HHsearch 1.5 NAME c4p1wA_ FAM FILE c4p1wA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4p1wA_.a3m DATE Sat May 10 08:13:36 2014 LENG 72 match states, 72 columns in multiple alignment FILT 7 out of 11 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.6 EVD 0.4507 1.2361 SEQ >ss_dssp CCTTSCCCCCCCSCCCCCCCCCCCCCCHHHHHHHHHHHHHC------------------------------- >sa_dssp ECDDECEEEEEEEEDEEEDEEDEDDDDECBDCDCDDEDDDE------------------------------- >ss_pred CCCCCEEEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >ss_conf 987750899996660487588851535077899999985431000111100000000000000002111369 >Consensus MNsxNTiVYVkVkGkeGFVdPpxFeWnxxkerxLWsxiSkLxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx >c4p1wA_ MNSENTIVYVRVAGRNGFVDPLKFYWDLERDRSLWSSVSKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX >UniRef50_Q12092(3-45:213) Autophagy-related protein 29 n=5 Tax=Saccharomyces cerevisiae RepID=ATG29_YEAST E=2e-06 s/c=1.23 id=55% cov=58% MNSTNTVVYIKVKGRrpQGFLDPPKFEWNGTKERQLWTMVSNL------------------------------- >UniRef50_Q6CTU8(1-43:154) Autophagy-related protein 29 n=1 Tax=Kluyveromyces lactis RepID=ATG29_KLULA E=4e-05 s/c=1.15 id=52% cov=58% MNNDNTKVYVRVAGKrpENFVETKPFIWDSRRDKILWTKISKI------------------------------- >UniRef50_Q75F26(1-43:172) Autophagy-related protein 29 n=1 Tax=Eremothecium gossypii RepID=ATG29_ASHGO E=7e-14 s/c=1.82 id=57% cov=58% MNSKNTIVYVKVPGrqREGFVDPPPFEWNQHQDRKLWAHISTI------------------------------- >UniRef50_C5DXT9(1-43:197) ZYRO0F07744p n=1 Tax=Zygosaccharomyces rouxii RepID=C5DXT9_ZYGRO E=3e-13 s/c=1.77 id=52% cov=58% MNNQNTVVYVKLKGKrpEGFINPPKFEWNLDKERQLWAIVSKL------------------------------- >UniRef50_Q6FK11(1-43:217) Autophagy-related protein 29 n=1 Tax=Candida glabrata RepID=ATG29_CANGA E=8e-13 s/c=1.75 id=55% cov=58% MNSKNTIVYVKVKGKrpDGFVDPPVFEWNIQKEKKLWSLLSQL------------------------------- >UniRef50_A7TH64(1-43:208) Autophagy-related protein 29 n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=ATG29_VANPO E=2e-12 s/c=1.72 id=52% cov=58% MDNSNTAIYIRVKGQrpKGFVDPLPFEWNLEKEKRLWSIISTL------------------------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 2005 0 0 N 2 * * 2709 * * * * * * * * 239 * * * * * * * * 2 0 * * * * * * 2005 0 0 S 3 * * * * * * * * * * * 1098 * * * 908 * * * * 3 0 * * * * * * 2005 0 0 E 4 * * 2492 2903 * * * * 1919 * * * * 2875 * 2709 2890 * * * 4 0 * * * * * * 2005 0 0 N 5 * * * * * * * * * * * 0 * * * * * * * * 5 0 * * * * * * 2005 0 0 T 6 * * * * * * * * * * * * * * * * 0 * * * 6 0 * * * * * * 2005 0 0 I 7 2709 * * * * * * 1329 2492 * * * * * * * * 1883 * * 7 0 * * * * * * 2005 0 0 V 8 * * * * * * * 2709 * * * * * * * * * 239 * * 8 0 * * * * * * 2005 0 0 Y 9 * * * * * * * * * * * * * * * * * * * 0 9 0 * * * * * * 2005 0 0 V 10 * * * * * * * 1797 * * * * * * * * * 490 * * 10 0 * * * * * * 2005 0 0 R 11 * * * * * * * * 901 * * * * * 1106 * * * * * 11 0 * * * * * * 2005 0 0 V 12 * * * * * * * * * 2875 * * * * * * * 211 * * 12 0 * * * * * * 2005 0 0 A 13 1683 * * * * * * * 846 * * * 2919 * * * * * * * 13 0 * * * * * * 2005 0 0 G 14 * * * * * 0 * * * * * * * * * * * * * * 14 205 2919 * 1000 1000 * * 2005 1000 0 R 15 * * * * * * * * 1164 * * * * 2709 1319 * * * * * 15 1911 446 * 1000 1000 * * 2005 1919 0 N 16 * * 2920 1164 * * * * 2709 * * 2903 * 2890 * * * * * * 16 0 * * * * * * 2005 0 0 G 17 * * * * * 282 * * * * * 2492 * * * * * * * * 17 0 * * * * * * 2005 0 0 F 18 * * * * 0 * * * * * * * * * * * * * * * 18 0 * * * * * * 2005 0 0 V 19 * * * * * * * 2875 * 2890 * * * * * * * 456 * * 19 0 * * * * * * 2005 0 0 D 20 * * 544 2492 * * * * * * * 2875 * * * * * * * * 20 0 * * * * * * 2005 0 0 P 21 * * * * * * * * * * * * 282 * * * 2492 * * * 21 0 * * * * * * 2005 0 0 L 22 * * * * * * * * 2492 1802 * * 901 * * * * * * * 22 0 * * * * * * 2005 0 0 K 23 * * * * * * * * 1304 * * * 1111 * * * * 2920 * * 23 0 * * * * * * 2005 0 0 F 24 * * * * 0 * * * * * * * * * * * * * * * 24 0 * * * * * * 2005 0 0 Y 25 * * * 538 * * * 2492 * * * * * * * * * * * 2903 25 0 * * * * * * 2005 0 0 W 26 * * * * * * * * * * * * * * * * * * 0 * 26 0 * * * * * * 2005 0 0 D 27 * * 1683 * * * * * * * * 538 * * * * * * * * 27 0 * * * * * * 2005 0 0 L 28 * * * * * 2890 * 2920 * 1241 * * * 2919 * 2492 * * * * 28 0 * * * * * * 2005 0 0 E 29 * * 2875 1802 * * 2919 * * * * * * 2920 2492 * 2890 * * * 29 0 * * * * * * 2005 0 0 R 30 * * * * * * * * 846 * * * * 2919 1683 * * * * * 30 0 * * * * * * 2005 0 0 D 31 * * 1172 846 * * * * * * * * * * * * * * * * 31 0 * * * * * * 2005 0 0 R 32 * * * * * * * * 1111 * * * * * 897 * * * * * 32 0 * * * * * * 2005 0 0 S 33 * * * * * * * 2492 1919 * * * * 1883 2709 2903 * * * * 33 0 * * * * * * 2005 0 0 L 34 * * * * * * * * * 0 * * * * * * * * * * 34 0 * * * * * * 2005 0 0 W 35 * * * * * * * * * * * * * * * * * * 0 * 35 0 * * * * * * 2005 0 0 S 36 1897 * * * * * * * * * * * * * * 1256 1677 * * * 36 0 * * * * * * 2005 0 0 S 37 * * * * * * 2919 1790 2492 2920 2890 * * * * 2903 * * * * 37 0 * * * * * * 2005 0 0 V 38 * * * * * * * 1111 * 2920 * * * * * * * 1304 * * 38 0 * * * * * * 2005 0 0 S 39 * * * * * * * * * * * * * * * 0 * * * * 39 0 * * * * * * 2005 0 0 K 40 * * * * * * * * 1159 * * 2890 * 2920 * * 1810 * * * 40 0 * * * * * * 2005 0 0 L 41 * * * * * * * 1690 * 535 * * * * * * * * * * 41 0 * * * * * * 2005 0 0 X 42 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 42 * * * * * * * 1000 0 0 X 43 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 43 * * * * * * * 1000 0 0 X 44 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 44 * * * * * * * 1000 0 0 X 45 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 45 * * * * * * * 1000 0 0 X 46 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 46 * * * * * * * 1000 0 0 X 47 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 47 * * * * * * * 1000 0 0 X 48 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 48 * * * * * * * 1000 0 0 X 49 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 49 * * * * * * * 1000 0 0 X 50 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 50 * * * * * * * 1000 0 0 X 51 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 51 * * * * * * * 1000 0 0 X 52 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 52 * * * * * * * 1000 0 0 X 53 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 53 * * * * * * * 1000 0 0 X 54 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 54 * * * * * * * 1000 0 0 X 55 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 55 * * * * * * * 1000 0 0 X 56 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 56 * * * * * * * 1000 0 0 X 57 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 57 * * * * * * * 1000 0 0 X 58 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 58 * * * * * * * 1000 0 0 X 59 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 59 * * * * * * * 1000 0 0 X 60 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 60 * * * * * * * 1000 0 0 X 61 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 61 * * * * * * * 1000 0 0 X 62 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 62 * * * * * * * 1000 0 0 X 63 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 63 * * * * * * * 1000 0 0 X 64 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 64 * * * * * * * 1000 0 0 X 65 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 65 * * * * * * * 1000 0 0 X 66 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 66 * * * * * * * 1000 0 0 X 67 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 67 * * * * * * * 1000 0 0 X 68 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 68 * * * * * * * 1000 0 0 X 69 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 69 * * * * * * * 1000 0 0 X 70 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 70 * * * * * * * 1000 0 0 X 71 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 71 * * * * * * * 1000 0 0 X 72 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 72 0 * * 0 * * * 1000 0 0 //