HHsearch 1.5 NAME c4ku0D_ FAM FILE c4ku0D_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4ku0D_.a3m DATE Sat May 24 08:23:14 2014 LENG 96 match states, 96 columns in multiple alignment FILT 112 out of 164 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.3 EVD 0.4501 0.7216 SEQ >ss_dssp CBBCBTTCBBCCBTTBCCCBBCCCCCSCEETTEEBCBTTCBBCCEECSSTTCCEECCBBCCCCSSCEETTEEBCBTTCBBTTSCBBCCCCSSCBCC >sa_dssp DBBACCDADBDCCECCDEBCACCEBEEDEBEEDBAAACDADBDEBDBEDEEEDDCDCDBDBDAEECDBDEDCAABDDADADCEADADCCCEEDECE >ss_pred CCCCCCCEECCCCCCCCCCEEECCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEEECCEEEEEECCCCCCCCEEEECCCCEEEC >ss_conf 962111005078988787516347651789899835426840244557788887673787046728998677533178121375895057715879 >Consensus xxxxxxxcxxtghgxxppxxvxtGSxxVxinGxPaArxGDxxxxxxxxxxxxxxxxxxIxxGSxtVxInGxPaARxGDxtxCGaxIxxGsxxVfIx >c4ku0D_ SGLSYDKCVTAGHEAWPPTVVNATQSKVFTGGIAVLVAGDPITEHTEIKKPYETHGGVTQPRTSKVYVTGKKAVQMADPISCGDTVAQASSKVFIK >UniRef50_C5ID01(224-304:1616) RhsK n=50 Tax=cellular organisms RepID=C5ID01_ECOLX E=1e-05 s/c=0.63 id=20% cov=83% ---------------FPAGPVLMEFATM-VGGRGEIKKDVDFPEAGEdtALCDKENKPPRIAQGSSNVFINNQPAARKGDKLECSAAIVEGSPDVFI- >UniRef50_Q1LDW3(8-87:88) PAAR n=3 Tax=Proteobacteria RepID=Q1LDW3_RALME E=0.0004 s/c=0.57 id=19% cov=75% -------------------VILTGSDTMIVMGRKAARVGDLVS------CPLPGHGiNPIIEGSDMLTDNGKAIALHGHRTACGCTLIALSTDATIR >UniRef50_Q4K3M9(82-236:1486) Rhs family protein n=5 Tax=Pseudomonas RepID=Q4K3M9_PSEF5 E=4e-11 s/c=0.45 id=29% cov=97% -GLS-NLCEGIANALFPPSIqatIASGSKKVLTNNKPAARAagiapptqisGDGaeegeatdtpsatpeegpgfldmakeffsqmwrptvaspapgsqtk eLDLVTCTKHPPMPV-QYLAEGSEKVSIDGQPAVRSGDRSTCDAKVVSAgpiSPNVTI- >UniRef50_Q76YN3(2-95:97) Putative uncharacterized protein 5.4 n=1 Tax=Aeromonas phage Aeh1 RepID=Q76YN3_9CAUD E=7e-13 s/c=0.80 id=29% cov=98% AGIVLNMAPTIGPGPWKPSKVVGTSSTVFAEGKQiVVRQDDQVIKHERPDGPDWKQGKVIASTS-KVFVEGKPIAQIGDVCTDGEILVKSATSVF-- >UniRef50_A0NW33(1-79:347) Putative uncharacterized protein n=2 Tax=Labrenzia aggregata IAM 12614 RepID=A0NW33_9RHOB E=9e-12 s/c=0.90 id=22% cov=80% ----------------PAPIVWKGAYTVLTGKLPQARVGDMCVCVGPPP---PAGGDPIITGAWNVLVEGSPAARMTDLTAKAGTIVTGLPTVLI- >UniRef50_C7BVC5(11-104:127) Helicase n=1 Tax=Synechococcus phage S-RSM4 RepID=C7BVC5_9CAUD E=5e-12 s/c=0.77 id=23% cov=91% ----------SSHGHQPPTPLpapAGFSSNVFVNGQPVHHVGNTMVIHPIPGtfpPIPHLPPDVIIEGYATVLCNGTPLAKFLSKTQHGSMVMQGSRNVF VR >UniRef50_B0VUK8(10-75:177) Putative uncharacterized protein n=2 Tax=Acinetobacter baumannii RepID=B0VUK8_ACIBS E=9e-07 s/c=0.83 id=25% cov=70% ---------TTDHGG----IVSTGDSTYLIDGKAAHVEG---MTHFCPKCKVMV---TALSSSPLVVINGRAIIVAGDKASCGAT----------- >UniRef50_Q5VIZ8(66-137:150) Putative uncharacterized protein n=1 Tax=Aeromonas hydrophila RepID=Q5VIZ8_AERHY E=2e-05 