HHsearch 1.5 NAME c4owtB_ FAM FILE c4owtB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4owtB_.a3m DATE Sat Apr 19 22:52:14 2014 LENG 72 match states, 72 columns in multiple alignment FILT 28 out of 32 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.7 EVD 0.4297 0.6640 SEQ >ss_dssp CCGGGCCEEEEEEECCCEEEEEETTEEEEEECCHHHHHHCCTTEEEECCCBCCCCEEEEESCCCCCCCSBCC >sa_dssp EDAEEDCDBBBCEDEECDBCAABEBAAACACBEEEDBEEBDDCBBBDCEDCEEECDDDCEEECEDCDEEDCD >ss_pred CCCEEEEEEEEECCCCEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEEECCEEEEEEEEEEEEEEECCCCC >ss_conf 911038899998067407996186316999972776274046528999503304899613899865134679 >Consensus xxxxdixxfIVLexgVrtxkVADxTgsInxsvWdexgxxixpGDIirlxxxyxxlxKiGEFcMvFxExpNxS >c4owtB_ TFVKDILIFIVLETGVRTCKVADKTGSINISVWDDVGNLIQPGDIIRLLTLYTDLQKIGEFCMVYSEVPNFS >UniRef50_C4Q6A7(24-113:138) Ob fold nucleic acid binding protein, putative n=2 Tax=Schistosoma mansoni RepID=C4Q6A7_SCHMA E=1e-09 s/c=0.71 id=58% cov=92% -------VFIVLELGpitrtkdgneVRTAKVADRTGTINISVWNENSSLIAPCDVLQLVQgnttvrggclnlnvgRYGQLMKIGEFCFPFVESPDFS >UniRef50_Q54X41(19-107:183) SOSS complex subunit B homolog n=1 Tax=Dictyostelium discoideum RepID=SOSSB_DICDI E=6e-09 s/c=0.70 id=55% cov=92% -------VFIVLDKGPPTKKkegtiyqvlVADSTASINMTVWDALGEQIQPGDILRLKGGYSNiyiellnlyvgktgiIEKIGEFTFPFVEAPNLS >UniRef50_A9SSA5(13-104:148) Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SSA5_PHYPA E=9e-14 s/c=0.85 id=49% cov=93% ------LTFIVLEKGplsrigengplVSVALVADATAAVHLQLWGPECDAFQPGDIVRItngvfsfhktnLVLRagkkGQLEKIGEFTMVFSENVNMS >UniRef50_Q17749(19-109:137) Putative uncharacterized protein n=3 Tax=Caenorhabditis RepID=Q17749_CAEEL E=6e-12 s/c=0.79 id=45% cov=89% ---------IVLDPGIHrrtqtgtiiSMKVADASGSINASIMNpEFNETFKPGDILKFRGAYTSIyqggltlsvgksgecKKVGEFMMVFSETPDIS >UniRef50_A5BEN8(105-192:223) Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BEN8_VITVI E=6e-10 s/c=0.74 id=42% cov=90% --------FIILDKGKMTLEgkyktcltlVADETAAVHFQMWGDECDAFEGGDIIRLVdgifsynrnnlvlraGKKGKAEKVGEFCMAFVETPNMS >UniRef50_A8X3D9(53-128:186) Putative uncharacterized protein n=2 Tax=Caenorhabditis briggsae RepID=A8X3D9_CAEBR E=5e-07 s/c=0.73 id=42% cov=82% --------------SVYTLRVADISGSINATIMyPDYTERFDPGDILKIKNasgvvhqsrlqlgvnyrMNGECKKSGEFCMIFNELPNFS >UniRef50_C4WVN8(17-121:177) ACYPI004613 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WVN8_ACYPI E=2e-16 s/c=0.83 id=49% cov=101% TLIKDIqnnvnnitVMCIVLEVNpavqlkdnheVRTVKVADSSACINFSVWDEPGSFLYPGDIIRVhrayaiyfrncltlyVGKNGEIEKIGDFIMTFNE SVNMS >UniRef50_D2VCX2(250-341:778) Phosphoinositide-binding protein n=1 Tax=Naegleria gruberi RepID=D2VCX2_NAEGR E=4e-12 s/c=0.79 id=40% cov=76% ------------------FVVADDTAYITLTLWNHKADYIVGGDIIRIIGAQTQLWqkncinlttsrnanisRVGEYCMVFNESKNIS # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * T 1 * * * * * * * * * * * * * * * * 0 * * * 1 0 * * * * * * 1414 0 0 F 2 * * * * 482 * * * * 1817 * * * * * * * * * * 2 0 * * * * * * 1544 0 0 V 3 * * * * * * * 310 * * * * * * * * * 2370 * * 3 0 * * * * * * 1544 0 0 