HHsearch 1.5 NAME c4mgeB_ FAM FILE c4mgeB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4mgeB_.a3m DATE Sat Sep 14 08:22:55 2013 LENG 107 match states, 107 columns in multiple alignment FILT 108 out of 180 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.1 EVD 0.4016 -0.8435 SEQ >ss_dssp CCEEEEECCSHHHHHHHHHHHHHHHHTTCCSCEEEEEGGGSTTTTTTCSEEEECGGGGGGHHHHHHHHHHHTCEEEECCHHHHHTTCHHHHHHHHHHHHH HHHSSCC >sa_dssp CCAAAACDEDEDBDDABEDADEABEEDECEEDBBCBDCECBEECAEDBDAAAABCEBEECBEEBDECACEDDBBBCBADEECCEECDBDBAADCACECDE DCEEDEE >ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHCCCCEEEEECHHHHHCCCHHHHHHHHHHHHH CCCCCCC >ss_conf 9899991797547999999999999669857999856989997326488999941899999999997000598199888799960699999999999960 7744469 >Consensus mkIlLxCxxGxSTsxlxxkmxxxaxxxxxxxxIxAxxxxxxxxxxxxxDvILlaPQixxxxxxixxxxxxxxipVxxIxxxxYgxmdgxxilxxaxxlxx xxxxxxx >c4mgeB_ MNILLCCSAGMSTSLLVTKMEAAAKARGLEGKIWAVSGDAVKTNIDQADVLLLGPQVRYMLSSMKTLADERNVGIDVINPMHYGMMNGEAVLDHALTLKK GENLYFQ >UniRef50_A4AFC0(4-99:110) Putative uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AFC0_9ACTN E=0.0001 s/c=0.50 id=22% cov=91% --VLVVCGAGASSTFLAHALRKQAIARGMPHTFIPASITALGMPLTAVDVVLVSAHVADFFEQAKAAAETIGAAALQLPMVSFTPAGADIALDLLDSL-- ------- >UniRef50_C3RQX8(1-90:93) Predicted protein n=2 Tax=Bacteria RepID=C3RQX8_9MOLU E=7e-13 s/c=0.83 id=22% cov=80% ----MCCSSGLTTAMFAQMLQDFSNNNHLPYHFSATSIYDDDTLSKEYDLVLMAPQVQHY---TKSMAAKYHKRFLIMNPVDFAQYNCNNIV-------- ------- >UniRef50_Q31TC5(3-86:101) Ascorbate-specific phosphotransferase enzyme IIB component n=97 Tax=Enterobacteriaceae RepID=ULAB_SHIBS E=0.0004 s/c=0.54 id=15% cov=55% VRILAVCGNGQGSSMIMKmKVDQFLTQSNIDHTVNSCAVGEYKSELSGADIIIASTHIA----------------------------------------- -------- >UniRef50_C3RQI6(2-102:136) Putative uncharacterized protein n=2 Tax=Bacteria RepID=C3RQI6_9MOLU E=2e-17 s/c=0.89 id=22% cov=93% LKILICCGGGFSSSYVTERMKKEVVEKGLQEEVYleFYPFSLVKEKEADFDIIMCCPHLKIYVERLLQETT-ISVPIYLLPPKMYGFMQLEEIVADAKDI IE------- >UniRef50_B9YAK3(1-100:104) Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAK3_9FIRM E=1e-16 s/c=0.88 id=21% cov=93% MKALIICQFAITSKNMITKVIQYAREHGNDISVECASVSEIAELpFENYQAVLLAPQVRNYLKNVTEKCAPLHIPVNSIDVVAYGLQDPEKVLNQIKKML -------- >UniRef50_Q14L78(2-94:94) Hypothetical pts system IIb component protein n=1 Tax=Spiroplasma citri RepID=Q14L78_SPICI E=2e-10 s/c=0.72 id=22% cov=88% IKIALICSAGISANRILDKINDVIVKNNYDMQFFVITPEQLE---NNYNIILLAPQVEYLSAKVAAIA--INSKVAVLPSELYINNDSKGIIDFVNTL-- ------- >UniRef50_C0WUT3(3-96:105) Putative uncharacterized