HHsearch 1.5 NAME c4orlA_ FAM FILE c4orlA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4orlA_.a3m DATE Sat Mar 8 08:13:50 2014 LENG 110 match states, 110 columns in multiple alignment FILT 15 out of 19 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.2 EVD 0.4104 -0.7012 SEQ >ss_dssp CCSSCHHHHHHHHHTCHHHHHTTEEEEEEEEETTEEEEEEHHHHHHHHHHHHHHSCEEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEEETTEEEE EEEEEEEECC >sa_dssp ECCBCECABCAADECCBECABDCBBEDACABCEEEDDECDDEEABEDADEBBECBDCECAEDDEDCDEEEDBDABACACBEEBCBDACADACCDEEDBBA DCADBCDCEE >ss_pred CCEEHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEECCCCEEEEEEEEEECCCEEEE EEEEEEECCC >ss_conf 9310136988752178788740367728999818765301577889999987527986048888512576328999984278349999999952983899 8999987069 >Consensus xxdixxxVxxaxkxGnaxxLsxxfxxxVelxixxxxxxySkxQAexiLrxFFxkyxpxxFxvxhxxxxxxxxfxiGxlxtxxgxfrVxxxxxxxxxxxxI xelriekxxx >c4orlA_ GQEIPAGVITAFKRGSSQELSKYXGDKVNLVFQGRSTNVDKQKATAAXQEFFTKNKVSGFNVNHQGKRDESSFVIGTLATTNGNFRVNCFLKKVQNQYLI HQIRIDKINE >UniRef50_C2G4F0(23-131:134) Putative uncharacterized protein n=2 Tax=Sphingobacterium spiritivorum RepID=C2G4F0_9SPHI E=5e-06 s/c=0.48 id=23% cov=97% GQDIAENILSSLRAGNSKDLAKNFASTVSVAVKQEDGVYSKFQAELILNEFFRQNKPSSARIMQKMNSNSSnAYYVFSLKTQREQYRVFTKLIENNDVLY ISEIRFE---- >UniRef50_C0JZX2(25-132:137) Putative uncharacterized protein n=1 Tax=uncultured bacterium URE4 RepID=C0JZX2_9BACT E=4e-21 s/c=0.94 id=21% cov=98% GYDVFVPIGKYISQGDAASLSAWFADNLEVSIISSTRNCSKTQARQIVKTFFDTYTPRSFDISHKASRSNMKYALGQLNAGGEVFIVTLFVSSKaDGTYQ IQQFKIDR--- >UniRef50_D2QTL0(25-133:140) Putative uncharacterized protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QTL0_9SPHI E=2e-20 s/c=0.92 id=25% cov=96% --EISQTVGNSLRSGDAGRLSARFAKTIELVIDTEKvdfQSLQATHAELILRSFFRKYPPHGFQFVYRGSSDRLYYSTGTYETNGQVFSVYVLMRQTNNh QYAINGLHFRK--- >UniRef50_C7PFY9(35-137:139) Putative uncharacterized protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PFY9_CHIPD E=2e-20 s/c=0.97 id=30% cov=91% -------VVTAIKQGDAGALSRYLDNTVEISMAGKSNSYSKAQAEIILKDFFSKNQVKTFELIHQVQSTNGSRVgIANVGTSGGAYRTSFFLQMKGGSMV LNELRFE---- >UniRef50_D0MG74(36-135:142) Putative uncharacterized protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MG74_RHOM4 E=6e-07 s/c=0.55 id=18% cov=90% -------LVEALARGDAARLLEQAPPQVELALLGRGQLYSRMQARYVLMDFFQAYPPLRVKLDEDRLLEPHRFLVGRYWYARAAapFQVYMRLHHEAGTW RLHELRV----- >UniRef50_Q11NQ0(48-154:155) Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11NQ0_CYTH3 E=3e-23 s/c=1.02 id=23% cov=96% --DVIENIRVSIKMANSKELTTFMGDMVEIQLPDQDrNNYSKTQAEFVLRDFMKKYPPTNFTYIHKVlDKEDFKFTIGEYVYAGGSMRITMVIKPSNSKY QIDSIVIER--- >UniRef50_Q2S4T9(44-152:154) Putative