HHsearch 1.5 NAME c4o8wE_ FAM FILE c4o8wE_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4o8wE_.a3m DATE Sat Mar 22 08:12:06 2014 LENG 115 match states, 115 columns in multiple alignment FILT 16 out of 20 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.3 EVD 0.4062 -1.0063 SEQ >ss_dssp CCCCCCHHHHHHHHHHHHTSHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTSHHHHHHHHHHHHSHHHHHHHHHHHHHHHT SHHHHHHHHHHHHHC >sa_dssp EDEEDEEEDDEDDDEEEEEDEDBDCEDEDCDEDEEDCDDDEDEDEEEEDDECEECDEDEECDDEDDEEDEDEEDECDDDDEEEDEEDDDDDEDDDEEDDE CEEDDECDDDEEEDE >ss_pred CCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH CHHHHHHHHHHHHCC >ss_conf 9300398999999999961822489999996286569999999869999999999509268999999971948899999997089999999999999974 878899999998409 >Consensus xxlvxdxxxVKxaixxxltSxexkkfwxxxxxDPxFAxxfAKsxxxexkxlxkxLMKDPxYQkxmxxilkxPexxKxxlxxxKSxeyRxqxxxVixetlx SPlFqxkxxdxlxka >c4o8wE_ QQLVIDQKAVKETLQQMLTSDQGKKFWESALKDPKFAESFAKGLQAEHEKMMRALMKDPDYQALMIDILKDPEMEKAMVDVLKSKEFRQHLQKVITETLN SPLYQAKIQDMLMKA >UniRef50_Q8ETR0(7-180:214) Spore germination protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ETR0_OCEIH E=2e-37 s/c=0.53 id=40% cov=101% NLLVMESDTVKNAVNEALTSEESKKSWEKMFEDPEFVKTYAQSISDEQKNLMKDLMNDSQFQKQMIELLNNPEVTEQMLSVVKSQQFRAHLEETIQQTLQ SPIFQAKIEEILLKA >UniRef50_B1HMU3(3-151:180) Spore germination protein gerD n=2 Tax=Bacillaceae RepID=B1HMU3_LYSSC E=2e-23 s/c=0.53 id=34% cov=101% ELLILEHDEVKKATEETLLSKEAEDFWKKTFEDPKFKETVAKSMQKQQQDIMKDLIKDPTFQKDMEAFFGQPDMQKQLETILKSSNMRKQMEEVVKETIE SPLMQSKWQELIKKS >UniRef50_C6D4K3(15-187:235) Spore germination protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D4K3_PAESJ E=6e-23 s/c=0.58 id=30% cov=101% LLSVQDQEQVRLAVKDVMVSPEYDKVIRTLMTDTRFAGEFAKAVNKQNKDIHKELMKDPTYQEQMIKAFKTPEMDKMILEVLQSTQYKKQVMSLMQESMQ NPLFRLEVLDLMKKA >UniRef50_D2LW45(25-227:228) Putative uncharacterized protein n=2 Tax=Bacillus RepID=D2LW45_BACS4 E=3e-56 s/c=0.84 id=46% cov=101% QNLVMEEDYVKQTIQTTLTSDEGKEYWQRVMQDPEFAKSFAESIQSQNEKMMKSLMKDPEYQGMMMDVLKDPEMEEKYLELMQSKEYRQQVMTVMQDAFE SPYFVAKLNDIFSNV >UniRef50_Q73F58(1-205:205) Spore germination protein GerD n=77 Tax=Bacillaceae RepID=Q73F58_BACC1 E=3e-51 s/c=0.80 id=47% cov=101% QALILDETVVKKTIEDAMVSDKGQQFWEKLFKDPEFSSKFAKSMGKEQTALMKTLLKDPEYQAGVMEIMKNPEVEKMMLQTMKSKEYRQYLQQVLTETAE SPLFQAKMIDIISKG >UniRef50_C0ZIL7(4-183:218) Spore germination protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZIL7_BREBN E=8e-42 s/c=0.83 id=40% cov=100% QNLMLDESTVRTTLIQSMTNPNNTH-IKEAFKDPKFASAMAKSMKNEQKTLMKDLMKDPEYQKELISVMKDPEFEKNLMDLMKSSAYRQQTMQVMKDSLQ SPLFQAELMKIMTKV >UniRef50_C6J6D0(6-238:264) Spore germination protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J6D0_9BACL