HHsearch 1.5 NAME c4pbdA_ FAM FILE c4pbdA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4pbdA_.a3m DATE Sat Jan 17 08:19:53 2015 LENG 102 match states, 102 columns in multiple alignment FILT 115 out of 506 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.8 EVD 0.4063 -1.5011 SEQ >ss_dssp CCCCCCCCCBCCCEEEEECSSEEEEEEECTTCSCSCCEEEEEEEEEEEEETTEEEEEEEEEEECCSSCCEEEEETTTTEEEEEEEBSSTTCCCCCGGGCC CC >sa_dssp EEEEEEEEEDEBDCECDCDEECACACADADECEDEECECECEBDCACADBECBCADADBDBDBCEEEDDDEEDDEEEBDBCBCABBDDEEDEAEDBEECE CE >ss_pred CCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCHHHEEEEEECCEEEEEEECEEEEEECCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCC CC >ss_conf 9742254001442798988985999999079877676999969989999813078765366323467514899820787999985066674657764000 39 >Consensus xxxxxxxxxltPxxxixexxxxvxvxvxlPgvxxxdixixixxxxlxixxxxYxlxlxLpxxVxdxxxxxAxxxxxxgxLxItLpKxxxgexxxxLdxxx xl >c4pbdA_ AHHHHHHKXLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGSDFKFYAKPYFLRLTLPGRIVENGSEQGSYDADKGIFTIRLPKETPGQHFEGLNXLT AL >UniRef50_C7DHB3(62-165:165) Heat shock protein Hsp20 n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHB3_9EURY E=5e-09 s/c=0.60 id=23% cov=82% -----------PEADIVDNGDSLTIKIDMPGVDKKDIKLKVTNTRIIVSAEKnqekeqndkgfysrerssvgYYRAIELPEPVIAAKS-KAKYD--NGTL TIIAdKKDRENEVEPKID----- >UniRef50_Q5VJS0(7-90:434) EKN1 n=3 Tax=Chordata RepID=Q5VJS0_CIOIN E=1e-08 s/c=0.73 id=23% cov=70% ----------------SETKEQIFISVPLKGVRASNVDIMCTPEFIKASYPPFLFEVLLNAPIVDAKSAA---KIRDGCVIFTLIKEIP----------- -- >UniRef50_B6KS60(131-211:270) Nuclear movement domain-containing protein n=6 Tax=cellular organisms RepID=B6KS60_TOXGO E=4e-06 s/c=0.65 id=17% cov=76% ------------VYEWEQSLDEVHLYLKPPeGAKAKDLDIKITPTTLTvgLKGKPPLFSAPTESTVNVDPSV---WMIEDGELHILLVKMKKGEV----- ----- >UniRef50_A6QTA8(125-216:372) Putative uncharacterized protein n=1 Tax=Ajellomyces capsulatus NAm1 RepID=A6QTA8_AJECN E=7e-06 s/c=0.56 id=16% cov=81% -----------------QTHDTVVVTLYAKGVPKEKADIDIQEDSVSVafpmaSGSDFSFNLEPLFSLVDSTASKATVMSTK--IEIILRKKQPGQKWGA LEATST- >UniRef50_C4Q1Z8(112-195:201) Expressed protein n=1 Tax=Schistosoma mansoni RepID=C4Q1Z8_SCHMA E=7e-05 s/c=0.57 id=20% cov=74% ----------TPKYEIIKVKDDVsgevrclVARIIMPKLISSDgLDLQVGADLLQLNSRDqiYSLELPLNTLVNE-ETTVAEFNRNTKILTVTMP----- ------------ >UniRef50_A4U381(64-169:173) Heat shock protein Hsp20 n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U381_9PROT E=0.0001 