uncharacterized protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S4T9_SALRD E=1e-19 s/c=0.90 id=24% cov=93% -------VATAFAEGNARRLLTPSADRVEISLFGNRTFYSSSQAVYVLREFFRRHPSGRFAVGDVMEAGTSFFVRGEYEEARMARRHHVYVRldqpQGKD LWNLHEVRIEHA-- >UniRef50_A1ZQF9(29-135:136) Putative uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZQF9_9SPHI E=1e-19 s/c=0.91 id=24% cov=95% --EITDRVKVALTQSNYHMLSRQFTERVSLSINHENFLYSKTQATFVMREFFRQYPPVNFQYLHQGIMKSGRhYTLGTYKSYGKNYSLAMLLVPHQKDFL IEKLIF----- >UniRef50_A3HU78(67-175:176) Phosphoglyceromutase n=1 Tax=Algoriphagus sp. PR1 RepID=A3HU78_9SPHI E=3e-17 s/c=0.82 id=24% cov=92% -------VVAAIDGNSSSDLARYFESSISLNINGQQGSYSKNQAEIVIKDFFKRNPSQGFSIVYSSETNPSlSSFIGDYVSGDGTFKVFIKVSQQDSSFK IYSLEFVK--- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 1693 * * * * 534 * * * * * * * * * * * * * * 1 0 * * * * * * 2466 0 0 Q 2 * * * * * * * * * * * * * 450 * * * * * 1900 2 0 * * * * * * 2466 0 0 E 3 * * 586 1583 * * * * * * * * * * * * * * * * 3 0 * * * * * * 3517 0 0 I 4 * * * * * * * 610 * * * * * * * * * 1536 * * 4 0 * * * * * * 3517 0 0 P 5 3023 * * * 2877 * * 2056 * * * * 2011 * * 2984 2989 * * * 5 0 * * * * * * 3517 0 0 A 6 3620 * 2989 1460 * * * * * * * * * 2984 * * * 1724 * * 6 0 * * * * * * 3517 0 0 G 7 * * 3128 * * 2011 * * * * * 2005 2877 * 2989 * 2984 * * * 7 0 * * * * * * 3517 0 0 V 8 * * * * * * * 2002 * 2568 * * * * * * * 782 * * 8 0 * * * * * * 4297 0 0 I 9 3450 3715 * * * 2543 * 4227 3619 3646 * * * * 3653 * * 1448 * * 9 0 * * * * * * 4297 0 0 T 10 3613 * * 3435 * * * * 3469 * * 3622 * * * 3646 1836 1764 * * 10 0 * * * * * * 4297 0 0 A 11 681 * * * * * 3816 * * * * * * * * 2163 * * * 3607 11 0 * * * * * * 4407 0 0 F 12 * * * * 1312 * * 1765 * 1723 * * * * * * * * * * 12 0 * * * * * * 4406 0 0 K 13 2563 * 3760 * * * * * 1124 * * * * * 2817 3655 3702 * * * 13 0 * * * * * * 4406 0 0 R 14 2061 * * 3558 * 3760 * * 3319 * 3846 * * 2135 2931 3774 * * * * 14 0 * * * * * * 4406 0 0 G 15 3846 * * * * 359 * * * * * 3760 * * * 3702 * * * * 15 0 * * * * * * 4406 0 0 S 16 * * 1698 * * * * * * * * 943 * * * 2543 * * * * 16 0 * * * * * * 4406 0 0 S 17 963 * * * * * * * * * * * * * * 1286 * * * 3702 17 0 * * * * * * 4406 0 0 Q 18 2611 * * * * 2791 3702 * 2062 * * * * 2766 3558 2801 * * * * 18 0 * * * * * * 4406 0 0 E 19 3808 * 2810 1654 * * * * * * 3702 * * * 2045 2746 * * * * 19 0 * * * * * * 4406 0 0 L 20 * * * * * * * 3304 * 154 * * * * * * * * * * 20 0 * * * * * * 4406 0 0 S 21 2036 * * * * * * * * 2563 * 3319 * * * 1261 3846 * * * 21 0 * * * * * * 4406 0 0 K 22 1979 * * 3569 * 3068 * * 3113 * * * * * 1875 * 2695 * * * 22 0 * * * * * * 4406 0 0 Y 23 3843 * * * 