protein n=3 Tax=Lactobacillus RepID=C0WUT3_LACBU E=7e-12 s/c=0.76 id=23% cov=87% -NVLLICENGISSNFLLKSAKSFMEVYDVQFNLISTDYTKADTYLDsNIDLVLIAPQASYHDKEIKMI--DGRAKVKTIPDDVYGWANGEKLVKFI---- -------- >UniRef50_C3RPB2(8-96:96) Predicted protein n=2 Tax=Bacteria RepID=C3RPB2_9MOLU E=2e-09 s/c=0.71 id=23% cov=76% ------------SDFFVEKLIEESEKGSVKCEIQAYSIAEALENRIDADVVLLSPLICFEQIKIERLV---RCPVDIIGIGAYALFDVKAILLKA----- ------- >UniRef50_B5E1T1(456-558:559) PTS system, IIBC component n=27 Tax=Streptococcus pneumoniae RepID=B5E1T1_STRP4 E=9e-12 s/c=0.69 id=20% cov=95% LKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQIVATRGMEYIHLtkNPSKALQFVLEH YQA------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * 1924 * 2395 974 * * * * * * 4746 * * 1 0 * * * * * * 5243 0 0 N 2 * * * * * * 5035 * 950 5962 * 1942 * 6235 2851 6339 6469 * * * 2 0 * * * * * * 6156 0 0 I 3 5190 * * * * 6428 * 808 * 5927 * * * * * * * 1421 * * 3 0 * * * * * * 6220 0 0 L 4 6205 6708 * * 6667 5612 * 3741 7170 759 3742 * * * * * 5351 3088 * 4128 4 15 6619 * 0 * * * 6272 1000 0 L 5 5631 6286 * * * * * 2485 * 695 4761 * * * * * * 2901 * * 5 0 * * * * * * 6302 0 0 C 6 3267 2383 * * 3632 * * 3001 * 2443 5824 * * * * 5250 5762 1985 * * 6 0 * * * * * * 6302 0 0 C 7 * 69 * * * * 5569 * * * * * * * * 5293 * * * * 7 0 * * * * * * 6302 0 0 S 8 1819 * 4653 4673 6605 2380 * * * 5163 5783 3523 * 5418 * 2298 3902 6868 * * 8 31 5569 * 0 * * * 6302 1000 0 A 9 1895 6766 * 6482 4028 1922 7092 * * 4940 * 3405 * 5000 * 2899 3746 * 6461 * 9 29 5661 * 2000 415 * * 6302 1000 0 G 10 4810 * * 5375 * 119 * * * * * * * * * 5663 * * * * 10 0 * * * * * * 6331 0 0 M 11 2530 * * * 3574 4601 * 3094 * 2906 1591 4626 * * * 5006 5220 5590 * * 11 0 * * * * * * 6331 0 0 S 12 4871 * * * * 4180 * * * * 5589 * * * * 621 2060 * * * 12 0 * * * * * * 6331 0 0 T 13 4198 * * * * * * * * * * 5964 * * * 1388 869 * * * 13 0 * * * * * * 6377 0 0 S 14 3820 * 4607 6710 * 2671 4814 * 5959 * * 4568 * 4987 * 936 3768 * * * 14 36 5338 * 0 * * * 6377 1931 0 L 15 4736 * * * 3026 * * 2319 * 1776 2563 5981 * 5704 6271 6019 6995 4584 * 3942 15 0 * * * * * * 6381 0 0 L 16 * * * * 2915 * * 3529 * 1019 2312 * * * * * * 3539 * * 16 0 * * * * * * 6383 0 0 V 17 1521 5673 * * * * * 4810 5389 3623 3697 * * * 6890 6044 4781 1497 * * 17 11 6999 * 0 * * * 6383 1000 0 T 18 4707 * 4097 3185 * 4994 6086 7155 1889 5641 5607 2958 * 2955 6044 3711 4253 6387 * 5952 18 34 5421 * 0 * * * 6383 1549 0 K 19 3669 6540 5641 5026 * 6726 * * 957 6448 6395 3434 * 5716 3528 3687 