * 2906 3860 * * * * * * 2266 * * 3 0 * * * * * * 3865 0 0 E 4 * * 6131 627 * * * * 3473 * * * * 2788 4590 * 4017 * * * 4 0 * * * * * * 4307 0 0 V 5 3511 * * * 3669 * * 2557 * 3774 2006 * * * * * 5784 1628 * * 5 0 * * * * * * 4320 0 0 E 6 5367 * 4704 1536 3349 * * 5025 6852 3233 * 4360 5189 4814 * 3289 5869 4243 * 3949 6 0 * * * * * * 4393 0 0 G 7 2605 * * * * 259 * * * * * * * * * * * * * * 7 0 * * * * * * 4572 0 0 K 8 6600 * * 5766 * * * 2796 2305 3953 * * * 3730 4280 5610 3467 1731 * 5538 8 0 * * * * * * 4610 0 0 V 9 * 5567 * * * * * 2240 * * * * * * * * * 382 * * 9 0 * * * * * * 4691 0 0 V 10 5495 * 5576 2764 * * * 2543 6146 4239 4961 * * 5581 * 6083 1845 2152 * * 10 0 * * * * * * 4785 0 0 D 11 6669 5774 4973 1468 * 5976 4727 5954 2261 * * 5787 * 3327 3510 3610 * 6307 * * 11 0 * * * * * * 4785 0 0 T 12 2525 3786 * 5038 * 6478 6009 4303 5333 3424 2403 5504 4167 * 4957 3707 5971 2874 * * 12 0 * * * * * * 4785 0 0 M 13 6543 * * 6446 6188 5539 4717 4937 * 512 4252 5842 * 6257 5827 6574 * 4887 * 5291 13 0 * * * * * * 4752 0 0 P 14 3830 * * * * 1162 * * 5539 * * 6188 1551 5842 4762 4716 6190 * * * 14 0 * * * * * * 4752 0 0 N 15 3085 5499 2579 * 6452 3365 5582 * 6263 * * 1342 * 4906 * 3583 6236 * 5283 * 15 15 * 6574 * * * * 4752 0 0 A 16 2168 6292 4425 6360 * 1408 * * 4523 5378 * 5262 5978 6166 6172 4217 2972 * * 6523 16 0 * * * * 0 * 4754 0 1000 M 17 4941 * 6193 4741 4877 * 3812 4667 4329 5292 2723 3103 * 5806 1889 6033 5542 4633 6788 4190 17 13 6841 * 1000 1000 * * 4749 1000 0 F 18 * 5636 * * 793 * * 6166 * 2881 4810 * * * * * * 4176 * 2626 18 0 * * * * * * 4749 0 0 T 19 6159 * 4447 3069 * 6040 * 4508 2506 3575 5098 * * 6702 1653 5538 3794 4635 * 6482 19 15 6550 * 0 * * * 4742 1000 0 V 20 3618 5610 * * * * * 4240 * 4723 * * * * * * 6588 328 * * 20 0 * * * * * * 4744 0 0 E 21 6165 5347 5570 2951 7376 * 6011 4176 2359 3550 5289 * * 3835 2788 4375 3877 4692 * 4092 21 0 * * * * * * 4744 0 0 L 22 * 1284 * * * * * 4129 * 957 * * * * * * * 5855 * * 22 26 5809 * 4292 76 * * 4744 1482 0 E 23 3546 * 2512 1998 3621 6561 * 6304 * 4146 4848 3731 3902 5385 * 3458 5624 6004 * * 23 55 5132 6818 0 * * * 4744 1000 0 N 24 4969 * 1059 * * 4255 * * * * * 1382 * 5420 * 5130 * * * * 24 45 5040 * 4007 93 * 0 4741 1509 1000 G 25 6949 * 4002 5221 * 467 5607 * 5795 * * 3629 * 4345 * 6534 * * * * 25 0 * * * * * 0 4741 0 1000 H 26 5082 5954 6314 3856 5917 6063 2594 3663 2306 4497 6035 5147 6586 4003 4060 5272 5322 3296 * 5554 26 0 * * * * 0 * 4741 0 1000 Q 27 6432 * 5052 2380 * * * 2971 2821 5593 7193 6517 * 3224 3908 6318 2844 3174 * 5476 27 0 * * * * * * 4741 0 0 I 28 4951 6277 * * 4786 * * 2303 * 4571 5848 * * * 1314 * * 2095 * 5627 28 0 * * * * * * 4741 0 0 L 29 6767 * * 5997 * * * 2752 4317 1273 3373 5348 5133 6443 4594 * 4193 3244 * * 29 0 * * * * * * 4741 0 0 A 30 1014 1685 * * * 2691 * * * * * 6825 * * * * 6012 6099 * * 30 0 * * * * * * 4738 0 0 T 31 * * * * 3583 * 1824 * 4103 7198 * * * 6540 2013 3565 5790 4384 * 2643 31 0 * * * * * * 4738 0 0 V 32 4340 * * * 5734 * * 981 * 2549 * * 6596 * * 5411 5125 2382 * * 32 0 * * * * * * 4738 0 0 S 33 2902 5142 * 4984 * 5850 * * 4408 * * * 2279 * 2328 1643 * 5926 * * 33 15 * 6618 * * * * 4738 0 0 G 34 * * * * * 118 * * 4960 * * * * * 4434 * * * * * 34 0 * * * * 0 * 4823 0 1000 K 35 5123 * * * * 6637 * * 470 * * 7006 5357 6360 2708 5291 * 5935 * * 35 38 * 5262 * * * * 4738 0 0 I 36 