HHsearch 1.5 NAME c4pj1V_ FAM FILE c4pj1V_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4pj1V_.a3m DATE Sat May 2 08:11:50 2015 LENG 100 match states, 100 columns in multiple alignment FILT 103 out of 197 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.5 EVD 0.4142 -0.5817 SEQ >ss_dssp CBCBTTBCCCTTEEEEEECCCCSBCTTSCBCCCSSSCCCSEEEEEEECSCBSCSSSSCBCCSSCTTCEEECCSSCCEEEEETTEEEEEEETTTCCEEECC >sa_dssp EEDCDECEBEDCCAAADCDECEDDDEEEEEDEDEEEDECDDBCBBABADBCEDEEEEDDECEBEDECEBCABEEEDEECECEEEDBBCBDBEDBEDDDEE >ss_pred CCCCCCEEECCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCEECCCCCCCCEEEECCCCCCEEEECCEEEEEEEHHHEEEEEEC >ss_conf 9754402212767999974765432204881378877724699999508806467758204417888999637786589989949999961022799809 >Consensus gxxxxkixPlxDrVLVkxxxxexxTxgGIxLpxsxxxkxxxGxVvAVGxGxxxxxGxxxpxxVkxGDxVlxxxyxGxevxxxxxxyxiixxxDILaxixd >c4pj1V_ GQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKYVD >UniRef50_D1AYD3(2-86:91) 10 kDa chaperonin n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AYD3_STRM9 E=2e-05 s/c=0.59 id=27% cov=86% -----KIKPLGNRILIEKVKVEKRTRTGLILTENIEAENNYAKVLEVSEDVVGK--------IKRDDTVLVDLSNAMEVRVDGSVKYILDIKDVYAVI-- >UniRef50_A7ANU0(90-184:294) Chaperonin, 10 kDa family protein n=1 Tax=Babesia bovis RepID=A7ANU0_BABBO E=7e-12 s/c=0.75 id=27% cov=92% -----ELKPANNYVLIAKTNAHEYSAGGVYI-GSKPNKEFAGRVIATGPGKMLeETGAIIPMSVKVGDIVLYdPPVEQPVITYKKQDCVMITEDQIYAR- -- >UniRef50_C7X611(8-123:128) Chaperonin GroS n=5 Tax=Bacteroidales RepID=C7X611_9PORP E=3e-13 s/c=0.66 id=24% cov=95% -KDIDKFLMIGDKVLIKPKNPQSQTKTGLYLPPSVQqgEKIQAGYIIKTGPGyplpsqseehevwekKKGEEVQYLPLQAREGDLAVYLQNAAYEINFND EKFLIVPHSAIL----- >UniRef50_D2R6P2(7-100:111) Chaperonin Cpn10 n=5 Tax=Planctomycetaceae RepID=D2R6P2_9PLAN E=5e-11 s/c=0.73 id=23% cov=94% -RVFEYVEPIGARVLVRKDEPKRQTKGGIALPDAAEIPTITGRIVAISAQIEND----EDLPLRQYDKILFHPKSAIPVDFEaDNQLYVVPVEDIVAVF- - >UniRef50_A9TW89(4-92:93) Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TW89_PHYPA E=2e-10 s/c=0.75 id=27% cov=85% ---YSQIVPQADRVLIRLDALAPTSAGGVLLPSSAVKydRFLQGEIIAAGS---------EVNEVEKGQRVMFADINAYEINLGtSDRLCFCRSGDLLA- --- >UniRef50_B3L8Q3(164-259:259) Chaperonin, putative n=9 Tax=Plasmodium RepID=B3L8Q3_PLAKH E=1e-15 s/c=0.88 id=23% cov=93% ------VTPFYDRVLIKLIDTNAASNSLVIMPESKSEKSTDGLVVAVGDGIYDSNNNKVPMDIRVNDYIKFSPFSNEscEFTYNGEKFTFVRGRYIMAKY -- >UniRef50_A7KV50(8-102:104) GroES n=1 Tax=Bacillus phage 0305phi8-36 RepID=A7KV50_9CAUD E=6e-18 s/c=0.97 id=24% cov=96% ---YEGIQVLGARAVIKLEKESDTTASGIILPTGDKDPKFEGVVVAIGDGQRKPDGGRIPMDVEPGQRVIYSRMAGVPVSLDGEEFLVINERDIIAVI-- >UniRef50_P75205(2-97:116) 10 kDa chaperonin n=3 Tax=Mycoplasma RepID=CH10_MYCPN E=3e-12 s/c=0.76 id=27% cov=92% -----KITPIHDNILVSLVESnkEEVSQKGIITALANPDKNesaHKGTVVALGAGPAYGKSEKPKYAFGIGDTIYFKEYSGISFEEEGTKYKIISLEDVL