HHsearch 1.5 NAME c4n6eB_ FAM FILE c4n6eB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4n6eB_.a3m DATE Sat May 17 08:17:17 2014 LENG 89 match states, 89 columns in multiple alignment FILT 113 out of 436 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.0 EVD 0.4519 1.5592 SEQ >ss_dssp CEEEECCGGGTTTTTTCSEEEECCSBHHHHHHHHHHHSTTHHHHHEETTEECTTEEEEETTEEGGGGTGGGCBCCTTCEEEEEECCCCC >sa_dssp DACBDBCEEBCECAEEEEDBDAECDCACDABDCBCEECEDACEEBCEEDECCEEBCACBDEECBDEDECBEAEBEEEBDACBDCEEEEE >ss_pred CEEEEEEHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEECCEECCCCCCCCCCCCCCCEEEEECCCCCC >ss_conf 97999804365640981389717774899999999852114442036433442089999671223434546434799899997887899 >Consensus avxVxxxaxlrxxxgxxxeixxxgxTvxxllxxlxxxxpxlxxxlxxxxxlxxxvxvxvNgxxvxxxxxxxxxlxxgDeVxixPpvaGG >c4n6eB_ AVTVSIPTILRTHTGGEKSVEAKGATVLEIIDDVESRHAGIKARLVKEEKLHRFINVYVNDEDVRFSGGLEAEVKDGDTLTILPAVAGG >UniRef50_A9F8Y4(18-96:96) Putative uncharacterized protein n=7 Tax=Rhodobacterales RepID=A9F8Y4_9RHOB E=5e-10 s/c=0.83 id=19% cov=90% --TVHLWSGLRRFAEGQEVVEVEASTTGTMIAALKASYPALTPALD------AGVSVAVDGRII--AASLDEPLAPENEIYLMQRLRGG >UniRef50_B9XRQ7(3-81:81) ThiamineS protein n=1 Tax=bacterium Ellin514 RepID=B9XRQ7_9BACT E=2e-09 s/c=0.81 id=23% cov=79% ---------FKDLTGCTDTIEtlTDGSTIDTLLKQLIERFPKL-------GGMQNSTLIAVGVEY----QGRSYVLKAGDQVSLFPPVQGG >UniRef50_C1DI36(3-90:90) Molybdopterin biosythesis protein, MoaD n=1 Tax=Azotobacter vinelandii DJ RepID=C1DI36_AZOVD E=5e-12 s/c=0.82 id=23% cov=99% --TLFVPAPFRKSVEDLSRLEVGAGSVSALLREVDTRYPGFnAQLHGPDGSVKKYIRIFVNGKDIKALDGMETALDTRDEVFIVSAMAGG >UniRef50_B8GHP3(3-93:93) ThiamineS protein n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GHP3_METPE E=7e-12 s/c=0.79 id=21% cov=101% AITIRFFAQFRELLGERIQLVVPeGTTITEAVQIVCRERNEAATALFgEDGTFREYVILMQNGIRVNRTEAATTVVADEDEVAVFPPVAGG >UniRef50_B5FVI0(3-99:99) Ubiquitin-related modifier 1 n=1 Tax=Yarrowia lipolytica RepID=URM1_YARLI E=4e-06 s/c=0.54 id=20% cov=100% -ITVEFSGGLETAFDGNKkhVLDVPeGSSVNWLLHHMVETLMPDHKREegknifLQDESVRPGVLVLINDSDWELEGEDQYILQPRDVIIFASTLHGG >UniRef50_A8M0H5(2-88:88) ThiamineS protein n=2 Tax=Actinomycetales RepID=A8M0H5_SALAI E=9e-06 s/c=0.59 id=21% cov=98% -VRIILPSVWTQ--DGRTDFDTDEGPLHDVIRRFAADHPDYRHRLLTpDGEPLSYINICVDDDLIPRHRRQHTRVPADSTVTIIAPMAGG >UniRef50_Q8SW42(16-96:96) Ubiquitin-related modifier 1 n=1 Tax=Encephalitozoon cuniculi RepID=URM1_ENCCU E=1e-07 s/c=0.71 id=21% cov=82% -----------------EEVEGSSiATVGDALRYLFGKYAETRDSFFDhHGELVHGTICIINKMDWEILEKERSPVKHGDHIVLISTIHGG >UniRef50_Q2T8J4(8-96:96) ThiS family domain protein, putative n=3 Tax=Burkholderia thailandensis RepID=Q2T8J4_BURTA E=6e-07 s/c=0.62 id=21% cov=100% AMNIVLSGVLQKYAQYQREHSLAAETVQEAIQLLVGRFPAMGNVLLDSaGHPRKVHRMFLNGHQISPEQ-VGQCVKQEDRLEILTAIAGG # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 832 * * * * * * * * * * * * * * 1190 * * * * 1 0 * * * * * * 4625 0 0 V 2 * * * * * * * 1473 * 5706 3069 * * * * * * 996 * * 2 0 * * * * * * 6417 0 0 T 3 * * * 4546 * * 5529 * 2212 6087 * 5756 * 4026 2352 4110 1429 * * * 3 0 * * * * * * 6559 0 0 V 4 * * * * 5085 * * 2115 * 3621 * * * * * * * 603 * * 4 0 * * * * * * 6559 0 0 S 5 * * * 3160 4791 * 4726 4025 2461 2941 * * * 5015 1832 5531 4189 5756 * 4867 5 0 * * * * * * 6559 0 0 I 6 * 3733 * * 2286 * * 2960 * 1709 6539 * * * * 5104 * 3408 * 2725 6 0 * * * * * * 6564 0 0 P 7 4114 * * * 1778 * 6499 * 6391 4042 5454 * 1987 * * 3863 4564 5353 4729 3075 7 0 * * * * * * 6564 0 0 T 8 971 * 5294 * * 2372 * * 6095 5284 * 5411 5312 * 5238 2995 5041 * * * 8 0 * * * * * * 6566 0 0 I 9 3329 * * * 5247 3391 4865 5748 5131 4904 * 4571 2944 4116 4221 3518 2664 3208 6225 6170 9 0 * * * * * * 6577 0 0 L 10 3538 * * * 3082 * * 4287 * 622 6651 * * * * 6678 * 4372 6237 6214 10 31 * 5556 * * * * 6755 0 0 R 11 3626 * * 4784 * * 5317 * 4597 6602 * 6398 6287 4150 673 5133 4555 5784 * 6817 11 0 * * * * 918 1086 6799 0 1646 T 12 4708 * 2224 1863 * 6349 5648 * 3614 4951 * 5511 4294 4376 4210 3958 3864 5758 * * 12 73 6386 4747 0 * * 0 6796 1000 1000 H 13 2313 * * 5112 3126 * 3655 3928 4641 2391 5446 * * 5439 3955 6494 6247 5530 * 3022 13 0 * * * * 1000 1000 6753 0 2584 T 14 1752 6782 * * 3574 6513 * 5560 * 3288 * * 6361 6679 * 4913 1749 3195 * 6202 14 119 4760 4567 1462 651 983 1017 6776 2119 1675 G 15 6426 * 3613 4028 * 613 5151 * 5482 6375 * 4687 5073 4802 6370 * * 6315 * * 15 288 3052 4048 117 3682 0 * 6829 4050 3051 G 16 5125 3959 4130 4653 * 1291 6645 6995 2630 6701 * 4902 4805 5721 4849 5843 6268 4974 * 5191 16 86 4744 5593 0 * 0 * 6845 1883 3086 E 17 3941 5770 3782 1813 * 6439 4896 * 4067 6631 * 5040 * 3669 3297 3274 3676 4266 * * 17 27 5728 * 538 1684 0 * 6915 1457 1684 K 18 4351 * 4549 2386 5060 4704 6823 3879 2917 5710 * 6170 5667 4711 3739 3068 3462 4263 * 6423 18 146 3487 7091 321 2328 * * 7018 4001 0 S 19 7315 * 3881 1223 6805 * 6553 5135 6553 5865 * 5995 * 3903 3252 4728 3032 3756 * * 19 66 5399 5554 0 * 0 * 7028 2287 1000 V 20 5616 6441 5626 * 4542 * 6170 2020 * 2068 6496 * * * 6116 5626 5768 1717 6256 5348 20 72 4640 6857 747 1307 0 * 7037 2408 1598 E 21 4555 * 2327 1589 5502 * 5431 5972 * 5423 * 4604 6265 4083 6923 3417 3867 4111 * * 21 48 4947 * 599 1557 0 * 7048 2183 1000 A 22 3561 5212 * 5689 4398 4466 * 3291 6521 2064 6983 6333 4191 * * 7002 4309 1871 5847 * 22 204 3046 6542 1162 855 * * 7053 4454 0 K 23 3272 * 2691 2663 * 3951 7000 * 5064 * * 7726 1891 5123 5684 2880 6664 * * 6251 23 177 3114 * 