s/c=0.70 id=22% cov=67% -----------------PSPVISVGSERSLGGKLASRQDEPLAPHD--KPNNPPHPRSISGGVGSVLVNGKPITATGTAVGC-------------- >UniRef50_Q3K9J9(13-88:181) Putative uncharacterized protein n=3 Tax=Pseudomonas RepID=Q3K9J9_PSEPF E=3e-11 s/c=0.92 id=29% cov=80% ------SCPIPGHG---PKAIASGSPDVFFDGLAAARKDDTCTC----------GSALASAVSSTVFINGKNAALVGTVGSHGDVVIGGSGTVII- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 1015 * * * * * * * * * * * * * * 985 * * * * 1 0 * * * * * * 1627 0 0 G 2 * * * * * 0 * * * * * * * * * * * * * * 2 0 * * * * * * 2099 0 0 L 3 * * * * * * * 1570 * 593 * * * * * * * * * * 3 0 * * * * * * 2099 0 0 S 4 * * * * * * * * * * * * * * * 593 * 1570 * * 4 581 * 1593 * * * * 2099 0 0 Y 5 * * * * * * * * * 1015 * * * * * * * * * 985 5 0 * * * * 0 * 1627 0 1000 D 6 * * 544 * * * * * * * * 1671 * * * * * * * * 6 0 * * * * * * 3039 0 0 K 7 2962 * * * * * * * 2780 2009 2759 * * * * 2234 3091 * * * 7 0 * * * * * * 3186 0 0 C 8 3369 259 * * * * * 3885 * * * * * * * * * * * * 8 216 * 2848 * * * * 3765 0 0 V 9 * * * 4032 * * * 1609 * * * * 1497 * * 3807 * 2433 * * 9 0 * * * * * 0 4157 0 1420 T 10 * 4009 3746 4149 * 2744 * 4093 * 4008 * * * 5092 * 4442 1208 5119 * * 10 0 * * * * 0 * 4477 0 1420 A 11 2710 * * * * * 5447 3803 5798 4778 * * 3659 * * 3272 1085 4502 * * 11 0 * * * * * * 4873 0 0 G 12 3673 * 2675 * * 608 * * * * * * * * * 4086 4318 * * * 12 0 * * * * * * 4969 0 0 H 13 5890 4684 4731 5651 * 4293 693 * 5381 * * 3694 4823 * * 5135 4270 * * * 13 0 * * * * * * 4969 0 0 E 14 3385 * 4996 4226 * 674 * * 4684 * 4269 5381 6080 5135 * 4848 * * * * 14 67 * 4452 * * * * 4969 0 0 A 15 4702 3980 * 5355 * 1459 4804 5154 * 4280 * 5522 4292 * * 3090 2400 6058 * * 15 451 5742 2002 0 * * 0 4932 1000 1515 W 16 4497 4866 * 5753 1789 5551 * * * 4099 5387 * * 3711 * 3859 4489 3776 2737 3363 16 115 5103 4387 0 * * 0 4734 1000 3257 P 17 4309 * * * * * 4776 3762 3972 * * * 448 * * * 4549 * * * 17 0 * * * * 3973 95 4702 0 3321 P 18 3504 * * * * 3366 * 5476 * * * * 603 * * 3157 5515 * * * 18 28 5692 * 1000 1000 1644 556 5002 1000 3363 T 19 * * * 4593 * 2855 5481 6100 4166 5781 * 4524 3680 * 2892 2744 1793 6020 * * 19 0 * * * * 958 1043 5096 0 2760 V 20 4256 * * * 6037 * 5163 3268 4281 * * * 1270 * * 3901 4619 2140 * * 20 73 4339 * 1585 585 0 * 5574 1679 2149 V 21 4298 6290 * * * * 5765 1868 5884 3869 * 6346 5437 6214 * 5626 5138 1117 * * 21 31 5567 * 1585 585 * * 5669 1000 0 N 22 2876 * * 6756 * * * 1867 * 3838 5541 3935 6376 * * 3811 2507 2772 5806 * 22 24 5912 * 0 * * * 5693 1000 0 A 23 3397 * * 3504 * 2691 * 6280 5830 6686 5627 6075 5572 4854 * 2406 1546 * * * 23 68 4434 * 2000 415 * * 5729 1700 0 T 24 3326 * * 5715 5737 500 * * 6169 * * * * 6509 * 3993 4348 5759 * * 24 13 6811 * 2585 263 * * 5732 1000 0 Q 25 2773 * 5128 5639 5725 5779 * 4981 * * * 6274 * 4112 * 587 * * * * 25 51 5215 7036 1479 641 * * 5748 1788 0 S 26 3270 6305 4386 4868 5644 2721 * * 6569 * 6209 6634 2114 5134 5173 2003 4923 6511 * 6037 26 0 * * * * * 0 5750 0 1000 K 27 7069 * 2979 4526 5701 * 6097 * 5050 5646 * 1682 * 5648 4980 4018 1674 * * * 27 12 6866 * 0 * * 0 5754 1000 1000 V 28 * * * * 5697 * 5340 * 6118 4598 3974 * * * 5802 4987 3871 535 * 5119 28 27 * 5732 * * * 0 5757 0 1000 F 29 * * 5192 * 1784 * * 5285 3618 2173 4635 5697 * 5796 4195 4371 3694 5494 * 3762 29 0 * * * * 769 1276 5708 0 1410 T 30 5794 * 5756 * 3204 * * 1370 * 5286 6272 * * * * * 3309 1732 * 5178 30 48 * 4919 * * * 0 5757 0 1000 G 31 5188 * 2675 3149 * 2444 7263 * * * 6617 1188 * 4515 5632 * * * * * 31 15 6562 * 1585 585 993 1008 5731 1000 2125 G 32 * * 6419 * 5230 362 * * 4785 6406 * 3839 * * * 3933 * * * * 32 0 * * * * 1022 978 5736 0 1399 I 33 * * * 5903 4914 * * 3362 1902 2804 3506 * * 3677 2338 * * 3677 * * 33 0 * * * * * 0 5733 0 1000 A 34 3033 * * 5618 6662 4035 * 8317 5292 5782 * 5485 584 5769 * 5194 * * * 7786 34 27 5769 * 0 * * 0 5733 1000 1000 V 35 957 * * 5829 * 6755 * 3275 * 6870 * * * 5137 * * 5719 1743 * * 35 29 * 5632 * * * 0 5733 0 1000 L 36 535 6793 * * * * 4301 4569 * 3457 5466 * * * * 4477 * 4815 6191 * 36 15 * 6605 * * 1617 569 5723 0 1785 V 37 5492 5487 6613 * * 7747 4527 * 5020 4070 6673 * * * 670 6210 4495 3282 * 6972 37 0 * * * * 1729 518 5731 0 1724 A 38 2031 * 5637 4672 * * * 5752 3282 3301 4241 * * 3632 5487 * 6144 1722 * * 38 61 6846 4924 3322 152 * 0 5728 1000 1495 G 39 5019 * 3536 * * 483 5127 6137 6580 * * * * * * 5656 3652 * * 6069 39 88 * 4074 * * * 0 5734 0 2298 D 40 5383 * 538 4934 * 5312 7116 6514 4470 5419 * 4766 * * * 5152 5378 4213 * * 40 50 * 4871 * * 1914 445 5673 0 3359 P 41 3920 * 3177 5487 * 3858 6720 6886 3241 3401 3554 * 2911 3426 4101 3842 3847 7596 * * 41 139 4888 4109 4810 52 3295 155 5682 1656 3404 I 42 3533 3882 * * 4087 6095 3839 3769 * 2669 4999 * * 6576 * 5187 4576 1697 5529 5022 42 121 5212 4232 559 1638 2527 275 5646 1689 3802 T 43 2498 * 3765 6977 * 5127 4998 4170 5928 4185 4646 6098 5516 6569 * 2398 3144 2601 * * 43 91 * 4025 * * 2185 358 5631 0 3860 E 44 4139 1272 5583 3464 * * 5946 4842 4859 4180 * * 3474 4882 * 4194 3882 5035 * * 44 335 6265 2364 5700 28 3036 188 5607 1000 3720 H 45 5322 3115 * 4884 * 4538 1537 * * 3941 * 6032 3812 * * 3719 3479 3048 * * 45 85 * 4125 * * 2501 280 5513 0 4247 T 46 3242 2883 2585 5215 4872 2957 * 4095 * 4405 5080 * 4591 4998 * 3590 3703 4869 * * 46 197 * 2973 * * 2709 239 5547 0 4190 E 47 * 2004 3555 3529 * 5452 3476 3789 2908 4461 * 4236 4148 * 5118 6126 4535 5669 * * 47 81 5272 5118 1000 1000 3221 164 5453 1000 