s/c=0.45 id=17% cov=87% ---------MTPQVDVKELADHYEIDAELPGVEVKDVKVTIDNGMLDIRGEKHGEHMDDQGAVHVSERSFGSFarafrlpedadadtadaEFVNGVLKVK VPKQEgKGPKVKDIE----- >UniRef50_Q5CXC4(29-116:213) p23; HSP20-like chaperones fold (Fragment) n=4 Tax=Cryptosporidium RepID=Q5CXC4_CRYPV E=0.0008 s/c=0.51 id=22% cov=66% -----------------QTKKALFVTVDLPDLK--DYKVELEEQYLKFHAnvenNEYEFRLDFLKPINKEES---RYQV-TRSLHFMITKKEE------- ------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 0 * * * * * * * * * * * * * * * * * * * 1 0 * * * * * * 1678 0 0 H 2 * * * * * * 398 * * * * * * * * * 2052 * * * 2 0 * * * * * * 2648 0 0 H 3 2293 * * * * * 720 * * * * * * 2404 * * * * * * 3 0 * * * * * * 3129 0 0 H 4 * * 2937 * * * 997 * * * * * * 3081 3017 * 2981 * * * 4 0 * * * * * * 4020 0 0 H 5 * * * 3083 * * 2180 * * * * * * * 1185 * 3135 * * 3217 5 0 * * * * * * 4187 0 0 H 6 * * * * 3159 * 1201 * * * * 2176 * * 2109 * * * * * 6 0 * * * * * * 4187 0 0 H 7 * * * 2408 * * 1878 * * * * 1936 * * 3365 * * * * 2465 7 0 * * * * * * 4529 0 0 K 8 * * * 2463 * 3374 * * 1150 * * 3554 * * 3444 * * 3403 * * 8 0 * * * * * * 4529 0 0 X 9 3537 * 3333 3470 * 3434 * 3622 * * * * * * 3367 2487 3521 3455 * 3365 9 0 * * * * * * 4509 0 0 L 10 * * * * * * * 1467 * 1054 4753 * * * * 5204 5446 3843 * * 10 51 * 4861 * * * * 5981 0 0 T 11 3669 * * 4547 * * 5063 3794 5507 5791 5371 * * 4258 4813 4812 822 * * 5429 11 102 5935 4268 1000 1000 * 0 6460 1000 1000 P 12 * * * * 5765 5935 * * * * * * 51 * * * * * * * 12 32 5492 * 2000 415 0 * 7106 1612 2218 A 13 3487 * 3366 3967 5543 7153 6098 4026 2920 5176 6372 6380 4080 3444 3013 4682 4251 3695 * 5799 13 38 * 5248 * * * * 7192 0 0 F 14 4241 * * * 2036 * 4673 5056 * 4520 5231 * * * * 7111 3760 2477 5618 1822 14 17 6455 * 1585 585 * 0 7442 1000 1561 D 15 * * 1625 2378 5786 * 4402 * 4748 6420 * 6581 * 3783 3822 4260 2918 6090 5953 * 15 0 * * * * * 0 7261 0 1561 L 16 4929 4115 * * 7478 * * 1836 * 2005 6246 6327 * * * * 5510 2520 2842 6235 16 16 6495 * 1585 585 0 * 7261 1000 1561 S 17 5712 6708 4848 3093 4406 7298 5065 5067 4596 5696 6721 6296 * 4677 3881 2629 2244 4852 * 3198 17 68 4449 * 924 1081 * * 7485 2577 0 Q 18 4756 * 3398 1440 * * 5443 * 5596 * 6116 6488 * 1460 4950 6565 * 5378 * * 18 13 6797 * 4170 82 * * 7582 1000 0 D 19 6612 5939 2243 2978 * 6822 * * 3875 4512 * 4232 * 6644 5204 2841 1874 6400 * * 19 31 5549 * 2447 292 * * 7582 1532 0 P 20 3415 4985 2562 2432 * 3446 