3846 * * * * * * 3071 3558 2634 3774 4294 * * 3655 1775 23 0 * * * * * * 4406 0 0 X 24 3533 * * * 1028 * * * * 2374 2798 * * * * 3528 * * * * 24 0 * * * * * * 4405 0 0 G 25 1708 * 2825 3760 * 2207 * * * * * * 3569 * * 3304 3702 * * * 25 0 * * * * * * 4406 0 0 D 26 * * 1598 2972 * * * * 2808 * * 3808 3569 * * 2036 * * * * 26 0 * * * * * * 4406 0 0 K 27 * * * * * * * * 2766 * 3846 3655 * 3569 2628 2514 2229 3843 * * 27 0 * * * * * * 4406 0 0 V 28 * * * * * * * 2767 * 3655 * * * * * * * 370 * * 28 0 * * * * * * 4406 0 0 N 29 * * 2554 963 * * * * * * * 3360 * * * 2188 * * * * 29 0 * * * * * * 4406 0 0 L 30 * * * * * * * 2146 * 846 * * * * * * * 2199 * * 30 0 * * * * * * 4406 0 0 V 31 2167 * * * * * * 2729 * * * 3760 * 3846 * 1678 * 2552 * * 31 0 * * * * * * 4406 0 0 F 32 * * * * 4416 * * 987 * 1697 3808 * * * * * * 3862 * * 32 0 * * * * * * 4406 0 0 Q 33 3808 * 3774 * 3558 * 4334 2469 3862 3569 * 2731 2844 3360 * * * * * * 33 0 * * * * * * 4406 0 0 G 34 * * 2550 * * 1469 3702 * * * * 3319 * 3862 * 2746 3774 * * * 34 0 * * * * * * 4406 0 0 R 35 * * * 1644 * * * * 3808 * * 3558 * 2802 2112 2746 * * * * 35 0 * * * * * * 4406 0 0 S 36 * * 2854 3304 * 3569 * * 3774 * * 3702 * 3760 3558 2068 2955 * * * 36 222 2809 * 1033 968 * * 4406 1751 0 T 37 * * 3304 4305 3702 2810 * * 3843 * * 2827 * 2668 3655 * 2463 * * * 37 0 * * * * * * 4406 0 0 N 38 * * * * 3558 * * * 3843 2634 * 2027 * * * 1895 * 2556 * * 38 0 * * * * * * 4406 0 0 V 39 4334 2746 * * * * * * * 3774 * * * * * * * 3360 * 665 39 0 * * * * * * 4406 0 0 D 40 * * 2766 * * * * * * * * 3843 * 3774 * 494 * * * * 40 0 * * * * * * 4406 0 0 K 41 3774 * * * * 3843 * * 650 * * * * * 2891 3558 * * * * 41 0 * * * * * * 4406 0 0 Q 42 2534 * * * 3862 * * * * * 3569 3760 * 3360 4334 2693 1742 * * * 42 0 * * * * * * 4406 0 0 K 43 4305 * * 3843 * * 3774 * 4416 * * * * 494 * * 4334 * * * 43 0 * * * * * * 4406 0 0 A 44 0 * * * * * * * * * * * * * * * * * * * 44 0 * * * * * * 4406 0 0 T 45 * * * 841 * * * * * * * * * * 2611 * 3016 2693 * * 45 0 * * * * * * 4406 0 0 A 46 4416 * * * 2772 4305 * 2784 * 2817 * * * 2469 4334 3843 * * * 2563 46 0 * * * * * * 4406 0 0 A 47 3374 * * * * * * 1344 * * 3843 * * * * * 4305 1361 * * 47 0 * * * * * * 4406 0 0 X 48 * * * * * * * 3722 * 503 2860 * * * * * * 3625 * * 48 0 * * * * * * 4405 0 0 Q 49 3319 * * * * * * * 2154 * 3569 3862 * 4416 1302 3843 * * * * 49 0 * * * * * * 4406 0 0 E 50 4305 * 1742 1850 * * * * * * * 2729 * * * 2808 3655 * * * 50 0 * * * * * * 4406 0 0 F 51 * * * * 0 * * * * * * * * * * * * * * * 51 0 * * * * * * 4406 0 0 F 52 * * * * 104 * * * * * 3846 * * * * * * * * * 52 0 * * * * * * 4406 0 0 T 