HHsearch 1.5 NAME c4onsB_ FAM FILE c4onsB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4onsB_.a3m DATE Sat Apr 12 08:17:28 2014 LENG 56 match states, 56 columns in multiple alignment FILT 5 out of 9 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.8 EVD 0.4990 2.8733 SEQ >ss_dssp CTHHHHTHHHHHHHHHCGGGCCCCCCSSTTSCCHHHHHHHHHHHHHHHHHHHHTCC >sa_dssp EEEECEBDEDBEDCCDDDEDEEDEDCEDEEDDBEDDEECEECCEEBDEDDEEEEEE >ss_pred CCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHCC >ss_conf 90467779998888757023201122676541158875099999999999985059 >Consensus dxxyxmtRaqRvRaAMfPetlxxsxqxxxxxxTnvqrLAEPSQlLktAivxLinyQ >c4onsB_ DGQYAMTRAQRVRAAMFPETLIPSTQFDAAHPTNVQRLAEPSQMLKHAVVNLINYQ >UniRef50_UPI00017611EE(56-116:705) PREDICTED: similar to junction plakoglobin n=1 Tax=Danio rerio RepID=UPI00017611EE E=2e-13 s/c=1.26 id=67% cov=102% EAQFSLTRAQRVRAAMFPETLVEGEtvltpQSNPDQPTNVQRLAEPSQLLKTAIVHLINYQ >UniRef50_P14923(71-134:745) Junction plakoglobin n=103 Tax=Metazoa RepID=PLAK_HUMAN E=3e-07 s/c=0.88 id=59% cov=100% DLEYQMSttaRAKRVREAMCPgvsgedSSLLLATQVE-GQATNLQRLAEPSQLLKSAIVHLINYQ >UniRef50_P30998(71-130:738) Junction plakoglobin n=13 Tax=Euteleostomi RepID=PLAK_XENLA E=5e-14 s/c=1.31 id=64% cov=100% ESHLNMTRAQRVRAAMYPETVedhsyLFSTQIEGQQ-TNVQKLAEPSQMLKSAIMHLINYQ >UniRef50_A8Q356(34-92:1350) Armadillo/beta-catenin-like repeat family protein n=1 Tax=Brugia malayi RepID=A8Q356_BRUMA E=2e-13 s/c=1.30 id=54% cov=100% DESYAQTRSDRIRAAMFPD-LCPdktSGMGSSSHrSTIVSKLAEPSQLLTTAVVELLSLQ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * D 1 * * 671 1427 * * * * * * * * * * * * * * * * 1 0 * * * * * * 1840 0 0 G 2 2440 * * 2004 * 2524 * * * 2286 * * * * * 2415 * * * * 2 0 * * * * * * 1840 0 0 Q 3 * * * 2286 * * 2415 * * * * * * 1481 * 2004 * * * * 3 0 * * * * * * 1840 0 0 Y 4 * * * * 2440 * * * * 2415 * * * * * * * * * 671 4 0 * * * * * * 1840 0 0 A 5 1241 * * * * * * * * * * 2415 * 2286 * 2440 * * * * 5 0 * * * * * * 1840 0 0 M 6 * * * * * * * * * 2440 820 * * 2004 * * * * * * 6 0 * * * * * * 1840 0 0 T 7 * * * * * * * * * * * * * * * 2286 331 * * * 7 331 2286 * 1585 585 * * 1840 1000 0 R 8 * * * * * * * * * * * * * * 0 * * * * * 8 0 * * * * * * 1840 0 0 A 9 414 * * * * * * * * * * * * * * 2004 * * * * 9 0 * * * * * * 1840 0 0 Q 10 * * 2004 * * * * * 2286 * * * * 874 * * * * * * 10 0 * * * * * * 1840 0 0 R 11 * * * * * * * * * * * * * * 0 * * * * * 11 0 * * * * * * 1840 0 0 V 12 * * * * * * * 2004 * * * * * * * * * 414 * * 12 0 * * * * * * 1840 0 0 R 13 * * * * * * * * * * * * * * 0 * * * * * 13 0 * * * * * * 1840 0 0 A 14 331 * * 2286 * * * * * * * * * * * * * * * * 14 0 * * * * * * 1840 0 0 A 15 0 * * * * * * * * * * * * * * * * * * * 15 0 * * * * * * 1840 0 0 M 16 * * * * * * * * * * 0 * * * * * * * * * 16 0 * * * * * * 1840 0 0 F 17 * 2286 * * 719 * * * * * * * * * * * * * * 2415 17 0 * * * * * * 1840 0 0 P 18 * * * * * * * * * * * * 0 * * * * * * * 18 331 2286 * 2585 263 * * 1840 1000 0 E 19 * * 2004 874 * * * * * * * * * * * 2286 * * * * 19 414 * 2004 * * * * 1840 0 0 T 20 * * * * * * * * * * * * * * * 1925 441 * * * 20 0 * * * * 0 * 1570 0 1000 L 21 * * * * * * * * * 300 * * * * * * * 2415 * * 21 300 2415 * 2322 322 * * 1840 1000 0 I 22 * 2004 * * * * * 2524 * 1349 * * * * * * * 2440 * * 22 0 * * * * * * 1840 0 0 P 23 * * * 2440 2415 * * * * 2286 * * 1241 * * * * * * * 23 414 2004 * 1585 585 * * 1840 1000 0 S 24 2286 * * * * 2440 * * * * * * * * * 712 * * * * 24 0 * * * * * * 1840 0 0 T 25 * * * 2440 * 2004 * * * * * * * * * * 820 * * * 25 294 2440 * 2322 322 * * 1840 1000 0 Q 26 * * * * * * * * * * 2004 * * 414 * * * * * * 26 0 * * * * * * 1840 0 0 F 27 * * * * 2524 2004 * 2415 * * * * * * * 2440 * 2286 * * 27 0 * * * * * * 1840 0 0 D 28 * * 2524 1349 * * * * * * * 2440 * * * 2004 * * * * 28 331 * 2286 * * * * 1840 0 0 A 29 2163 * * * * 2026 * * * * * * 2070 * * 1770 * * * * 29 0 * * * * 0 * 1697 0 1000 A 30 2524 * 2440 * * 2286 * * * * * * * 2415 * 2004 * * * * 30 0 * * * * * * 1840 0 0 H 31 * * * * * * 1241 * * * * * * 794 * * * * * * 31 828 2004 2415 0 * * * 1840 1000 0 P 32 1966 * * * * * * * * * * * 1126 * * 1807 * * * * 32 0 * * * * 0 * 1753 0 1000 T 33 * * * * * * * * * * * * * * * * 0 * * * 33 0 * * * * * * 1840 0 0 N 34 * * * * * * * 2004 * * * 414 * * * * * * * * 34 0 * * * * * * 1840 0 0 V 35 * * * * * * * * * 2286 * * * * * * * 331 * * 35 0 * * * * * * 1840 0 0 Q 36 * * * * * * * * * * * * * 414 * 2004 * * * * 36 0 * * * * * * 1840 0 0 R 37 * * * * * * * * 1195 * * * * * 828 * * * * * 37 0 * * * * * * 1840 0 0 L 38 * * * * * * * * * 0 * * * * * * * * * * 38 0 * * * * * * 1840 0 0 A 39 0 * * * * * * * * * * * * * * * * * * * 39 0 * * * * * * 1840 0 0 E 40 * * * 0 * * * * * * * * * * * * * * * * 40 0 * * * * * * 1840 0 0 P 41 * * * * * * * * * * * * 0 * * * * * * * 41 0 * * * * * * 1840 0 0 S 42 * * * * * * * * * * * * * * * 0 * * * * 42 0 * * * * * * 1840 0 0 Q 43 * * * * * * * * * * * * * 0 * * * * * * 43 0 * * * * * * 1840 0 0 M 44 * * * * * * * * * 647 1468 * * * * * * * * * 44 0 * * * * * * 1840 0 0 L 45 * * * * * * * * * 0 * * * * * * * * * * 45 0 * * * * * * 1840 0 0 K 46 * * * * * * * * 414 * * * * * * * 2004 * * * 46 0 * * * * * * 1840 0 0 H 47 * * * * * * 2524 * * * * * * * * 1349 1206 * * * 47 0 * * * * * * 1840 0 0 A 48 0 * * * * * * * * * * * * * * * * * * * 48 0 * * * * * * 1840 0 0 V 49 * * * * * * * 794 * * * * * * * * * 1241 * * 49 0 * * * * * * 1840 0 0 V 50 * * * * * * * * * * 2415 * * * * * * 300 * * 50 0 * * * * * * 1840 0 0 N 51 * * * 2004 * * 794 * * * * 2524 * * * * * * * * 51 0 * * * * * * 1840 0 0 L 52 * * * * * * * * * 0 * * * * * * * * * * 52 0 * * * * * * 1840 0 0 I 53 * * * * * * * 414 * 2004 * * * * * * * * * * 53 0 * * * * * * 1840 0 0 N 54 * * * * * * * * * * * 414 * * * 2004 * * * * 54 0 * * * * * * 1840 0 0 Y 55 * * * * * * * * * 2004 * * * * * * * * * 414 55 0 * * * * * * 1840 0 0 Q 56 * * * * * * * * * * * * * 0 * * * * * * 56 0 * * 0 * * * 1840 0 0 //