6846 5320 4480 5089 * 4244 2699 5230 6836 3679 * * * * 20 14 6723 * 2322 322 * * 7506 1000 0 D 21 5788 * 1651 2079 * 4242 6208 * 3937 6551 * 4752 6244 5381 6874 3531 3206 7173 * * 21 34 5422 * 1089 916 * * 7527 2228 0 F 22 2733 6914 3396 2393 3447 6044 3222 6415 4278 * 5452 4564 * 5445 4770 4017 4865 * 5585 4755 22 10 7213 * 1000 1000 * * 7527 1000 0 L 23 * * * * 4484 * * 2253 * 2146 4867 * * * * * 7069 1448 6340 3338 23 16 6467 * 2807 222 * * 7544 1000 0 T 24 6132 5952 * 4372 4254 5604 4106 3010 5558 4031 5650 5763 * 6340 5132 6030 3020 1719 * 4005 24 0 * * * * * * 7544 0 0 I 25 3958 * * * 5283 * * 1783 * 2179 * * * * * * * 1379 * 6132 25 0 * * * * * * 7544 0 0 A 26 4690 * 4765 3164 6415 * 4625 4892 2957 6053 7146 5176 * 5952 2994 3261 2154 4639 * 4736 26 0 * * * * * * 7544 0 0 I 27 2589 6869 * * 4609 * * 1618 * 3743 5671 * * * * * 7164 1486 * * 27 0 * * * * * * 7544 0 0 R 28 5671 7073 2793 2072 4367 * 5121 5581 2866 4672 7022 5656 3983 5080 3632 6577 4706 4849 * 4972 28 13 6850 * 2585 263 * * 7544 1000 0 V 29 4545 4729 * * 5527 * * 2709 * 1100 3079 * 6518 * * * * 2745 * * 29 70 5276 5521 0 * * * 7544 1793 0 P 30 4862 * * * * * * * 2906 6575 * * 430 * 5927 3987 * * * * 30 127 3571 * 666 1436 909 1097 7498 4020 1760 Y 31 6371 * 4759 6177 5567 835 5805 * 4870 4744 5676 3071 * 6372 6015 4620 * 5969 * 4529 31 48 4939 * 739 1319 0 * 7546 2626 1000 A 32 3159 4838 * 5066 4950 6182 5459 3611 * 2679 4130 * * 6044 * 5370 3419 1615 * * 32 93 4441 5954 0 * * * 7544 2539 0 R 33 6171 * 3371 3963 * 5215 5898 5315 1952 * * 4501 4962 5464 2306 3032 3972 6535 * * 33 53 4797 * 559 1638 0 * 7505 2622 1000 V 34 2551 * 6552 3778 4368 6970 7025 4703 2381 4919 3654 * 3199 7264 5274 3772 4572 3603 * * 34 24 5914 * 701 1378 * * 7544 1635 0 S 35 3946 * 3818 1867 * 4595 5985 8134 2491 6623 5500 4221 * 4138 * 2325 6751 * * * 35 80 4558 6472 1870 461 * * 7544 2626 0 E 36 4869 * 1200 3107 * 4585 * * 3497 6850 6582 2924 * 5458 6878 3992 5391 6014 * * 36 80 4205 * 1180 840 * 0 7529 2993 1000 F 37 3752 4701 * 5372 4778 * * 1847 * 2122 4716 * 5969 * * * * 2023 * 5710 37 11 7107 * 1000 1000 0 * 7529 1000 1000 D 38 4727 * 1870 1862 * * 6042 6853 3561 * * 3631 * 3553 7114 4055 5283 4437 * * 38 0 * * * * * * 7544 0 0 V 39 6404 5814 * * 4579 * * 1754 * 1807 5792 * * * * * * 1608 * * 39 0 * * * * * * 7544 0 0 Y 40 5971 * 2169 3407 4820 6623 6020 7111 3894 5363 6481 4787 * 4152 5361 2970 3000 