K 4 * * * * * * * * 268 * * * * * 2559 * * * * * 4 0 * * * * * * 1544 0 0 D 5 * * 0 * * * * * * * * * * * * * * * * * 5 0 * * * * * * 1544 0 0 I 6 * * * * * * * 312 * * * * * * * * * 2363 * * 6 1545 605 * 3000 193 * * 1662 1500 0 L 7 * * * * * * * 4409 * 1095 * * * * * * * 1044 * * 7 0 * * * * * * 2288 0 0 I 8 * * * * * * * 1614 * * 3779 * * * * * 2340 1311 * * 8 0 * * * * * * 2408 0 0 F 9 * 2991 * * 194 * * * * * * * * * * * * * * * 9 0 * * * * * * 2526 0 0 I 10 * * * * * * * 0 * * * * * * * * * * * * 10 0 * * * * * * 2612 0 0 V 11 * * * * * * * 2894 * * * * * * * * * 208 * * 11 0 * * * * * * 2612 0 0 L 12 * * * * * * * 3915 * 99 * * * * * * * * * * 12 0 * * * * * * 2612 0 0 E 13 * * 1163 854 * * * * * * * * * * * * * * * * 13 0 * * * * * * 2612 0 0 T 14 * * * * * * * 1467 2149 3686 * * 3678 * * * 4833 2172 * * 14 0 * * * * * * 2612 0 0 G 15 * * * * * 291 * * * * * 4176 * * * 2975 * * * * 15 1746 511 * 3332 151 * * 2601 2314 0 V 16 * * * * * * * 3244 3875 * * * 4170 * * * * 376 * * 16 0 * * * * * * 2737 0 0 R 17 * * * * * * 4077 * * * 3875 * 4170 * 545 3935 * * * 3916 17 88 4077 * 3170 170 * * 2737 1000 0 T 18 * * * * * * * * * * * 3159 * * * 2000 804 3935 * * 18 0 * * * * * * 2737 0 0 C 19 3010 1911 * * 2270 * * 4117 4251 2987 4183 * * * * * * 3167 * * 19 0 * * * * * * 2828 0 0 K 20 * * * 3967 * * * * 782 4113 * * * * 2098 * * 3983 * * 20 179 3102 * 3170 170 * * 2828 1443 0 V 21 * * * * * * * * * * * * * * * * * 0 * * 21 0 * * * * * * 2860 0 0 A 22 180 * * * * 3392 * * * * * * 5517 * * * * * * * 22 0 * * * * * * 2891 0 0 D 23 * * 0 * * * * * * * * * * * * * * * * * 23 0 * * * * * * 2891 0 0 K 24 3470 * 3985 2948 * * 4980 4078 2237 * * * 3073 4615 2754 3238 * * * * 24 0 * * * * * * 2891 0 0 T 25 * * * * * * * * * * * * * * * 1713 525 * * * 25 0 * * * * * * 2893 0 0 G 26 1048 * * * * 954 * * * * * * * * * * * * * * 26 0 * * * * * * 2893 0 0 S 27 2293 3424 * * * * * * * * * * * * * 791 3947 * * 4057 27 0 * * * * * * 2893 0 0 I 28 4421 * * * * * * 544 * * * * * * * * * 1904 * * 28 0 * * * * * * 2893 0 0 N 29 * * * * * * 2615 * * 4267 * 716 * * * * 2507 * * * 29 0 * * * * * * 2893 0 0 I 30 3239 * * * 2750 * * 1839 * 2676 2957 * * * * * * 2468 * * 30 0 * * * * * * 2893 0 0 S 31 * 4471 * * * 4267 * * * 4421 * * * 3101 * 778 2674 * * * 31 0 * * * * * * 2893 0 0 V 32 * * * * * * * 1621 * 2439 4686 * * * * * * 1147 * * 32 0 * * * * * * 2893 0 0 W 33 * * * * * * * * * * 3239 * * * * * * * 161 * 33 87 4090 * 0 * * * 2893 1000 0 D 34 * * 1017 * * 2165 * * * * * 2158 4090 * * * * * * * 34 70 4406 * 0 * * * 2893 1000 0 D 35 3564 * 1680 981 * * 4057 * * * * * 4771 * * * * * * * 35 0 * * * * * * 2893 0 0 V 36 * 4684 * 2615 3741 * * 4038 4057 4722 * 3947 2210 * * * * 2948 4834 3077 36 0 * * * * * * 2893 0 0 G 37 4057 3101 * * * 723 * * * * * 4406 * * 4421 3947 4090 * * * 37 0 * * * * * * 2893 0 0 N 38 * * 1861 2544 * 3110 * * 2924 * * 3599 5550 4834 * 2583 * * * * 38 0 * * * * * * 2893 0 0 L 39 2615 5550 * * 3462 * 4063 * * 1602 * 4267 * 3088 4090 * 4406 * * 4057 39 0 * * * * * * 2893 0 0 I 40 * * * * 1894 * * 835 * 2926 4684 * * * * * * * * * 40 0 * * * * * * 2893 0 0 Q 41 3001 * 4090 2981 * * * 5021 4406 4615 * * * 1337 * 4267 * 4057 * 3986 41 0 * * * * * * 2893 0 0 P 42 3426 4684 * * * 2900 * * * * * * 604 5550 * * 4186 * * * 42 0 * * * * * * 2893 0 0 G 43 * 3947 * * * 97 * * * * * * * * * * * * * * 43 0 * * * * * * 2893 0 0 D 44 * * 0 * * * * * * * * * * * * * * * * * 44 0 * * * * * * 2881 0 0 I 45 * * * * * * * 98 * * * * * * * * * 3933 * * 45 0 * * * * * * 2881 0 0 I 46 * * * * * * * 1160 * 1734 * * * * * * * 2329 4241 * 46 0 * * * * * * 2881 0 0 R 47 * * * * * * * * 2431 * * * * 3933 539 4035 * * * * 47 53 4787 * 3459 138 * * 2881 1000 0 L 48 * * * * 3006 * * 2668 * 613 * * * * * * * 3953 * * 48 738 1320 * 3558 128 * * 2881 2112 0 L 49 * * * * * * * 4040 3352 1339 * * * * 3309 * 2510 2560 * * 49 288 2466 * 4203 81 * * 2881 1615 0 T 50 * * * * * 1347 * * 4174 * * 4070 * 3933 4995 * 1481 4757 * * 50 193 3000 * 4001 93 * * 2881 1538 0 L 51 3200 * * * * 2998 * 4787 2331 1478 4070 * * * 3152 * * * * * 51 0 * * * * * * 2881 0 0 Y 52 * * * * 4973 * * * 4666 * 4241 3435 * 4040 2991 * * * * 744 52 140 3436 * 3324 152 * * 2881 1650 0 T 53 4995 * * * * 1110 * * * * * * * * * 2795 1942 3306 * * 53 383 2102 * 2000 415 * * 2881 1753 0 D 54 * * 5426 1410 * 3293 5145 * 3624 * * 4702 * 2615 4410 2833 * * * * 54 218 2832 * 2773 228 * * 2881 1690 0 L 55 3532 4070 * * * * * 2127 * 1264 3141 * * * * * * 3387 * * 55 71 4381 * 3907 100 * * 2881 1000 0 Q 56 * * * 1423 3387 * 3810 * 3217 4241 3933 * * 4660 * * 4035 4586 3440 * 56 90 4040 * 4000 93 * * 2881 1000 0 K 57 * * * * * * * * 259 * * * * * 2606 * * * * * 57 46 4995 * 3907 100 * * 2881 1000 0 I 58 * * * * * * * 1048 * 3839 3681 * * * * 4070 4241 1965 * * 58 0 * * * * * * 2881 0 0 G 59 * * * * * 0 * * * * * * * * * * * * * * 59 0 * * * * * * 2881 0 0 E 60 * * 2419 299 * * * * * * * * * * * * * * * * 60 0 * * * * * * 2881 0 0 F 61 * * * * 141 * * * * * * * * * * * * * * 3420 61 0 * * * * * * 2887 0 0 C 62 * 584 * * 4230 * * 3921 * * 4370 * * * * * 2596 * * * 62 0 * * * * * * 2887 0 0 M 63 * * * * 3255 * * * * * 302 * * * * * * 4574 * 4562 63 0 * * * * * * 2887 0 0 V 64 3614 * * * * * * 3004 * 3506 * * 3255 * * * 3206 1022 * * 64 0 * * * * * * 2887 0 0 Y 65 * * * * 363 * * * * * * * * * * * * * * 2169 65 0 * * * * * * 2887 0 0 S 66 * * * * * * * * * * * 1365 * * * 1404 * 2097 * * 66 0 * * * * * * 2887 0 0 E 67 * * * 0 * * * * * * * * * * * * * * * * 67 0 * * * * * * 2887 0 0 V 68 3820 * * * * * * 5100 * 3314 4562 3220 * * * 2150 2496 2017 * * 68 0 * * * * * * 2887 0 0 P 69 * * * * * * * 4928 4028 4966 * * 523 * * * * 2492 * * 69 0 * * * * * * 2887 0 0 N 70 * * 2504 * * * * * * * * 280 * * * * * * * * 70 0 * * * * * * 2887 0 0 F 71 * * * * 2255 * * 1996 * 4687 1279 * * * * * * 4617 * 4375 71 0 * * * * * * 2887 0 0 S 72 * * * * * * * * * * * * * * * 0 * * * * 72 0 * * 0 * * * 2887 0 0 //