5718 * * * 4754 * * 2243 * 1927 1449 5002 * * 4818 * * 5296 * 6480 36 87 * 4103 * * 0 * 4766 0 1622 R 37 5031 * 5649 * * * 6629 * 2585 6486 5744 * * 6431 594 5225 6307 * * 5091 37 172 5291 3522 2000 415 0 * 4693 1000 2360 K 38 4860 * * * * 6243 6672 3436 1157 4428 5503 * * 4804 2811 4015 5895 5372 * 4261 38 306 * 2386 * * 0 * 4639 0 2000 N 39 4706 * * * 3931 5118 3233 * 4278 4865 * 1941 * * 1612 3865 5729 * * * 39 27 * 5729 * * 0 * 4724 0 2372 Y 40 6536 * * 5746 3471 * 6210 * 2134 6775 5115 4724 * * 1118 6053 6017 * * 3794 40 15 * 6637 * * 0 * 4798 0 1000 I 41 6183 * 5019 * 5314 * * 1069 * 4389 4496 * * * * * 5087 1631 6783 * 41 0 * * * * 0 * 4802 0 1000 R 42 * * * * 5614 * 6019 * 2522 4344 6046 5320 * * 1483 * * * 1603 6185 42 13 * 6787 * * * * 4811 0 0 I 43 * * * * * * * 713 * 3032 3321 * * * * * 5498 2782 * * 43 0 * * * * 0 * 4727 0 1000 L 44 4850 * * * * 6244 6031 3621 3631 2314 4813 2794 * 4538 2432 5880 5721 3301 5138 * 44 0 * * * * * * 4724 0 0 A 45 3247 * 6371 2153 * * * 4196 * 2971 4779 4231 2260 4288 6198 7413 4906 3931 * 7055 45 0 * * * * * * 4724 0 0 G 46 * * 6031 7309 5895 247 5535 * 6552 * * 3982 * * * 5407 * * * * 46 0 * * * * * * 4724 0 0 D 47 * * 79 * * * * * * * * 5321 * * * 5138 * * * * 47 0 * * * * * * 4724 0 0 R 48 * * * 5626 * * * 2407 2583 4457 3930 * * * 1871 7376 5466 2961 * 3593 48 0 * * * * * * 4724 0 0 V 49 * * * * * * * 3807 * 4665 * * * * * * * 170 * * 49 0 * * * * * * 4724 0 0 T 50 * * 4303 5876 * * * 2833 2126 1473 5535 4895 * 6553 4983 * 3834 4840 * * 50 0 * * * * * * 4724 0 0 V 51 5748 * * * 5032 * * 2684 * 4003 6111 * * * * * * 477 * * 51 0 * * * * * * 4719 0 0 E 52 2664 * 5937 1184 * 4464 6729 5839 3919 5733 * * * 4475 5695 3352 4846 4978 * * 52 0 * * * * * * 4683 0 0 M 53 * * * * 5165 * 5937 2441 * 1562 2930 * 2457 * * 6854 * 3171 * * 53 0 * * * * * * 4683 0 0 S 54 4971 4374 5143 * 5988 * 4429 * * * * 6739 6006 * 2617 1640 3826 * 1999 * 54 47 5988 5926 0 * * * 4687 1000 0 P 55 5402 * 2320 3020 * 5702 6465 5348 4739 4492 * * 1341 4883 5559 4686 6586 5894 * * 55 78 4739 6056 1000 1000 * 0 4664 1151 1000 Y 56 5037 * * 4311 1785 5637 5241 * * 5155 * 5292 * * * 6588 5697 5667 6334 1098 56 16 6514 * 2322 322 * 0 4648 1000 1555 D 57 5697 * 1056 3444 * 4834 * * 6620 * * 4306 * 2265 5111 3985 * * * 6385 57 13 6764 * 0 * * 0 4648 1000 1555 L 58 * * 2426 5637 4641 * * * 3725 1776 5417 6519 2528 6137 4517 3727 4899 6454 * * 58 9 7307 * 0 * 927 1077 4648 1000 1555 T 59 * * 2581 2541 4947 5359 * * 4502 * * 3873 * * 4260 2802 1754 * * * 59 74 4319 * 1093 912 * 0 4588 2397 1000 R 60 6065 * * 6831 * * 5603 * 920 6205 * * * 6435 1587 * 3853 * * * 60 33 5472 * 0 * 0 * 4588 1000 1000 G 61 1894 4868 * * * 521 * * * * * * * * * * * * * * 61 0 * * * * * * 4610 0 0 R 62 * 5129 1404 4689 * * * 6001 4778 5612 * * * * 1052 * * * * * 62 0 * * * * * * 4610 0 0 I 63 * * * * * * * 413 * 6143 * * * * * * * 2092 * * 63 0 * * * * * * 4610 0 0 T 64 6689 * 5630 * * * * 1292 * 4841 * 5721 * * * * 2723 1488 * * 64 0 * * * * * * 4515 0 0 Y 65 7355 6087 * 4496 3057 * 3112 * 6217 4855 5918 * * * 4154 5480 * 6128 3224 1202 65 0 * * * * * * 4515 0 0 R 66 * * * * * * * * 1813 * * * * * 483 * * * * * 66 0 * * * * * * 4439 0 0 F 67 7286 * 6304 5990 3357 * 3205 6792 4848 3063 * * * * 5533 7074 7363 * * 835 67 0 * * * * * * 4483 0 0 K 68 * * * * * * * * 833 * * * * 2729 1797 * * * * * 68 0 * * 0 * * * 3401 0 0 //