5317 * * 6479 19 7 7594 * 0 * * * 6383 1000 0 M 20 4048 * * * * 6556 * 2194 * 2466 1200 * * * * * 6030 3665 * * 20 0 * * * * * * 6464 0 0 E 21 6513 * 5925 3322 * 5384 6899 4804 1709 6047 5288 3547 * 2824 2986 4770 4582 6021 * 6480 21 0 * * * * * * 6464 0 0 A 22 3798 * 3756 2036 * * 6279 * 1829 5627 6036 5649 * 3050 4352 4245 5134 6706 * * 22 11 6996 * 0 * * * 6464 1000 0 A 23 1733 6996 6818 3032 4319 5707 5922 5990 5217 3434 * 5958 * 5044 6886 4905 4576 3257 * 3257 23 0 * * * * * * 6464 0 0 A 24 1095 5607 6516 * 5752 * * 2853 * 3071 4911 * * * 7112 3403 5631 3851 * * 24 27 5778 * 2000 415 * * 6464 1545 0 K 25 3709 * 3675 2213 * * * 3576 2223 6628 6565 4655 6464 3810 4721 4323 4204 4710 * 6934 25 18 6329 * 3459 138 * * 6464 1000 0 A 26 3706 * 3975 1879 6717 4497 6996 6439 2019 3557 * 5650 6789 6541 5958 3995 4612 6286 * 6516 26 51 5275 6789 2000 415 * * 6464 1751 0 R 27 6069 * 3033 3797 6921 5553 4429 6454 2669 3750 * 3183 * 3170 2634 6838 5667 5895 * 4489 27 23 * 5983 * * * 0 6463 0 1000 G 28 5765 * 4070 2722 * 1308 4429 * 4272 * * 2487 * 4508 * 4437 * * * * 28 38 7247 5710 2000 415 * 0 6464 1000 2024 L 29 5586 6634 * 4703 5471 * * 2637 3339 1880 3693 6080 * 5343 * 6404 * 2746 6476 3506 29 82 4898 5516 716 1353 674 1422 6450 2208 2809 E 30 4910 * 1708 2824 * 5772 6660 * 3526 * * 3551 2554 4178 5690 4633 4882 * * * 30 0 * * * * 1082 922 6442 0 2455 G 31 3735 3597 6774 5336 4608 6180 6078 2964 * 2683 4699 * * * * 6952 6946 2392 4219 2681 31 0 * * * * 985 1015 6443 0 1691 K 32 6143 * 3394 2305 6027 * 4767 4324 3634 6270 5177 3700 6716 3537 4974 3795 3188 4582 * 4745 32 61 4593 * 3275 157 0 * 6453 3020 1000 I 33 4399 5282 * * 3322 * * 1101 * 5161 6726 * * * * * * 1628 * * 33 14 6655 * 1000 1000 * * 6464 1000 0 W 34 4649 * 3111 2025 4814 6802 4418 3957 3642 6329 * 3914 * 4769 * 3489 4766 6222 5109 3657 34 17 6388 * 1000 1000 * * 6464 1000 0 A 35 659 5273 6516 6960 5463 6628 5364 * 6998 * * * 4813 7592 * 2855 4323 6295 * 6047 35 0 * * * * * * 6464 0 0 V 36 2852 3612 * * 4115 4348 6978 3166 4321 4466 6789 * * * 5068 4236 3570 2615 5542 3359 36 0 * * * * * * 6464 0 0 S 37 2879 * 5345 * * 2483 6588 * * 6886 * 4935 2308 * * 1601 3911 6516 * * 37 0 * * * * * * 6464 0 0 G 38 3223 * * 3406 3372 6081 * 2963 5916 3693 5372 6862 5312 5419 5621 4737 3688 2844 6781 3322 38 0 * * * * * * 6464 0 0 D 39 2948 6047 3562 3621 * 2897 4499 4950 7340 5502 4732 4335 * 4963 * 2277 3587 6280 * 5129 39 12 6900 * 1000 1000 * * 6464 1000 0 A 40 3672 * 3545 1897 7392 5897 6817 