53 4334 * 3655 * * * * * 2802 * * * * 3569 1720 2383 2756 * * * 53 0 * * * * * * 4406 0 0 K 54 3569 * * 4334 * * * * 1465 * * * * 2780 2655 3056 3655 * * * 54 0 * * * * * * 4406 0 0 N 55 * * * * * * 3558 * * * * 1215 * * * * * * * 1046 55 0 * * * * * * 4406 0 0 K 56 4314 * * * * * * * 1809 * * * 1112 3808 * * 2939 * * * 56 0 * * * * * * 4406 0 0 V 57 * * * * * * * * * * * * 683 * * 2655 * 2195 * * 57 0 * * * * * * 4406 0 0 S 58 * * * * * 3558 3774 * 3808 3569 * * * 3011 3655 1809 3846 2968 * * 58 0 * * * * * * 4406 0 0 G 59 * * * * * 1671 * * 3304 * * 2772 * * 2563 2338 3808 * * * 59 0 * * * * * * 4406 0 0 F 60 3062 * * * 423 * * * * * * * * * * 4314 * 3569 * * 60 0 * * * * * * 4406 0 0 N 61 2879 * 3655 3808 * * * * 3569 * * 2766 * 2737 3862 2801 3061 * * * 61 0 * * * * * * 4406 0 0 V 62 * * * * 3774 * * 2172 * 2683 * * * * * * * 1312 * 2772 62 0 * * * * * * 4406 0 0 N 63 * * 3569 * * 3558 * 2387 * 3702 3862 2766 * * * 3655 * 1902 * * 63 0 * * * * * * 4406 0 0 H 64 * * 3558 3569 * * 701 * * * * * * 3862 * * * * * 2767 64 0 * * * * * * 4406 0 0 Q 65 * * 3569 3319 * * 3843 * 2200 3304 * * * 2358 3774 3760 * 3558 * * 65 0 * * * * * * 4406 0 0 G 66 2746 * * * * 1752 * 3304 * * 2702 * * * 3569 3760 * 2827 * * 66 104 3846 * 0 * * * 4406 1000 0 K 67 * * 2844 2655 * * * 3702 2766 3569 * 2556 * 3808 * 2713 * * * * 67 0 * * * * * * 4406 0 0 R 68 2879 * * * * * * * 2844 3569 3702 * * * 2143 2229 3011 * * * 68 0 * * * * * * 4406 0 0 D 69 * * 2184 2701 * 3558 * * 2771 * * 2036 * * * 3655 3808 * * * 69 0 * * * * * * 4406 0 0 E 70 * * 3846 2206 * * * * * * * 2729 1947 * 3774 2780 3558 * * * 70 154 3304 * 0 * * * 4406 1116 0 S 71 * * * * 2550 2754 3569 * * 3774 3655 * * * * 1171 * * * * 71 222 2810 * 0 * * * 4406 1679 0 S 72 3862 * * * 3558 3843 * * 2747 * * * * * 1930 1775 * * * 3774 72 115 3702 * 0 * * * 4406 1000 0 F 73 * * * * 845 * * * * * * * * * 3808 3760 * * * 1746 73 0 * * * * * * 4406 0 0 V 74 3655 * * * 3760 3304 * 3319 * 2699 * * * * * 3774 2772 2299 * 3862 74 107 3808 * 0 * * * 4406 1000 0 I 75 * * * * * * * 1111 * 2678 * * * * 3558 * 3774 2167 * * 75 0 * * * * * * 4406 0 0 G 76 3808 * * * 3862 399 * 4294 * 4314 * * * * * * * * * * 76 0 * * * * * * 4406 0 0 T 77 * * 3760 2695 * * * * 3843 * * 3808 * 3655 3569 2556 1752 * * * 77 0 * * * * * * 4406 0 0 L 78 * * * * * * * * * 1101 * * * * * * * 3808 * 1112 78 0 * * * * * * 4406 0 0 A 79 4416 * * 2662 * 3047 * * 2780 * * 3655 3843 3304 * * 4305 2802 3569 * 79 0 * * * * * * 4406 0 0 T 80 3655 * * 3558 * * * * * * * * * * * 2731 913 * * 2701 80 0 * * * * * * 4406 0 0 T 81 1561 * * * * 2706 * * 3304 * * 3774 * 3862 * 2825 4416 * * 3702 