A---- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 2749 0 0 Q 2 * * 3269 3151 * * * * 3100 * 3339 * * 1989 1661 * * * * * 2 0 * * * * * * 3800 0 0 A 3 1923 * 2586 * * * * * 3848 * * * * 3324 3757 2037 * 3595 * * 3 0 * * * * * * 4093 0 0 F 4 3475 * * * 2601 * 4504 1588 5491 2923 * * * * * * * 5453 * 2382 4 0 * * * * * * 4681 0 0 R 5 5420 * 3139 3831 * * * * 1467 * * 5765 5014 * 2222 3783 3402 * * * 5 0 * * * * * * 4767 0 0 K 6 6326 * 5985 3929 * 3903 6150 * 1182 5228 5872 6223 * 5824 3286 3533 3380 * * 5349 6 33 5469 * 0 * * * 5166 1000 0 F 7 * * * * 2741 * * 1514 * 1681 6240 * * * * * * 2792 * 5012 7 0 * * * * * * 5506 0 0 L 8 3916 * * 5379 * * * 4062 1547 3898 6997 * * 3367 2688 * 3284 3683 * * 8 0 * * * * * * 5506 0 0 P 9 6034 * * * * * * * * 6154 6037 * 111 * * * * 5096 * * 9 0 * * * * * * 5617 0 0 L 10 5964 5582 * * 5832 * * 3100 6776 670 5123 * 6842 4446 * * 4340 4466 * 6229 10 0 * * * * * * 5631 0 0 F 11 4651 6349 4375 4908 3414 1339 3592 * 6155 4064 5500 3877 * * 5105 5009 * * * 3831 11 0 * * * * * * 5670 0 0 D 12 4873 * 575 4255 * 4890 * * 4820 * 6041 2892 * 6854 * 6118 * * * * 12 0 * * * * * * 5673 0 0 R 13 * * * * 4524 * 6441 * 4058 * 4221 3549 * * 605 7328 4777 * 6259 4945 13 0 * * * * * * 5673 0 0 V 14 5422 * * * * * * 2333 * 4975 6612 * * * * * * 442 * * 14 0 * * * * * * 5673 0 0 L 15 6166 * * * 5978 * * 3286 * 538 6539 * * * * * * 2572 * * 15 0 * * * * * * 5673 0 0 V 16 * * * * * * * 1624 * 2511 * * * * * * * 1000 * * 16 0 * * * * * * 5673 0 0 E 17 6005 * * 2350 * * * 6360 1436 4979 * * * 2664 2733 5207 * 5045 * 6763 17 20 * 6189 * * * * 5673 0 0 R 18 3495 * * 5474 5720 * 6724 4300 2227 3205 6100 * 2886 7140 2373 * 6372 2995 * * 18 53 6667 5248 0 * * 0 5642 1000 1000 S 19 3707 5605 2754 3402 6115 6492 6072 2316 3423 3588 * * * 4889 4715 4340 5002 3475 * * 19 14 6676 * 0 * 1411 680 5590 1000 1807 A 20 3748 * 3265 1449 * 6521 4521 6359 2801 5374 * 3922 6548 4704 5380 7154 4487 5043 * * 20 21 6125 * 1000 1000 0 * 5562 1000 1253 A 21 2065 * 5358 2554 * 4458 5969 7039 4317 4408 6958 6534 3183 4884 5014 3850 4701 3562 * 6189 21 17 6413 * 1000 1000 * * 5673 1000 0 E 22 3004 * 3604 1211 * * 6005 * 3375 6392 * 5914 3400 4435 6523 5521 6189 5423 * 6628 22 19 * 6259 * * * * 5673 0 0 T 23 4327 * 2824 1928 * * * 5744 3681 * * 4723 4765 4724 4556 3158 2587 5959 * * 23 0 * * * * * 0 5592 0 1000 V 24 4158 * * 4440 * 6120 * 4939 1578 * 4600 * 5703 3060 3335 4878 3337 3506 * 6006 24 60 * 4627 * * * 0 5592 0 1000 T 25 * * * * 6316 * * * 4523 6349 * * 5583 6359 6034 2596 478 * * * 25 0 * * * * 288 2464 5584 0 2677 K 26 2124 * 4243 3938 * 6738 4749 4424 2054 6884 6577 5907 * 4238 4890 3695 4957 3526 * * 26 40 5185 * 1433 667 0 * 5680 1703 1000 G 27 4036 * * * 6303 1149 * * 