430 1955 0 * 7102 4105 1000 G 24 2216 6229 5164 3714 * 1045 * 7732 5416 * * 4633 5234 * 6702 4402 6526 5639 * * 24 142 3565 6768 0 * * * 7129 3730 0 A 25 3404 6796 3821 3234 * 3042 * 6338 4014 4723 5119 4984 6737 5087 4392 2046 3805 5290 * * 25 78 4453 7118 821 1205 0 * 7120 2675 1000 T 26 6780 * 4989 6573 * 6291 * * 5151 6417 * 3442 5082 * 5722 3075 669 6933 * * 26 31 5537 * 622 1514 0 * 7143 1539 1000 V 27 5572 * * * 6643 6362 * 2655 * 2118 5436 * 5037 5973 6419 * 6782 1128 * 5643 27 8 * 7488 * * * * 7142 0 0 L 28 3411 * 4758 4713 * 2045 5227 7002 3994 4450 * 4936 5572 3565 2465 3413 6545 6812 * 6303 28 29 6578 6702 1000 1000 * 0 7145 1000 1000 E 29 2634 5751 1724 1894 * 5174 6298 * 4836 * * 6158 * 3946 * 5258 4472 6639 6273 * 29 0 * * * * * 0 7135 0 1614 I 30 2909 6766 * * 4395 * * 4486 * 975 5601 * 6290 * * * 6808 2221 * * 30 0 * * * * 0 * 7135 0 1614 I 31 6307 * * 5530 4088 * * 2196 6077 1270 4481 * * * 4404 6645 5829 2948 * 6610 31 0 * * * * * * 7142 0 0 D 32 2746 * 2623 2643 * 5443 4852 * 3489 4639 * 4455 6935 3273 3363 4960 4429 6837 * * 32 0 * * * * * * 7142 0 0 D 33 2323 * 4540 3109 5095 5031 4398 4231 4030 3764 5047 4512 * 4385 3638 4520 5035 5773 5695 4963 33 0 * * * * * * 7142 0 0 V 34 4088 * * * 4372 6517 6872 3599 * 717 5446 * * 6354 * * * 2894 6294 * 34 10 * 7157 * * * * 7142 0 0 E 35 2770 4924 4368 2902 3939 4855 * 3681 4092 5113 6670 5971 6350 4923 4310 3486 4507 3078 * * 35 14 * 6692 * * * 0 7138 0 1000 S 36 2876 * 3284 2282 * 3491 5747 5703 4119 4756 * 6232 * 3835 3870 3528 3596 6256 * * 36 13 6788 * 0 * * 0 7119 1000 1592 R 37 3849 * 4159 3136 * 7172 6784 5177 3392 3892 4917 4733 6000 3276 2097 6210 3469 5184 * * 37 46 6652 5565 1000 1000 * 0 7119 1000 1592 H 38 4770 5201 5230 6600 3358 3916 3050 6203 5865 3999 6022 6126 * 6741 5499 4274 * * 4593 1446 38 49 5289 7056 3577 126 * 0 7246 2054 2536 A 39 4487 * 4736 5046 * 2753 6236 6190 5176 * 6213 6453 823 5979 5728 5180 5618 6389 * * 39 23 6781 7250 0 * * 0 7245 1000 2806 G 40 2883 * 2822 2565 6549 2327 * * 4690 5287 * 7066 4183 3670 4503 5162 5784 4841 * 6198 40 66 4989 6222 0 * * 0 7249 2047 3050 I 41 3501 * 5450 5776 2906 6737 5560 3343 5437 1362 4622 * 5832 * * 5566 4601 4612 * 4858 41 37 6997 5855 0 * 1345 722 7294 1000 3442 K 42 2955 * 5256 3232 4323 4207 5100 6627 2514 4321 * * * 4990 2368 4479 4599 5115 5509 6992 42 57 * 4702 * * * 0 7300 0 3044 A 43 4105 * 3363 2264 5297 4486 5531 * 2697 5363 * 4542 3779 4292 3457 3543 5467 * * * 43 152 * 3325 * * 2311 325 7073 0 3852 R 44 3105 * 5077 3263 6181 * 4209 6604 3053 2954 6504 6002 5347 5036 2640 5359 6636 4096 7069 3647 44 83 * 4159 * * 2183 359 6963 0 4912 L 45 5566 * 4955 5973 4220 6193 5447 2804 6752 1402 