81 0 * * * * * * 4406 0 0 N 82 * * 3760 * * 1433 * * * * * 2342 * * 2071 3843 4294 * * * 82 0 * * * * * * 4406 0 0 G 83 3569 * * 2755 * 909 * * 3702 * 3558 * * 3774 * * * * * * 83 0 * * * * * * 4406 0 0 N 84 2055 * * 3843 * * * * 3304 * * 2159 * 3862 * 3846 3760 2713 * * 84 127 3569 * 1000 1000 * * 4406 1000 0 F 85 * * * * 840 * * * * * 3846 * * * 3558 * * * * 1802 85 0 * * * * * * 4406 0 0 R 86 * * * * * * * 3655 3760 * * * * 3569 707 2737 * * * * 86 0 * * * * * * 4406 0 0 V 87 * * * * * * 3558 3057 * 3702 * * * * * * 3808 629 * * 87 0 * * * * * * 4406 0 0 N 88 3702 * * * 2810 * 3558 * * * * 2206 * * * 2534 2747 * * 2668 88 0 * * * * * * 4406 0 0 C 89 * 2766 * * 3808 * * 2031 * 3655 2116 * * * * * 3862 2662 * * 89 0 * * * * * * 4406 0 0 F 90 * * * * 1748 * * * 2810 2737 * * * * 3569 * 2549 3846 * 3558 90 0 * * * * * * 4406 0 0 L 91 * * * * 3319 * * 3846 * 1522 2520 * * * * * * 2070 * 3843 91 0 * * * * * * 4406 0 0 K 92 * * * * * * 3569 3862 2200 * * * * 3808 1609 2706 * 3702 * * 92 128 3558 * 2000 415 * * 4406 1000 0 K 93 3843 * * 3862 * * 3569 * 2339 * 3808 * 2772 2109 4305 3655 * * * * 93 0 * * * * * * 4406 0 0 V 94 * * * 2699 * 3558 3702 * 2729 * * 3862 * 3760 * 2550 3774 2766 * * 94 119 3655 * 0 * * * 4406 1000 0 Q 95 3569 * 2706 * * 2385 * * 3558 * * 1930 * 2159 * * * * * * 95 0 * * * * * * 4406 0 0 N 96 4314 * 2702 * * 2089 * * 3702 * * 1553 * * * 2802 * * * * 96 110 3774 * 0 * * * 4406 1000 0 Q 97 4314 * 3702 * * * * * 2559 3558 * * * 3060 * 2784 1814 3862 * * 97 0 * * * * * * 4406 0 0 Y 98 3843 * * * 1989 * * * * 3862 3808 * * * * * * * 2563 1438 98 0 * * * * * * 4406 0 0 L 99 3774 * * * 3304 * * 3843 3760 2521 * 3558 * 2747 3569 * * 3047 * 3862 99 0 * * * * * * 4406 0 0 I 100 * * * * * * * 397 * 2055 * * * * * * * * * * 100 0 * * * * * * 4406 0 0 H 101 * * 3846 3702 * * 1913 * * * * 2358 * 2746 * 3862 3304 * * 3760 101 0 * * * * * * 4406 0 0 Q 102 * * * 1284 * 3774 * * 3702 * * * * 2143 * 2231 * * * * 102 0 * * * * * * 4406 0 0 I 103 * * * * 3655 * * 1494 * 1057 * * * * * * * 3558 * * 103 0 * * * * * * 4406 0 0 R 104 * * * 3760 * * 3774 3702 3655 * * * * * 673 * * 3846 * * 104 0 * * * * * * 4406 0 0 I 105 * * * * 1458 * * 858 * * * * * * * * * 3569 * * 105 0 * * * * * * 4406 0 0 D 106 * * 1912 854 * * * * * * * * * * 3448 * * 3486 * * 106 0 * * * * * * 4047 0 0 K 107 * * * * * * 2686 * 841 * * * * * 1803 * * * * * 107 0 * * * * * * 3445 0 0 I 108 796 * * * * * * 2249 * * * * * * * * 2226 * * * 108 0 * * * * * * 1959 0 0 N 109 * * * * * * * * * * * 0 * * * * * * * * 109 0 * * * * * * 1335 0 0 E 110 * * * 0 * * * * * * * * * * * * * * * * 110 0 * * 0 * * * 1335 0 0 //