4974 5223 * 5279 * * * 1646 3805 * * * 27 0 * * * * * * 5673 0 0 G 28 4979 * * * * 203 * * 6534 5076 * 6118 * * * 4480 * * * * 28 32 6773 6303 0 * * * 5673 1000 0 I 29 * * * * 5508 5976 * 932 * 1945 * * * * * * 6025 2617 * * 29 0 * * * * * 0 5652 0 1000 M 30 5094 * * * 3168 5976 * 2286 * 2043 7274 * * 5967 * * * 2400 6239 2550 30 0 * * * * 0 * 5652 0 1000 L 31 5988 * * * * * * 2028 * 707 5914 * * * * 6215 4366 4376 * * 31 86 5391 4889 1849 469 * * 5673 1506 0 P 32 2860 * * * * 5215 * * * * * * 607 5738 * 4673 3047 * * * 32 61 5463 5738 755 1296 0 * 5640 1851 1988 E 33 3496 * 1967 2119 6089 3519 * 5343 6425 5365 * 4673 4438 5682 6493 3471 4136 * * * 33 0 * * * * 0 * 5667 0 1645 K 34 3773 * 5259 4168 * 3536 * * 3316 * * 3532 * 4178 * 1617 2551 5638 * * 34 64 5566 5485 3584 126 * * 5673 1906 0 S 35 1370 * 4693 5335 * 4182 6248 5524 3274 7198 5837 3602 6240 * * 3529 4968 3408 7073 5955 35 24 5935 * 1000 1000 0 * 5655 1000 1653 Q 36 3626 * 4025 3864 * 4977 5424 6814 1698 5700 * 4837 3916 3184 4612 4793 4072 4326 * * 36 87 4469 6259 833 1189 * * 5673 2379 0 G 37 3985 * 3416 1453 * 3312 * 4793 3033 * 4651 4660 4889 5957 6506 4045 5772 * * * 37 78 4248 * 902 1105 * 0 5592 2439 1000 K 38 3797 * 5733 4009 * 6962 * 7078 908 * * 4689 4140 5208 3440 4591 4558 * * * 38 58 4667 * 1458 653 * 0 5592 2501 1000 V 39 6407 * 6605 6006 4330 * 7205 4199 4180 3421 * 4700 1888 3604 * 2830 3314 3820 * * 39 81 4203 * 1263 778 0 * 5592 2899 1000 L 40 4885 * * 5501 3782 5638 3966 4720 4841 3716 6360 2500 5002 3340 6270 3733 2856 3703 * 5928 40 43 5463 7204 1781 496 * * 5673 1541 0 Q 41 4441 * 5913 2805 5703 6890 4755 3424 3755 4378 4158 6702 * 2945 3921 3868 3484 4196 6202 5223 41 18 * 6374 * * 0 * 5677 0 1000 A 42 1940 5664 * * * 501 * * * * * * * * * * * * * 6242 42 16 * 6507 * * * 0 5660 0 1000 T 43 * * 6177 2368 6570 6230 * 3648 2374 4363 6141 * * 5266 3951 6112 2402 3017 * 6030 43 0 * * * * * 0 5659 0 1601 V 44 * * * * * * * 2445 * 5611 * * * * * * * 329 * * 44 0 * * * * * 0 5659 0 1601 V 45 5133 * * 6422 * * * 1770 6792 2128 5925 * * * * 5611 * 1351 * * 45 19 * 6230 * * 908 1098 5659 0 1601 A 46 540 * * 3643 * 6618 * * 4601 * 6637 * * 4783 6533 3130 * * 6735 * 46 0 * * * * * 0 5644 0 1616 V 47 4265 * * * * * * 2935 * 3384 * * * * * 6495 3937 632 * * 47 21 * 6145 * * * 0 5644 0 1616 G 48 4770 * * * * 271 * * * * * 6511 * * * 3018 * * * * 48 20 6197 * 0 * * 0 5610 1000 2125 S 49 4008 6084 3349 3607 * 6588 5081 * 4768 6546 * 4596 1525 5043 5223 4050 2857 6479 * * 49 104 * 3841 * * * 0 5610 0 2125 G 50 4651 * 3743 6341 * 407 * 6834 * * * 5441 6079 5123 * 5719 5343 * * * 50 144 4482 4323 2772 228 2220 349 5551 2155 3480 S 51 4416 5714 6359 5055 6778 5604 5042 4921 2106 5248 6288 * 6102 6195 2419 3192 4537 3046 * 4694 