3344 * 5126 40 12 6872 * 0 * * * 7544 1000 0 F 41 4356 6481 * 6921 3892 * * 1778 * 3127 4687 * * * 6240 5954 5312 1599 * 4843 41 0 * * * * * * 7544 0 0 E 42 3928 * 3035 2437 * 4150 5011 * 4591 5386 5748 4384 * 4005 4925 3094 2608 6091 * 5846 42 0 * * * * * * 7582 0 0 G 43 5077 * 2362 2356 * 2671 * * 4467 6318 * 3062 3289 4629 5305 4328 6482 5877 * * 43 0 * * * * * * 7582 0 0 S 44 5304 * 2471 4496 * 3893 * * 3528 3800 * 2801 6434 3285 3988 4637 3084 4709 * 7095 44 18 6351 * 2585 263 * * 7582 1000 0 D 45 4343 5543 4792 4262 4198 6700 5686 3644 4929 4701 5074 4050 * 4035 3376 3313 3126 3448 * 4262 45 8 7525 * 1000 1000 * * 7582 1000 0 F 46 5814 * * * 2722 * * 3334 * 960 5128 * * * * * * 2404 * * 46 47 4975 * 3603 124 * * 7470 2434 0 K 47 * * 4108 4165 7172 4667 3928 3702 2745 5185 * 4565 * 5354 5147 3144 2373 3730 6779 4825 47 53 4806 * 3798 108 * * 7470 2572 0 F 48 5934 * * * 2893 * * 1683 * 2168 5040 * * * * 6266 * 1963 * 6049 48 44 5064 * 3515 132 * * 7377 2376 0 Y 49 5999 * 5774 4674 5221 7193 3445 4776 3648 6405 * 3251 * 4593 2609 2526 3520 3955 * 4731 49 56 4721 * 2533 274 * * 7377 2601 0 A 50 1735 4686 * * 5443 2299 * 4896 5190 4233 * * * 6009 * 2192 5473 4476 * 5765 50 120 3644 * 2535 273 * * 7377 4274 0 K 51 5189 * 4324 2011 6257 4963 4774 * 2873 6497 * 4159 2386 6868 4179 3424 4932 6916 * * 51 253 2637 * 3470 136 * * 7377 5008 0 P 52 4278 * 3798 5885 * 5620 5017 6622 2186 * * 4405 1885 4296 2610 5879 6404 5883 * * 52 260 2602 * 3413 142 * * 7379 5062 0 Y 53 * * * * 2514 * 5425 * 3638 5614 * * 4467 * 6685 6770 * * 6325 679 53 69 4425 * 3285 156 * * 7379 2951 0 F 54 6548 * 5879 3553 3347 6255 4485 5454 4048 2983 5430 * * 5797 3016 3508 * 3875 * 2318 54 29 5646 * 2631 254 * * 7379 1938 0 L 55 6910 * * 5056 3664 5255 7152 * 4104 860 * * * 5859 2756 4789 7387 6799 6116 6712 55 13 6811 * 2585 263 * * 7379 1000 0 R 56 4314 * 4124 2742 * 6340 4094 5543 3684 5324 * 3754 6004 3673 2600 3128 4681 4302 * 6548 56 37 5305 * 2838 217 * * 7379 2123 0 L 57 4593 * * * 3371 4518 4628 2215 * 1385 5456 * 6901 7036 5503 * 5138 3632 * 6685 57 0 * * * * * * 7379 0 0 T 58 4364 * 2730 3863 5387 * 4644 4253 3443 4445 7127 5950 3573 4759 3364 3435 3302 6004 * 5219 58 11 7048 * 1585 585 * * 7379 1000 0 L 59 * * 6255 * 2650 * * 4204 * 642 6721 * 5206 * 4830 * 4596 5673 * * 59 41 * 5167 * * * * 7379 0 0 P 60 4173 * 4627 6438 3869 4888 6158 * 4683 3861 * 5497 876 5108 * 