E=9e-41 s/c=0.75 id=30% cov=101% VKMILpsqTSNEVRMAVKETITSPEYKKEIEKIMTDPQFAGDFAKAINAQSKELHMQLIKDPTYQKSISEILKSPEVMKMFLDLTKTPDYRKQSMTVMQE AMQSPLFKLEVLELLKTV >UniRef50_UPI0001694622(6-205:264) spore germination protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001694622 E=1e-36 s/c=0.74 id=32% cov=101% GSGSGGGamsmmsesqlAQLKIAAKDVLTSTDNSKLLQEIMKDPQFAGEFAKAIKNDNKQLQKDLMKDPEYQKQMLEIMKNSDYEKMVLEVMKSVPYRQQ VMNLIQESMQSPLFKTQLISLMKKA >UniRef50_C8WTT7(6-194:223) Putative uncharacterized protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTT7_ALIAD E=3e-33 s/c=0.71 id=37% cov=101% NQLIASPDEVKQALTDFIQSKQTQTFLTEAAKDPQFAAALAKAAQPELKDTVESLMKDPNFQQDMLVLLQSNEFMKSLQTMMQGPEFRSELQKVILQTLA SPTFQVQFQQTVQDA # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * Q 1 * * * 2364 * 3847 * * 4029 3776 * 2574 * 1678 * 4007 * 4073 * * 1 0 * * * * * * 3291 0 0 Q 2 2988 * * 4211 * * * * 4073 2152 * 2465 * 2167 * 2925 * * * * 2 0 * * * * * * 3291 0 0 L 3 * * * * * 2925 * * * 442 4073 * * * * 3776 * * * * 3 0 * * * * * * 3291 0 0 V 4 * * * * * * * 1795 * * 3904 * * * * 2925 * 962 * * 4 93 4007 * 3459 138 * * 3291 1000 0 I 5 3449 * * * * 3847 * 2544 * 1925 1894 * * 2887 * * * * * * 5 88 4073 * 1585 585 * * 3291 1000 0 D 6 * * 1089 2016 * 3847 * * * * * * * * * 2702 4073 * * * 6 0 * * * * * * 3291 0 0 Q 7 * * * 2464 * 2925 3725 * 4029 * * * 3449 1896 * 2397 * * * * 7 104 3847 * 3322 152 * * 3291 1000 0 K 8 2935 * 1067 3776 * * * * 4455 * * 4073 * * * 3904 2766 * * * 8 0 * * * * * * 3291 0 0 A 9 2702 * * 2142 4211 * * * * * * * * 2289 * * 2804 3271 * 3129 9 0 * * * * * * 3291 0 0 V 10 * * * * * * * 2980 * 3847 4029 * * * * * * 430 * * 10 0 * * * * * * 3291 0 0 K 11 * * * * * * * * 437 * * * * * 1936 * * * * * 11 0 * * * * * * 3291 0 0 E 12 * * * 2378 * 3953 * 3847 2387 3776 3040 3710 * 2790 * * 3904 * * * 12 0 * * * * * * 3291 0 0 T 13 814 * * * * * * 4524 * * * * * * * * 1368 * * * 13 0 * * * * * * 3291 0 0 L 14 3847 * * * * * * 1764 * 1789 * * * * * * 3725 1883 * * 14 0 * * * * * * 3291 0 0 Q 15 * * * 1713 * * * 3904 1921 * * 3710 * 2351 * * 3449 * * * 15 0 * * * * * * 3291 0 0 Q 16 * * 1280 2241 * * * * 3953 * * * * 1948 * * 4237 * * * 16 0 * * * * * * 3291 0 0 M 17 2858 * * * 3449 * * * * * 4455 * * * * 3904 1217 2133 * * 17 0 * * * * * * 3291 0 0 L 18 * * * * * * * 2728 * 626 2313 * * * * * * * * * 18 0 * * * * * * 3291 0 0 T 19 * * * * * * * * * 3725 * * * 3449 * * 653 2346 * * 19 0 * * * * * * 3291 0 0 S 20 * * * * * * * * * * * 3904 * * * 100 * * * * 20 0 * * * * * * 3291 0 0 D 21 * * 1613 2535 * * * * 2109 * * * 2328 * * * 3847 * * * 21 0 * * * * * * 3291 0 0 Q 22 * * 3847 1140 * * * * 