51 66 6368 4950 0 * 1514 622 5508 1000 3798 K 52 4178 * 5808 4353 * * 6340 4189 2390 3204 4182 * 4537 * 2461 6285 6842 2919 5940 4018 52 21 * 6129 * * 2187 358 5507 0 3597 G 53 5264 * 2477 4620 6618 3496 5340 6813 5402 2936 * 2512 * 6372 * 4349 2772 4641 5850 5227 53 191 3747 4327 0 * 2901 207 5508 2922 3465 K 54 3428 * 2777 2408 * 4230 5515 3799 2638 5570 6842 4699 6184 3938 5295 4525 * 5545 5185 * 54 191 4932 3458 0 * 3220 164 5425 1683 3871 G 55 6054 * 2422 4252 * 4342 * * 2797 * * 1956 * 5191 * 3169 2830 5981 * * 55 142 5558 3784 0 * 2200 354 5452 1509 4291 G 56 * 6342 5018 * * 440 5713 6202 6511 * * 5576 5614 6083 * 4037 5330 4865 * * 56 13 6846 * 0 * * 0 5410 1000 4395 E 57 4527 * 4196 1882 6438 4096 5664 6206 2343 5573 * 4087 * 4875 4248 4934 3697 4209 * * 57 48 5614 6342 3907 100 3333 151 5410 1000 4395 I 58 5493 * 4237 6422 4230 4646 6284 3106 3203 2885 * 5158 6087 * 2336 5929 5015 3477 * 3857 58 32 5494 * 2322 322 1899 450 5415 1000 4167 Q 59 6534 * 6651 3349 6351 6932 4786 2540 4301 3672 5218 3726 4609 6019 4850 5546 4625 1987 * 6000 59 0 * * * * 3797 108 5498 0 3862 P 60 3379 * 3552 4281 * * * * 3681 5975 * 4811 988 * * 5798 3450 5374 * * 60 67 5278 5651 3397 144 2511 278 5496 1640 3878 V 61 * 4063 * 6256 5398 5679 * 3224 6589 2340 2127 5511 3015 * * 6028 5036 3058 * 5134 61 72 5165 5584 2726 236 1783 495 5469 1473 3632 S 62 5320 4125 2439 2700 * 4656 * 4517 4773 4798 * 5294 3448 3773 * 2907 3581 7237 * 6694 62 45 5012 * 0 * 485 1809 5553 1622 3558 V 63 4475 * * * 5001 * * 2762 * 2380 * * * * * * * 775 * * 63 0 * * * * 523 1717 5644 0 2060 K 64 3550 * 5922 5518 * 5736 7499 * 1055 * * 6029 5392 3642 2936 3700 5318 5732 * * 64 0 * * * * 0 * 5674 0 1000 V 65 3675 * * 3630 * * 6045 3668 2737 5227 * * 2760 6221 5472 7278 5393 1487 * * 65 0 * * * * * * 5682 0 0 G 66 6188 * 4364 * * 260 * * 6109 * * 3745 * * * * * * * 6221 66 0 * * * * * * 5682 0 0 D 67 4845 * 361 6225 * 6631 * * * * 6132 5257 * 3588 * 4654 * * * * 67 0 * * * * * * 5682 0 0 K 68 5145 6985 * 4816 * 6521 4165 3643 2197 5142 4957 * * 5944 2492 6394 2400 4016 6240 4934 68 0 * * * * * * 5682 0 0 V 69 5028 * * * * * * 2989 * * * * * * * * 6240 269 * * 69 0 * * * * * * 5682 0 0 L 70 5974 * * * 4749 * * 2435 5263 1277 4181 * * 6243 * * * 2353 * 4077 70 0 * * * * * * 5682 0 0 L 71 5668 * * * 1341 * 6631 4065 * 3119 6406 * * * * * * 3729 * 1673 71 53 4795 * 356 2194 * * 5682 1986 0 P 72 4544 * 4625 3552 5631 3846 6221 * 3110 4842 5958 3138 2462 6023 4536 2545 4771 * * * 72 0 * * * * * * 5682 0 0 E 73 4988 * 3295 2375 * 3885 * * 1662 6414 * 4930 3213 4035 4634 4780 * * * * 73 33 6109 6947 0 * * * 5682 1000 0 Y 74 * * * 5107 2308 4926 5491 5805 5442 * 6392 5025 5667 * * 3454 * 5067 4501 1167 74 0 * * * * 0 * 5676 0 1000 G 75 1732 * 4141 4573 * 2231 6249 * 4181 * * 4264 5425 6734 * 2359 6240 * 5668 7268 75 63 4553 * 2941 201 * * 5682 2572 0 G 76 3049 * 6249 * * 541 * 5298 * * 6667 5910 * 5261 5433 4651 6985 * * 5057 76 45 5031 * 1708 527 * * 5682 1702 0 T 77 4075 * 3781 4405 * 5579 6394 3737 4844 5246 4853 4704 5983 3879 * 3289 1868 3533 * 4953 77 65 4500 * 1440 663 * * 5682 2479 0 K 78 4931 * 3264 1170 * * 6706 * 3013 6042 * 4993 4450 4589 6045 4284 4199 5983 6107 * 78 0 * * * * * * 5682 0 0 V 79 * * * 5668 2872 * * 1766 * 3708 4562 * * * * * * 1264 * 6109 79 9 7268 * 0 * * * 5682 1000 0 V 80 * * 4987 2591 * * 7185 6167 1470 * * 3118 5347 4499 4377 5547 2891 4939 * * 80 35 5366 * 0 * * * 5682 1530 0 L 81 4213 6888 5033 4483 3422 * 4650 2964 6785 2681 5865 5621 * 5648 7497 4983 5953 2568 5347 2920 81 104 3849 * 1119 890 * * 5682 2745 0 D 82 * * 1432 2957 * 2407 6188 * 4353 * * 2588 6552 4718 6613 6095 6706 * * * 82 72 4369 * 0 * * * 5682 2550 0 D 83 7104 * 2405 3270 * 1437 * * 3943 * * 2857 * * 6532 3288 6092 * * * 83 10 7133 * 1585 585 * * 5682 1000 0 K 84 5264 * 3817 1537 * 5608 6243 6109 2483 6706 * 5090 * 3425 * 4016 3617 4159 * * 84 70 4946 6045 2611 258 * * 5682 2294 0 D 85 6379 * 2821 1607 * * * * 2154 * 5996 4318 5662 4488 5065 4340 3796 6353 * * 85 0 * * * * 0 * 5651 0 1000 Y 86 * 4094 * * 3216 5145 4521 5051 5481 2706 6237 * * * * * 6326 4670 6243 1065 86 0 * * * * * * 5682 0 0 F 87 4389 5817 * 6740 4262 * 6729 3113 4287 1819 4396 * * 4888 5044 3990 3860 3116 * 4193 87 15 6552 * 0 * * * 5682 1000 0 L 88 6785 * * * 2717 * * 1712 * 1885 4694 * * * * * * 2157 * * 88 0 * * * * * * 5682 0 0 F 89 * 4955 * * 4367 * * 2055 * 2074 3348 * * * * * * 1943 * 3596 89 0 * * * * * * 5682 0 0 R 90 5375 * 3528 4241 * 7185 5135 * 2752 * * 3441 4129 5308 1568 3085 5437 * * * 90 0 * * * * * * 5682 0 0 D 91 3251 * 3928 1367 5834 5458 5024 5684 * 4495 5797 5459 * 4071 4388 3902 * 3633 * 6479 91 0 * * * * * * 5686 0 0 G 92 3776 * 2083 2352 5620 4410 6165 * 3399 * * 4104 * 5665 3409 3120 5983 5954 * * 92 0 * * * * * * 5686 0 0 D 93 4273 6025 540 2912 * * 6586 * 6544 * * 6831 * 4918 * 4934 * * * 5901 93 0 * * * * * * 5686 0 0 I 94 * 5821 * * * * * 691 * 2973 * * * * * * * 2086 * * 94 0 * * * * * * 5599 0 0 L 95 * * * * 5299 * * 2921 * 620 3619 * * * * 5987 * 3929 * 5101 95 0 * * * * * * 5499 0 0 G 96 598 5262 * * * 1745 * * * * * * * * * * * 6070 * * 96 0 * * * * * * 5473 0 0 K 97 5867 * * * 6213 * * 2591 1839 * * * * 4930 4751 5426 5120 1431 * 5007 97 0 * * * * * * 5407 0 0 Y 98 * * * * 2684 * * 1333 * 1640 * * * * * * * 3536 * 4633 98 0 * * * * * * 5298 0 0 V 99 3152 3734 3687 2333 * * * * * * * 2047 * * * 4491 * 2002 * * 99 0 * * * * * * 4140 0 0 D 100 * * 540 1680 * * * * * * * * * * * * * * * * 100 0 * * 0 * * * 3973 0 0 //