5334 6531 6440 6644 6720 6322 6710 2179 * * 45 23 5973 * 2585 263 * 0 6944 1000 4914 V 46 5147 4418 5381 5074 2109 4681 * 4301 5545 1903 4821 6078 6531 * 4741 5404 4677 4480 6898 4423 46 277 2756 5232 658 1449 3971 95 6944 4834 4914 K 47 4752 * 1449 3054 6071 4744 * * 4217 * * 3869 4170 4575 5526 4464 2866 * * * 47 228 3511 4101 172 3152 2789 226 6941 3902 4912 E 48 5330 * 1937 2218 * 2233 4502 6084 5275 5335 6582 5326 5051 6036 * 3860 6668 * * 5835 48 304 2623 5176 313 2357 3532 130 6890 4584 5178 E 49 4101 * 3273 2286 5338 1363 6372 6820 5842 * * 5038 6252 4353 5220 4345 6291 * * * 49 91 4282 6655 307 2383 2603 260 6863 2809 5362 K 50 2920 * 4564 3074 * 3304 5236 * 3017 6234 * 4754 6102 3918 3206 4382 3263 5178 5378 6348 50 58 5156 6497 368 2152 2951 200 6893 2075 5051 L 51 6342 * * * 4635 5154 * 2310 * 1435 5858 6379 3972 * 5184 * 5341 2503 * 5258 51 37 6114 6479 1585 585 1906 448 6916 1000 4883 H 52 4298 * 5324 5009 5320 4252 4539 3940 2992 3520 * 5357 6087 6852 1494 4829 6307 5278 6790 6777 52 47 7338 5266 0 * 3026 189 6939 1000 4600 R 53 4070 * 4154 2980 * 4307 5184 * 3329 5385 * 4671 2252 5837 3066 2727 5722 * * * 53 17 6415 * 0 * 1764 503 6926 1000 4690 F 54 6661 6693 3771 4545 2755 2447 3587 * 5859 6787 7154 4437 * 6386 3855 2995 5532 4665 6198 3490 54 18 6340 * 1000 1000 3227 163 7003 1000 4084 I 55 5233 3633 * * 4587 * 6287 1976 * 3603 5719 * 7156 * 6177 4728 4592 1651 * 3955 55 15 * 6553 * * 547 1664 7012 0 3950 N 56 4342 * * * 6625 6037 * 2647 4638 2933 3817 2840 * 5252 2348 3983 4881 4347 * 6040 56 18 * 6369 * * 0 * 7038 0 2410 V 57 5912 5546 * * 3229 * * 1855 * 3258 5583 * * 6466 * * 6513 1276 * 5773 57 0 * * * * * 0 7125 0 1000 Y 58 2098 5333 * * 2540 * * 5443 * 1948 4037 6290 * * 5406 4230 4369 6633 * 3672 58 10 7201 * 2000 415 0 * 7125 1000 1000 V 59 5323 6675 * * 6562 * 5844 2444 5644 2599 5723 * * 6550 6671 * * 952 * 6355 59 0 * * * * * * 7141 0 0 N 60 5750 5971 2777 6870 * 3574 6623 * * * * 567 * * 5619 6519 * 6570 * * 60 25 * 5885 * * * * 7141 0 0 D 61 6781 * 2564 5018 * 1093 4592 * 4664 6458 6638 4859 6844 3265 5485 5610 6290 7119 * 6658 61 32 7128 6078 2807 222 * 0 7124 1000 1618 E 62 4704 6223 4688 2211 * * 5762 5688 3356 6230 5541 4071 * 3344 1932 4480 4555 5978 * * 62 11 * 7054 * * 1867 462 7067 0 2494 D 63 7228 * 2200 5536 3789 * 4156 4564 5697 5143 4592 3037 4705 4924 3736 4197 7083 4675 * 2999 63 63 * 4541 * * 846 1172 7064 0 2415 V 64 2723 5411 * * * * * 1818 * 4304 * 6566 * * * 5300 4356 1781 3805 4520 64 194 6200 3153 2000 415 * 0 7053 1000 3105 R 65 4428 * 3621 3048 * 4743 6370 5573 3011 5670 * 4584 3859 4533 2395 3049 4023 6505 * * 65 148 * 3360 * * 2375 309 7221 0 4861 F 66 3816 * 3543 4651 