4554 6780 * * 5574 60 25 * 5880 * * 0 * 7374 0 2233 G 61 3930 4893 4763 4802 3275 3270 2508 6675 4938 6405 6753 4592 * 3176 6119 4864 5136 4317 * 3290 61 49 * 4917 * * 0 * 7336 0 1672 R 62 4131 6456 4358 2902 * 5498 6907 * 3442 5649 * 4763 1844 5376 4090 2896 4320 6138 * 6670 62 12 * 6941 * * 412 2008 7354 0 2564 I 63 5519 6696 7034 * * 6687 * 1792 * 3073 * * * * * 5645 6394 967 * * 63 561 4053 1934 2387 306 1000 1000 7340 3021 1562 V 64 4068 * 3182 6272 6186 4685 5917 3011 4086 3662 * 3602 * 4443 4068 * 5598 1957 * 5646 64 92 * 4022 * * 337 2262 7221 0 5722 E 65 5243 * 1193 2718 6171 5664 4767 6816 3975 * * 6433 4663 7358 4529 4107 6722 3764 * * 65 64 * 4519 * * 1205 820 7226 0 4300 N 66 4183 6063 1669 3402 6411 3947 6462 6660 * 4911 * 4634 2851 4862 5978 3716 4367 4792 * * 66 46 6566 5566 0 * 574 1606 7281 1000 4268 G 67 5961 * 2379 1813 6568 3576 * 5939 2595 * * 4169 5268 6388 4900 4331 4206 * * * 67 119 6468 3874 3907 100 675 1419 7299 1000 3068 S 68 3562 5610 5542 3615 * 3607 6634 5248 4075 4847 6492 3768 5926 5421 3488 1925 4035 5549 * 5640 68 134 5085 4077 2334 319 338 2261 7343 1654 3717 E 69 2490 6036 6692 2937 * 2818 * 3646 5075 * * * 5319 4762 5319 2492 4899 3096 * * 69 51 * 4844 * * 1337 727 7313 0 3592 Q 70 3147 5906 4168 4659 4988 * 4500 * 2696 * * 3698 6512 4269 4609 2924 2645 4292 * 5535 70 148 * 3357 * * 2938 202 7299 0 3512 G 71 398 6224 * * 6192 5240 * 5703 5322 6287 * 6342 * 5768 * 6247 5703 4157 * 6444 71 13 * 6819 * * 1157 858 7181 0 4917 S 72 4695 6537 * 3740 4714 * * 5733 1871 * 6285 5430 * 3450 4177 2535 2840 5460 5176 * 72 119 * 3658 * * 1734 516 7282 0 4069 Y 73 3049 5004 6240 * 2233 * * 4172 * 5732 * * * * 5358 * 6502 4704 2791 1601 73 231 6055 2911 4087 87 1572 592 7235 1000 4669 D 74 * * 2158 2921 6481 5911 4618 3774 3920 4815 5250 2578 6203 6379 6416 3694 3708 5976 * * 74 123 * 3613 * * 1131 880 7217 0 4940 A 75 5497 6115 * 6211 4136 * 4738 3102 2814 2594 5034 5008 5079 * 4889 3204 3921 4428 * 3549 75 35 6285 6527 2807 222 672 1425 7368 1000 4404 D 76 4640 * 2276 2834 * 4823 * * 1946 4733 * 5016 * 4085 4166 4282 4148 5189 * * 76 59 * 4646 * * 228 2777 7389 0 3422 K 77 5240 * 2104 4342 * * 6530 * 3866 5555 * 2061 * 5282 4119 2860 3026 7058 * * 77 31 6486 6625 0 * 1726 519 7258 1000 2282 G 78 5554 5300 5809 3884 5891 895 6661 * 3899 * * 4454 * 5405 4999 4041 4272 6417 * 6429 78 15 6556 * 0 * * 0 7252 1000 2418 I 79 * 3875 