5945 3433 6388 * 4429 * 2604 3624 3950 5394 4860 * * 40 0 * * * * * * 6464 0 0 V 41 2745 7117 5446 6655 3447 4577 5123 2321 * 1979 6041 * * * * 6189 * 3035 * 4514 41 28 * 5710 * * * * 6464 0 0 K 42 3212 5964 3387 2149 5367 4789 6693 6544 2716 4976 5702 4358 * 6179 4235 4158 5429 4440 * 5056 42 67 4961 6268 0 * 1030 970 6460 1674 1576 T 43 4967 * 1902 2208 * 5404 6763 * 3126 5237 5328 4806 * 4623 5750 3079 4018 6622 * * 43 76 5935 4849 0 * 956 1046 6440 1576 1610 N 44 5771 * 4492 3688 * 6402 5371 3424 2829 3239 5297 4386 5957 5065 5983 4790 4115 3070 * 2879 44 51 4839 * 1897 451 1488 636 6381 2124 2163 I 45 2789 5783 * 5060 5414 3085 * 2194 5966 2172 4566 * * * 6582 6360 * 3572 6796 4277 45 163 3230 * 937 1066 0 * 6403 3922 1606 D 46 3615 * 3098 2327 7023 3515 6542 4875 3135 5051 * 3692 4010 4125 4988 4926 5272 5000 * * 46 61 4595 * 773 1270 * * 6464 2542 0 Q 47 4792 * 1891 2642 * 3842 6177 * 2968 6706 6407 2493 6020 4367 6090 7598 * 5707 * 5584 47 41 5152 * 1000 1000 * * 6464 2227 0 A 48 2350 5157 * * 4136 * * 2851 * 5580 5145 6407 4892 5441 * 6386 4786 3953 5178 1633 48 21 6091 * 1000 1000 * * 6464 1624 0 D 49 * * 257 5628 * * * * 6899 * * 4915 * 4401 * 4820 * 5734 * * 49 0 * * * * * * 6464 0 0 V 50 2839 4112 * * 5944 * * 2420 * 2406 5194 * * * * 6329 * 1571 * 4866 50 0 * * * * * * 6464 0 0 L 51 5284 5979 * * 6485 * * 1258 * 2673 * * * * * * * 1555 * 4965 51 0 * * * * * * 6464 0 0 L 52 * * * * 5121 * * 3961 * 370 3486 * * * * * * 6677 6415 5478 52 0 * * * * * * 6413 0 0 L 53 5749 5342 * * * * * 2883 * 796 5225 * * * * * 5716 2325 * * 53 0 * * * * * * 6413 0 0 G 54 1372 5331 * 5158 * 1497 * * * * * * * * * 2783 4032 * * * 54 16 * 6523 * * * * 6406 0 0 P 55 4743 * * * * * * * * * * * 73 * * * 6353 * * * 55 0 * * * * * 0 6389 0 1000 Q 56 * * * * * * 2855 * * 5176 * * * 347 5482 6517 6077 * * * 56 33 * 5482 * * * 0 6343 0 1000 V 57 6176 * * 6406 5469 * * 1672 * 2708 4685 5890 * * * 5413 4257 1539 * 6719 57 0 * * * * * 0 6288 0 1682 R 58 2163 5123 6804 4080 * 4836 * * 2903 * 5425 * * 4426 1691 3024 * 6841 * * 58 20 * 6167 * * * 0 6288 0 1682 Y 59 7065 * 5335 * 2155 5539 3192 5933 * * 4031 5310 * * 5805 3745 6739 * * 1294 59 0 * * * * 1364 710 6273 0 2138 M 60 3631 * 5537 3210 4926 * 4416 5364 3044 2598 3189 4724 * 4281 3980 5178 6763 5891 * 3586 60 18 * 6343 * * 1052 950 6330 0 1591 L 61 6315 6627 5482 3382 3940 * * 4350 2260 2378 5272 * * 3532 5268 6153 6397 3520 * 3438 61 0 * * * * * 0 6261 0 1718 S 62 3402 * 2756 2498 5858 4510 * 6529 2869 * * 2789 3570 