3304 4659 2939 5016 * 2994 * 4521 4250 * 3238 4310 5964 4308 5925 4636 66 182 5572 3358 1585 585 3362 148 7104 1000 5277 S 67 4710 * 3044 3554 5490 5241 4973 5320 5109 1572 5455 5813 5053 4834 4245 3794 6226 4626 * * 67 13 * 6780 * * 1868 462 7041 0 5670 G 68 3842 6258 2411 2696 * 2906 * * 4651 7079 * 4637 5486 2690 5625 3496 5491 4971 6181 * 68 84 6015 4608 1585 585 1077 927 7143 1000 5195 G 69 3471 * 3226 3781 6311 1383 4806 6353 6232 5477 6478 4737 4206 6138 4112 4258 6442 * 6429 * 69 39 7302 5621 2000 415 1081 923 6964 1000 4757 L 70 4456 * 4888 2987 4459 6485 * 4429 4461 1488 4984 * 3271 5754 4361 5205 * 4651 5631 * 70 18 6307 * 1585 585 699 1381 7066 1000 4079 E 71 3482 * 2069 3035 6583 4443 4536 * 4579 * * 3903 5181 4398 4602 2761 3676 * * * 71 48 * 4925 * * * 0 7109 0 2592 A 72 2512 * 5082 4259 5583 * 7067 5340 7022 6521 6582 * * 4122 3714 4917 1445 4131 * 3838 72 0 * * * * 1451 657 7079 0 3645 E 73 3038 5494 5731 2878 * 7449 5018 4580 4199 5019 6113 7200 2098 4522 4224 5707 4562 3126 6688 * 73 11 * 7077 * * 1360 712 7104 0 2915 V 74 * * 6425 * 5151 * * 2893 * 916 6383 * * * * * * 1818 * * 74 0 * * * * 1866 462 7050 0 2614 K 75 2606 * 4839 3809 * 3902 4140 * 2650 6244 * 4039 4422 3558 3367 3427 4529 * * 6999 75 0 * * * * * 0 7076 0 2181 D 76 3553 * 1371 2427 * 5036 4943 * 5252 6827 * 5110 2676 4799 * 6811 6174 * * * 76 0 * * * * 1623 566 7076 0 2181 G 77 4866 * 3088 4060 * 717 * * 7130 * * 4281 * 5082 4369 4533 * * * * 77 0 * * * * 1098 908 7132 0 1634 D 78 2867 6508 603 4578 * * * * 6783 * * * * 5211 5419 3657 * 6269 * * 78 16 6502 * 1000 1000 0 * 7138 1000 1000 T 79 5894 6562 4888 1249 * * 6406 6553 5926 4465 * 6902 6727 5041 3511 4971 3594 2537 * 6495 79 23 5971 * 0 * * * 7141 1000 0 L 80 6848 * * * 5971 * * 1797 * 2378 5976 * * * * * * 1061 * * 80 0 * * * * * * 7141 0 0 T 81 1688 * 3951 4974 5838 5150 4619 3787 5696 3939 5969 * * 7002 5772 3290 3706 3512 * 4596 81 0 * * * * * * 7138 0 0 I 82 6501 7006 * * 2183 * * 1422 * 2086 * * * * * * * 2714 * * 82 19 * 6291 * * * * 7138 0 0 L 83 6263 * * * 2100 * * 2104 * 1996 3883 * * * * * 6462 2733 6907 4942 83 0 * * * * 0 * 7121 0 1000 P 84 4549 * * * * 4726 * * * 6454 5470 * 479 4701 * 3365 4946 * * * 84 13 * 6807 * * * * 7097 0 0 A 85 2108 * * * * * 6610 5913 * 5337 * * 927 * 6316 4142 4384 4463 6738 5722 85 0 * * * * 0 * 7095 0 1000 V 86 4164 * * * 3853 6628 * 2065 * 3180 3918 6875 * * * * 6534 1217 * * 86 0 * * * * * * 7097 0 0 A 87 1326 6458 * * * 3501 3563 * 6571 * * * * 5246 6936 1692 4263 * * 6607 87 0 * * * * * * 7092 0 0 G 88 * * * * * 37 * * * * * * * * * 5312 * * * * 88 0 * * * * * * 7092 0 0 G 89 * * * * * 0 * * * * * * * * * * * * * * 89 0 * * 0 * * * 7093 0 0 //