2124 * * 3904 * 2469 * * * * * * 22 0 * * * * * * 3291 0 0 G 23 3725 * * * * 1233 * * * * * 2875 * * * 3710 3449 * * 2361 23 0 * * * * * * 3291 0 0 K 24 * * 3776 2834 * * * 4570 1135 * * * * 2708 * 3847 3904 * * * 24 0 * * * * * * 3291 0 0 K 25 4029 * 3725 3088 * * 3904 * 1084 * * * * 4024 * * 2781 * * * 25 100 * 3904 * * * * 3291 0 0 F 26 * * * 2944 791 * * * * 3712 * * * * * 3634 * 3682 * 4124 26 0 * * * * 0 * 3233 0 1000 W 27 * * * * * * * 1936 * 2634 * * * * * * * * 792 * 27 0 * * * * * * 3291 0 0 E 28 * * * 1356 * * * * 2272 * * * * 2502 2897 * 3449 * * * 28 0 * * * * * * 3291 0 0 S 29 * * * 1543 * * * * 1406 * * 3210 * * 4237 4455 3776 * * * 29 0 * * * * * * 3291 0 0 A 30 1512 * * * * * * 1967 * 2895 3710 * * * * * 3725 3224 * * 30 0 * * * * * * 3291 0 0 L 31 3449 * * * 1536 * * * * 2931 1210 * * * * * * * * * 31 0 * * * * * * 3291 0 0 K 32 * * * 2207 * * * * 1210 * * * * 2677 * * 2361 * * * 32 0 * * * * * * 3291 0 0 D 33 * * 0 * * * * * * * * * * * * * * * * * 33 0 * * * * * * 3291 0 0 P 34 * * * * * * * * * * * * 288 * * * 2466 * * * 34 0 * * * * * * 3291 0 0 K 35 * * 3953 2030 * * * * 1578 * * * * 1823 3776 * * * * * 35 0 * * * * * * 3291 0 0 F 36 * * * * 0 * * * * * * * * * * * * * * * 36 0 * * * * * * 3291 0 0 A 37 347 * * * * * * * 3725 * * * * * * 4024 * 3710 * * 37 0 * * * * * * 3291 0 0 E 38 2710 * * 1882 * 1921 * * 2447 * * * * * * 2963 * * * * 38 0 * * * * * * 3291 0 0 S 39 2187 * 3040 2811 * 3953 * * 4024 * * * * * * 2441 2279 * * * 39 0 * * * * * * 3291 0 0 F 40 * * * * 670 * * * * 3449 3904 * * * * * * 2869 * 3710 40 0 * * * * * * 3291 0 0 A 41 0 * * * * * * * * * * * * * * * * * * * 41 0 * * * * * * 3291 0 0 K 42 * * 4029 3224 * * * * 405 * * * * 3710 * * * * * * 42 0 * * * * * * 3291 0 0 G 43 1491 * * * * 3489 * * * * * * * * * 1027 3953 * * * 43 0 * * * * * * 3291 0 0 L 44 3449 * * * * * * 1641 * 2353 1648 * * * * * * 3776 * * 44 0 * * * * * * 3291 0 0 Q 45 * * * * * 4024 * * 2061 * * 2361 * 1225 * 3710 * * * * 45 0 * * * * * * 3291 0 0 A 46 3251 * 3710 * * * * * 1979 * * 2875 3449 * * 2563 2574 * * * 46 0 * * * * * * 3291 0 0 E 47 * * 3847 673 * 4570 * * * * * * * 1937 * * * * * * 47 0 * * * * * * 3291 0 0 H 48 * * * * * * 2702 * * 3449 * 1686 * 1633 * 3040 * * * * 48 0 * * * * * * 3291 0 0 E 49 * * * 1724 * * * * 836 * * * * 3725 * * 4024 * * * 49 0 * * * * * * 3291 0 0 K 50 3026 * 2058 4073 * * * * 1724 * * 3710 * 2925 * * 3904 * * * 50 0 * * * * * * 3291 0 0 M 51 * * * * * * * 2303 * 1129 2815 * * * * * 2904 3953 * * 51 0 * * * * * * 3291 0 0 M 52 * * * * * * 2361 3229 * 3117 1243 * * 3847 * * * 3449 * * 52 0 * * * * * * 3291 0 0 R 53 * * * 3449 * * * * 432 * 3040 * * * 4455 * * * * * 53 0 * * * * * * 3291 0 0 A 54 2931 * 1794 3776 * * * * 3953 * * * * 3040 * 1944 4024 * * * 54 0 * * * * * * 3291 0 0 L 55 * * * * * * * * * 0 * * * * * * * * * * 55 0 * * * * * * 3291 0 0 M 56 * * * * * * * 2342 * 4024 432 * * * * * * * * * 56 0 * * * * * * 3291 0 0 K 57 * * * * * * * * 115 * * 3710 * * * * * * * * 57 0 * * * * * * 3291 0 0 D 58 * * 0 * * * * * * * * * * * * * * * * * 58 0 * * * * * * 3291 0 0 P 59 * * * * * * * * * * * * 115 * * 3710 * * * * 59 0 * * * * * * 3291 0 0 D 60 * * 2544 1357 * * * * * * * 3449 * 3710 * * 1888 * * * 60 0 * * * * * * 3291 0 0 Y 61 * * * * 2037 * * * * * * * * * * * * * * 403 61 0 * * * * * * 3291 0 0 Q 62 * * * * * * * * * * * * * 0 * * * * * * 62 0 * * * * * * 3291 0 0 A 63 2239 * * 3776 * 3394 * * 1075 * * * * 2781 * * * * * * 63 0 * * * * * * 3291 0 0 L 64 4007 * 2581 3904 * 4024 * * * 4455 1651 * * 2192 * 4073 * * * * 64 0 * * * * * * 3291 0 0 M 65 * * * * * * * 3040 * 2928 545 * * * * * * 4024 * * 65 0 * * * * * * 3291 0 0 I 66 * * * 3725 * * * 1526 * 2634 1764 * * 4007 * 4073 * * * * 66 0 * * * * * * 3291 0 0 D 67 3725 * 1467 1906 * * * * 3776 * * * * * * 2928 * 3449 * * 67 0 * * * * * * 3291 0 0 I 68 3776 * * * 3725 * * 1195 * 2574 4007 * * * * * * 2439 * * 68 0 * * * * * * 3291 0 0 L 69 * * * * 2750 * * * * 764 1930 * * * * * * * * * 69 0 * * * * * * 3291 0 0 K 70 * * * * * 3725 * * 532 * * 3710 * 2679 * * * * * * 70 0 * * * * * * 3291 0 0 D 71 * * 1534 * * * * * * * * 1771 * 3725 * 2230 3776 * * * 71 0 * * * * * * 3291 0 0 P 72 * * * * * * * * * * * 3449 253 * * 3847 * * * * 72 0 * * * * * * 3291 0 0 E 73 4029 * 2270 706 * 3953 * * * * * * * 4211 * * * * * * 73 0 * * * * * * 3291 0 0 M 74 * * * * 2659 * * * * * 1148 * * * * * * 1946 * 2935 74 0 * * * * * * 3291 0 0 E 75 * * 2862 1174 * 4211 * * * * 2230 * * 3725 * * 3710 * * * 75 0 * * * * * * 3291 0 0 K 76 * * * 2447 * * * * 292 * * * * * * * * * * * 76 0 * * * * * * 3291 0 0 A 77 2931 * * 4029 * * * * 3088 * 1925 3904 * 2279 * 2702 * * * * 77 0 * * * * * * 3291 0 0 M 78 4211 * * * 3040 * * 3776 * 2096 1894 * * * * * * 2935 * 3088 78 0 * * * * * * 3291 0 0 V 79 * * * 3725 * * * 4524 * 974 3199 * * 2710 * 3953 * 4455 * * 79 0 * * * * * * 3291 0 0 D 80 * * 1958 1682 * * * * * * * * * 2988 * 3710 2130 * * * 80 0 * * * * * * 3291 0 0 V 81 * * * * * * * 3725 * 1474 2710 * * * * * 4024 1514 * * 81 0 * * * * * * 3291 0 0 L 82 3953 * * * * * * * * 1552 1335 * * * * * 3040 3710 * * 82 0 * * * * * * 3291 0 0 K 83 * * * * * * * * 473 * * 4007 * 2201 * * * * * * 83 0 * * * * * * 3291 0 0 S 84 * * * * * 3449 * * * * * * * * * 346 3040 * * * 84 0 * * * * * * 3291 0 0 K 85 * * * * * * * * 