6351 3924 4819 * * 2505 3371 3886 5443 * * 6168 5144 3705 3051 2216 * * 79 0 * * * * 0 * 7252 0 2418 F 80 * * * 5171 5438 * 5950 4175 * 387 * * * * * * * 3144 * * 80 0 * * * * * * 7342 0 0 T 81 5626 * 5931 2007 * * 3502 4997 4301 6934 * 4926 * 5136 3491 4036 1993 4023 * 6370 81 24 5899 * 2000 415 * * 7342 1000 0 I 82 6116 6540 * * 4472 * * 1332 * 2945 * * * * * * * 1312 * * 82 0 * * * * * * 7342 0 0 R 83 * * * 5232 * * 5759 3889 3058 6390 * 4312 * * 3305 3644 1150 5124 * 4482 83 16 6497 * 3700 115 * * 7342 1000 0 L 84 5129 * * * 4164 * * 3190 * 652 3728 * * * * * * 3557 * 6736 84 9 7342 * 0 * * * 7347 1000 0 P 85 3854 * 6313 5497 6703 * 5552 5394 3660 6475 * 5860 839 4490 3774 6712 5550 5242 * * 85 0 * * * * * * 7318 0 0 K 86 * * * * * * * 6186 212 * 5096 * 6606 * 4101 * * 5321 * * 86 24 5910 * 2000 415 * * 7050 1000 0 E 87 2099 * 6864 2507 * * * 5373 2363 6498 4644 * * 5865 3568 4363 4270 3177 * * 87 16 6524 * 3585 126 * * 7040 1000 0 T 88 * * 5103 1871 * * 4298 4760 3927 * * 3208 * 3100 3898 4356 2879 3890 * * 88 108 5480 4322 0 * * * 6923 1000 0 P 89 4790 * 5667 2557 * 5851 6035 * 2351 * * 5629 1509 5688 3254 4901 * 5917 * * 89 32 * 5493 * * 592 1570 6840 0 2069 G 90 3618 * 5159 3949 * 665 * * 3766 * * 4172 * * * 3920 * * * * 90 87 4937 5267 0 * 886 1124 6683 1000 1681 Q 91 5431 * 5018 1283 * 5517 5025 4948 3605 4156 * * 4038 2290 5372 * * 5483 * * 91 0 * * * * 894 1114 6558 0 1631 H 92 * * 4129 3721 4174 * 1644 * 3290 4034 4685 * * * 4713 * 5035 2378 * 5131 92 0 * * * * * 0 6242 0 1000 F 93 * * * 4605 1198 * * * * * * * * * * * * 4131 1102 * 93 0 * * * * * 0 5771 0 1000 E 94 * * 3106 1566 * 4655 * * 4131 * * * 1581 * * * 3118 * * * 94 0 * * * * 0 * 5771 0 1000 G 95 3730 * 1755 2673 * 3793 * * 3216 4438 * 3692 * * 3721 4815 4134 * * * 95 0 * * * * * * 5768 0 0 L 96 * * * * * * * 2911 * 304 * 4134 * * * * * * * * 96 0 * * * * * * 5768 0 0 N 97 * * 878 1470 * * * * * 4347 * 4454 * * * * * * * * 97 0 * * * * * * 5149 0 0 X 98 2224 * * * 3694 * * * * 1861 2719 2881 * 3505 * * * 4113 * * 98 0 * * * * * * 4308 0 0 L 99 4266 * * * * * * 2862 * 1392 * * 2023 * * * 3278 3635 * * 99 0 * * * * * * 4369 0 0 T 100 2066 * * * * 3390 * * * * * 3354 * * * 2919 1198 * * * 100 0 * * * * * * 3751 0 0 A 101 3433 * * * 3354 * * * 2151 * * * * 3402 3390 * 2156 * * 2555 101 0 * * * * * * 3751 0 0 L 102 * * * * * * * * * 0 * * * * * * * * * * 102 0 * * 0 * * * 3325 0 0 //