4414 I 48 2544 5731 5249 * * 3679 5799 4991 * 6225 * * 1726 5659 6030 3144 4080 3536 * 4421 48 62 * 4566 * * 2794 225 5519 0 4335 K 49 5947 6632 3596 * 5175 3447 5100 3728 2086 3865 * 5123 3348 7100 5159 3565 4733 3671 * * 49 109 4637 4934 4134 85 1814 483 5570 1591 4438 K 50 * 1659 4639 6432 * 4164 2857 * 5055 * 5779 * 1749 4747 * 4189 * * * * 50 138 3886 5411 1480 641 3279 157 5617 2199 4091 P 51 3106 5605 4172 * * 4000 6244 4674 4080 * * 3204 1237 6441 4176 7042 6738 5853 * * 51 124 * 3600 * * 1845 471 5615 0 4112 Y 52 5708 6357 5455 5248 6459 4893 2954 4258 2601 3112 6287 3955 3302 5701 3893 5811 * 3276 * 5247 52 21 * 6137 * * 1857 466 5702 0 3979 E 53 5349 5786 4637 4378 5978 3376 2313 6366 * * 5229 4229 1785 * 6671 3654 6747 * 3739 * 53 134 * 3494 * * 1053 949 5703 0 3733 T 54 4584 4806 6164 * * 3037 3005 5683 3811 3955 * 4237 2433 4899 * 3655 3421 3998 * * 54 82 * 4170 * * 1947 433 5685 0 3796 H 55 3677 * * 5722 5211 1786 2180 5215 4814 * * * 3265 4750 * 4449 4039 4189 * * 55 30 6761 6439 0 * 1773 500 5686 1000 3720 G 56 3630 * 5674 5619 7052 1991 * 3610 * 6108 * 6638 1808 6689 * 3190 6539 3350 * * 56 110 4869 4674 0 * 1137 875 5703 1737 3402 G 57 3786 5618 3236 5493 4495 2911 * * 3610 * 6421 3059 4594 3018 3822 4107 3837 5359 * * 57 34 5428 * 489 1798 466 1857 5672 1605 3329 V 58 3060 * * 6660 7164 6113 5946 3578 4480 3382 4429 * 3341 4411 4157 3782 3316 2772 * 4629 58 0 * * * * 0 * 5728 0 1732 T 59 3670 * * * 6137 * * 714 * 3485 6425 * * * * 6655 5580 2591 * * 59 0 * * * * * * 5746 0 0 Q 60 1472 * * 7063 * 4941 * 2641 * 4796 6790 * 5026 4813 * 4068 4468 2165 * * 60 0 * * * * * * 5801 0 0 P 61 4252 * 4886 2003 6128 4802 * * 3985 7425 * * 4062 2510 6164 2837 2914 6676 * 6223 61 19 * 6254 * * * * 5801 0 0 R 62 5242 * * * 6265 309 * * * 6546 * * * * 5607 4774 4816 4321 * * 62 14 6661 * 1585 585 0 * 5792 1000 1000 T 63 4275 5211 3578 4442 6957 * 5466 * * * * * 6128 6481 5908 606 5609 5334 * 5912 63 27 * 5758 * * * * 5808 0 0 S 64 2933 * 4726 3667 5790 3276 * * 4023 6652 6275 4641 2872 6502 4279 2237 3579 * 6413 * 64 0 * * * * 0 * 5771 0 1000 K 65 4827 6153 4035 * * 6670 4965 6198 3537 6307 6723 3332 * 6128 5496 2762 1363 6158 5908 5428 65 0 * * * * * * 5808 0 0 V 66 4399 6693 * * 4132 * * 3805 * 5015 4445 * * * * * 4713 559 6721 6481 66 0 * * * * * * 5808 0 0 Y 67 * * * * 1718 * 6339 4243 4683 2039 4763 6147 * 6351 5489 4485 3232 6307 * 3332 67 0 * * * * * * 5808 0 0 V 68 4992 5912 5663 * 4898 * 5954 771 * 5701 * * * * * * 5235 1995 * * 68 0 * * * * * * 5808 0 0 T 69 5829 * 3218 2802 6351 3193 * * 6510 * * 933 * 4559 * 6345 5609 * * * 69 0 * * * * * * 5808 0 0 G 70 * * 4143 * * 406 6973 * 7103 * * 3572 * 5456 6288 4399 7252 * * * 70 0 * * * * * * 5808 0 0 K 71 