1470 * * * 2230 2826 * 2812 3776 3847 * * 85 0 * * * * * * 3291 0 0 E 86 3904 * 3040 952 * * * * * * * 3725 3847 2743 * * * * * * 86 0 * * * * * * 3291 0 0 F 87 * * * * 1459 * * * * * 2869 * * * * * * * * 1002 87 0 * * * * * * 3291 0 0 R 88 * * * * * * * * 3776 * * * * * 109 * * * * * 88 0 * * * * * * 3291 0 0 Q 89 3710 * * 4211 * * * * 1420 * * * * 1557 * 2679 * * * * 89 0 * * * * * * 3291 0 0 H 90 * * * 3449 * * 2268 * * * * * * 961 * * 4029 * * 2988 90 0 * * * * * * 3291 0 0 L 91 * * * * * * * 4211 * 1234 2869 * * * * 3040 3904 2355 * * 91 0 * * * * * * 3291 0 0 Q 92 * * * 2207 * * * * * * 1191 * * 1533 * * * * * * 92 0 * * * * * * 3291 0 0 K 93 * * * 1847 * 4211 * * 2866 * * 3847 * 2553 * 3776 2197 * * * 93 0 * * * * * * 3291 0 0 V 94 * * * * * * * 4211 * 2811 * * * * * * 3710 460 * * 94 0 * * * * * * 3291 0 0 I 95 * * * * * * * 1207 * 4024 1441 * * * * * * 2869 * * 95 0 * * * * * * 3291 0 0 T 96 * * * * * * * 4029 2812 3449 4524 3076 * 1345 * * 2745 * * * 96 0 * * * * * * 3291 0 0 E 97 * * 2465 619 * * * * * * * * * 2574 * * * * * * 97 0 * * * * * * 3291 0 0 T 98 2129 * * * * * * * * * * * * * * 2257 831 * * * 98 0 * * * * * * 3291 0 0 L 99 4024 * * * 3129 * * 3725 * 1046 1921 * * * * * * * * * 99 0 * * * * * * 3291 0 0 N 100 3449 * * 2034 * * * * * * * 2378 * 1296 * 3953 * * * * 100 0 * * * * * * 3291 0 0 S 101 * * 4029 * * * * * * * * 2887 * * * 316 * * * * 101 0 * * * * * * 3291 0 0 P 102 * * * * * * * * * * * * 0 * * * * * * * 102 0 * * * * * * 3291 0 0 L 103 4029 * * * * * * 3060 * 689 * * * * * * 3449 * * 3224 103 0 * * * * * * 3291 0 0 Y 104 * * * * 376 * * * * * 3725 * * * * * * * * 2702 104 0 * * * * * * 3291 0 0 Q 105 4211 * * * * * * * 1973 * * * * 991 2887 * * 4237 * * 105 0 * * * * * * 3291 0 0 A 106 1152 * * * * * * * 3953 2917 4007 * * * * 2948 3847 3449 * * 106 0 * * * * * * 3291 0 0 K 107 * * * 1936 * * * * 963 * * * * 2148 * * * * * * 107 0 * * * * * * 3291 0 0 I 108 * * * * 2679 * * 2268 * 2401 2500 * * * * * * 2361 3725 * 108 0 * * * * * * 3291 0 0 Q 109 * * * 2306 * * * 2932 * 2361 3904 4237 * 1745 * * 4211 * * * 109 0 * * * * * * 3291 0 0 D 110 * * 1004 1869 * * * * 3904 * * * * 3449 * 3847 * * * * 110 0 * * * * * * 3291 0 0 M 111 * * * 3953 * * * 1738 * 1345 3489 * * * * 4029 3449 * * * 111 0 * * * * * * 3291 0 0 L 112 * * * * 4237 * * 2866 * 1136 1925 * * * * * * 3449 * * 112 0 * * * * * * 3291 0 0 M 113 * * * * * * * 4570 1306 2860 4455 * * 3449 * 2569 3181 * * * 113 0 * * * * * * 3291 0 0 K 114 * * 3449 * * * * * 446 * * 4237 * * * * 3040 * * * 114 0 * * * * * * 3291 0 0 A 115 787 * * * * 4024 * * * * * * * * * 3087 * 2050 * * 115 0 * * 0 * * * 3291 0 0 //