6736 5228 3985 6459 5624 * 6409 62 0 * * * * * 0 6261 0 1718 S 63 5063 * 3246 2218 5432 5675 6650 * 2658 5069 6212 3729 * 2995 3653 5121 4170 6405 * 5729 63 0 * * * * 869 1144 6261 0 1718 M 64 3745 6732 * * 4011 * * 1779 * 2116 4330 * * * * 6769 4836 2165 * 6053 64 0 * * * * * 0 6353 0 1000 K 65 4029 * * 1915 * * * 6532 1712 4777 5414 5904 * 3176 3539 5992 5398 4480 * * 65 13 * 6844 * * 0 * 6353 0 1000 T 66 2759 * 4454 2472 * 5175 * * 2344 6871 6229 4578 4928 3447 4122 3894 4725 4295 * * 66 44 * 5061 * * * 0 6347 0 1000 L 67 3410 6411 4670 3287 5044 * * 2267 3010 2894 4560 6005 * 5456 4281 5688 4633 5244 * 4740 67 21 * 6140 * * 1859 465 6367 0 2329 A 68 2177 3498 6316 * 2970 5379 6475 4283 * 2678 6395 * * * * 7014 3272 2694 * 5071 68 100 6541 4154 1585 585 1026 974 6357 1000 2428 D 69 2339 * 2827 3025 * 3450 * * 2800 5392 * 3870 3370 5500 * 4214 4696 * * * 69 180 * 3089 * * 1783 495 6211 0 3585 E 70 5268 * 2472 2722 * 3508 * * 2503 5106 * 3524 3112 5222 5013 4646 5817 * * 5025 70 89 * 4058 * * 2013 411 6130 0 4662 R 71 4017 5730 6559 * 6487 5076 4979 3539 2176 3181 6663 3904 6468 5180 4274 6559 4263 5287 * 2615 71 217 6516 2956 0 * 303 2399 6192 1000 4662 N 72 6673 * 4746 4434 * 1848 3883 * 4625 5502 * 1961 6736 4553 4204 4188 3841 * * 6534 72 91 5226 4857 1000 1000 1072 931 6224 1721 4586 V 73 4498 4328 * * * 5733 * 1635 2833 4714 6497 * * 6330 * 6004 3075 2126 * * 73 16 * 6511 * * 565 1627 6504 0 3738 G 74 4031 * * 6930 7174 5684 6499 4467 2978 4183 * * 763 4423 5602 * 6707 * * * 74 0 * * * * 0 * 6390 0 2459 I 75 5852 6652 * * 4670 * * 2331 * 3856 7039 * * * * * 4978 768 * 4682 75 0 * * * * * * 6368 0 0 D 76 2404 * 4034 2686 6719 4168 6438 4637 5532 3524 3842 6114 * * 5708 5440 3886 2848 * 4782 76 0 * * * * * * 6368 0 0 V 77 3367 5171 7085 * 5881 * * 3224 5656 2683 6381 4325 5888 4373 * 3798 3447 1949 * 5740 77 0 * * * * * * 6394 0 0 I 78 * * * * * * * 443 * 3098 4184 * 5591 * * * 4818 4782 * * 78 0 * * * * * * 6394 0 0 N 79 4521 * 1508 4235 * 4084 * * 5995 * * 3618 1972 5090 5559 4874 4159 * * * 79 0 * * * * * * 6394 0 0 P 80 3996 6866 4878 7316 * 4099 * 4046 4773 * 2337 4223 1902 4901 * 3192 4158 6046 * * 80 38 * 5253 * * * * 6385 0 0 M 81 4233 * 3433 2959 6300 5051 * 7305 3166 4291 3853 * 6178 2981 3578 4912 5174 2906 * 5254 81 0 * * * * * 0 6340 0 1591 H 82 2946 * 1808 4179 * 6820 4897 3758 6340 3712 4514 5946 6269 6086 * 4079 4704 3020 * 5956 82 0 * * * * * 0 6340 0 1591 Y 83 * * * * 2068 * * * * * * * 5860 * * * * * * 426 83 32 6204 6862 