4706 6410 * 5767 6596 * 6618 4996 1568 2738 6132 6339 * 2839 3386 4304 5025 5127 * 5608 71 0 * * * * * * 5808 0 0 K 72 3932 * 6510 6682 * 5528 * 5217 4857 6128 6575 4740 511 4373 6165 * * 7727 * * 72 0 * * * * * * 5808 0 0 A 73 774 * * * * * * 2541 * 4165 4820 5821 * * * * 6818 2994 * * 73 0 * * * * * * 5808 0 0 V 74 356 * * * * 5280 6207 4928 * 6109 7589 * * * * 6613 5223 3476 * * 74 0 * * * * * * 5808 0 0 Q 75 6057 5006 * * 5386 * 6957 5150 5912 2910 * * * 4682 631 * 5895 4901 * 6753 75 0 * * * * * * 5808 0 0 M 76 3979 6410 4380 3594 5606 6732 4157 2800 4037 3070 3407 6345 * 5608 7035 5387 4293 2516 * * 76 0 * * * * * * 5808 0 0 A 77 5176 * 4246 6362 * 453 * * 6653 5238 * 4706 * 5485 * 4759 4542 * * * 77 0 * * * * * * 5808 0 0 D 78 5610 5274 538 * 6345 5329 3441 * * * 5111 * * * * 3637 5563 * * 7638 78 0 * * * * * * 5808 0 0 P 79 3655 6603 * 4412 7527 6069 5980 4853 1927 3328 4687 * 3906 3774 3250 4415 4641 4075 * * 79 20 6154 * 0 * * * 5785 1000 0 I 80 4727 3856 * * * 4888 * 3542 * 3073 4519 * * * * 4912 1183 2863 * * 80 15 6623 * 1585 585 * * 5785 1000 0 S 81 1914 * 4604 3528 * 3952 5591 6764 * 6103 7253 5347 * 5772 * 2288 2349 4401 * * 81 0 * * * * * * 5740 0 0 C 82 * 300 5559 * * 7100 3061 * 6303 7103 * * 6570 * * * 6836 * * * 82 0 * * * * * * 5740 0 0 G 83 5674 * 3862 4846 * 326 6438 * 6574 * * * * * * 4334 * 7035 * * 83 15 * 6632 * * * * 5755 0 0 D 84 1247 3222 4384 5531 * 1742 * * * * * 5545 * * * 3615 * * * * 84 20 * 6190 * * * 0 5626 0 1000 T 85 3167 * * 5532 * * 5293 3790 3821 6173 4848 5939 4638 6073 3982 4467 1662 2698 * * 85 41 5163 * 1750 509 660 1446 5629 1532 1489 V 86 4799 * * * * * * 1090 * 2233 6016 * * * * * * 1910 * * 86 0 * * * * 0 * 5554 0 1000 A 87 2616 * 7405 5581 * * 5146 2442 3771 6989 4530 4747 6480 5559 * 3613 4322 1878 * * 87 14 * 6707 * * * * 5534 0 0 Q 88 3103 * 3803 3138 * 2931 * 5888 4674 5811 6968 * * 3376 * 2582 2635 4036 * * 88 18 6337 * 0 * 0 * 5531 1000 1000 A 89 3516 5822 4643 * * 475 * * * 5942 * * * * * 3275 6004 * * * 89 65 4510 * 897 1111 * * 5525 1832 0 S 90 2833 4085 5213 4360 * 5116 * * * 5344 5730 6468 * 4116 6311 914 5677 5584 * * 90 12 6860 * 0 * * * 5428 1000 0 S 91 5929 * 4921 5182 5668 2367 6484 * 5940 * * 5386 1394 4823 5553 2780 3991 6319 * * 91 0 * * * * * * 5391 0 0 K 92 5755 * 2215 * * 5128 * * 4460 5166 6358 1741 * 6136 * 3549 1982 * * * 92 0 * * * * * * 5312 0 0 V 93 5460 * * * 5231 * * 6156 * 5276 * * * * * * 4162 226 * * 93 0 * * * * * * 5283 0 0 F 94 5070 * * * 947 6058 * 4078 * 2929 5606 4688 * * 5383 * 4529 4407 5116 4528 94 0 * * * * * * 4992 0 0 I 95 * * * * * * * 251 * 3641 * * * * * * * 3648 * * 95 0 * * * * * * 4757 0 0 K 96 * * * * * * * * 1025 * * * * * 975 * * * * * 96 0 * * 0 * * * 2525 0 0 //