1000 1000 * 0 6340 1000 1591 G 84 2037 * * 5089 * 974 * 3936 6519 6361 * * * * 5846 4711 3759 * * * 84 0 * * * * 1538 609 6294 0 1956 M 85 4383 * * 6089 5008 * 5536 5805 3602 3545 2562 3979 3950 4371 3706 3442 2950 * 4737 5840 85 0 * * * * * 0 6361 0 1564 M 86 3891 5490 * * 4946 5107 * 4421 6369 2074 1385 4508 * 5135 * * 6678 5605 * 3897 86 53 4789 * 1000 1000 * 0 6318 1477 1564 N 87 6246 * 1105 * * 4135 * * 4774 * * 1418 * 6001 4691 * * * * * 87 0 * * * * * 0 6318 0 1564 G 88 2683 4313 * * 6540 784 * 6081 * 5970 * * 4758 * 6779 6067 5862 3780 * 5585 88 0 * * * * 1075 929 6278 0 1564 E 89 3052 * 3689 1794 * 4835 6278 * 2675 5844 * 3887 4147 3547 4899 5084 * 5708 * * 89 0 * * * * 0 * 6297 0 1000 A 90 2096 * * 3506 * 4543 * 5016 1431 * 6122 3827 6451 5620 4742 5356 5633 * 5904 5777 90 0 * * * * * * 6294 0 0 V 91 2634 * * * * * * 1593 * 2676 5375 * * * * * 4609 1806 * * 91 0 * * * * * * 6294 0 0 L 92 6128 * * * 4605 6862 * 3626 * 734 4748 * * * * * 6701 3025 * 3574 92 21 6101 * 1000 1000 * * 6272 1000 0 D 93 3760 * 2022 3421 * 5881 * 5373 1817 6433 * 2877 * 3963 6938 5940 6352 6253 * * 93 19 * 6244 * * * * 6154 0 0 H 94 4601 * 3372 3809 2548 * 4971 6742 3421 3154 6534 6794 * 1782 * 4886 7253 * * 5509 94 0 * * * * * 0 6136 0 1000 A 95 902 6459 * * * 6311 * 1836 * 4356 5805 * * * * 6484 * 3590 * * 95 17 6394 * 0 * * 0 6171 1000 1000 L 96 * * 4497 6361 4657 * 5487 2364 2393 1698 5022 5233 * 4453 * * * 3757 * 6401 96 18 6328 * 0 * * 0 5945 1000 1000 T 97 2999 * 3774 1622 * * * 5297 3023 6581 5948 6862 * * 4054 3012 3517 6925 * 6220 97 0 * * * * 0 * 5895 0 1000 L 98 5688 * * 5112 4600 * 4887 3101 3970 1146 2817 * * 5334 6409 6633 * 5188 6119 6131 98 0 * * * * * * 5869 0 0 K 99 5111 6350 * * * * 5595 1467 4133 2226 3604 * * * 4834 * * 4991 * 2673 99 0 * * * * * * 5675 0 0 K 100 * * 2914 2776 * * * * 1299 5381 * 4758 * 2920 * 3687 5207 5869 * * 100 0 * * * * * * 5465 0 0 G 101 2862 * * 3276 * 2857 * * 3784 * * 1335 * 4199 * 4027 4780 * * * 101 0 * * * * * * 4964 0 0 E 102 3469 * * 1945 * * 4274 * 2133 * * * * 3008 3063 * 4835 * * 3455 102 0 * * * * * * 4743 0 0 N 103 3007 * 2866 4194 * * * * * * * 677 * * 4101 * * * * * 103 0 * * * * * * 4249 0 0 L 104 * * * * * * * 2917 * 668 3054 * * * * 3085 * * * * 104 0 * * * * * * 3877 0 0 Y 105 * * * * * * * * 718 * * * * * * 2415 * * * 2291 105 0 * * * * * * 2631 0 0 F 106 * * * * 1578 * * * * * * * * * * * 588 * * * 106 0 * * * * * * 1943 0 0 Q 107 * * * * * * * * * * * * * 0 * * * * * * 107 0 * * 0 * * * 1605 0 0 //