HHsearch 1.5 NAME c4jw0A_ FAM FILE c4jw0A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4jw0A_.a3m DATE Sat Sep 7 08:22:25 2013 LENG 95 match states, 95 columns in multiple alignment FILT 82 out of 86 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.7 EVD 0.4051 -1.4193 SEQ >ss_dssp CEEEEEEEEECCSSCCGGGTTCCEEEEEEECTTCCEEEEEEEEEESSCCCTTCEEEEEEGGGGGGSTTCTTSCCCEEEEEECCEEEETTEEEEEC >sa_dssp EDCACAEBEDECEEDEEDBEEBDBADACAACDDBEDDEEECDABBEEEBDEECBADABDDDDADEDEDBDECEBEABADCDBEECEDEEEEDCEE >ss_pred CEEEEEECCEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHCCCCCCEEEEEEEEEEEEEECCCEEEEC >ss_conf 96699955289998738878824999985077777666159999613588998999986988756417999863469999887789568659739 >Consensus MxlakViGxvvaTxKxxxLxGxkLliVqplxxxxxxxgxxxVAvDxvGAGxGdxVlvxxGsxArxxxxxxxxPvDaxIvGIIDxvxxxxxxxxxk >c4jw0A_ MQIGRVRGTVVSSQKEPSMVGVKFLLLQLIDEAGQPLPQYEVAADGVGAGLDEWVLFSRGSAARQVAGSEKRPVDAVVIGIIDTVSVDNRPLYSK >UniRef50_Q7UVK4(1-85:95) Similar to ethanolamine utilization protein EutN n=1 Tax=Rhodopirellula baltica RepID=Q7UVK4_RHOBA E=6e-13 s/c=0.89 id=26% cov=89% MQPARVIGHTRATVKHESLQGRRLVLVQPTGVGEKPDGAPLLVLDELGCRVGDRVMLTSETGpIREMTGFETCPARWSVQGLIDE----------- >UniRef50_B5JM34(1-84:86) Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JM34_9BACT E=6e-15 s/c=0.97 id=30% cov=88% MILARIDGHATSSFCDASLKGQTIVLCTPVDENGEDAGFPFAALDPLGAGRHAIVFITTdGSWSQKTTGHDDSPIRNQVIGLVD------------ >UniRef50_B3QS52(1-94:97) Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QS52_CHLT3 E=2e-16 s/c=0.92 id=28% cov=98% MLLCRVIGSVVSTHKNKNLAQAKLLFVKPVDVNQKfTKEREFIAIDTVDAGEGDLVLVAqEGSVVKQIMQSKFVPANAIILGVVDGLHICESET--- >UniRef50_B0P8I8(1-90:95) Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8I8_9FIRM E=8e-17 s/c=0.98 id=29% cov=96% MRVAQVVGNIVSTVKDPSHAGQKLMIVDFLDGAGRRTGENAVVFDAAQAGVGDVVLVSTDGGASAIFLGKHVIADMTICGILDSICLDGE----- >UniRef50_Q3SES0(1-84:105) Carboxysome protein B n=2 Tax=Thiobacillus denitrificans RepID=Q3SES0_THIDA E=4e-15 s/c=0.98 id=32% cov=89% MEIMRVMSDLVCTRRIPGLYSASLRVLA------DQKGVLAVAVDPVGVPEGKWVFTAGGSAARYGAGDYRILTDLTILGIIDQWDVVDG----- >UniRef50_A1WFN9(1-79:94) Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=8 Tax=Bacteria RepID=A1WFN9_VEREI E=1e-14 s/c=1.02 id=30% cov=84% MIRARVNGKLWSTRHLDSLPVGALLEVET------ESGAKLIAFDPLGCAEGESVLVTQGSVAAAYFPNRPVPIDALIIGSIDEV---------- >UniRef50_D2QXB1(1-94:94) Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=3 Tax=Planctomycetaceae RepID=D2QXB1_9PLAN E=1e-14 s/c=0.86 id=31% cov=95% MRIAKIVGTVTLSRCHDTFVGASLRLAVPmtlpeLRGETQPAADEIVVWDDLGAGLGSMIAVSEGGEAAQPFRPKDKPVDAYAAAIFDDLRLDP------ >UniRef50_A0KHX1(1-81:85) Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=16 Tax=Gammaproteobacteria RepID=A0KHX1_AERHH E=3e-12 s/c=0.90 id=33% cov=85% MILAKVTGHVVATQKCDELRGSNLLLITQLDDQQQPMKdRSWVAVDSVGAGMHDVVLAEE-----YLALNRDRYKAMSVVAIVEKV---------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 4820 0 0 Q 2 * * 6303 4096 3585 * 5503 2539 3902 2897 * 4638 * 2824 2896 * * 5890 * 3086 2 0 * * * * * * 4820 0 0 I 3 * * * * 5920 * * 1573 6127 1292 4227 * 5399 * 5597 * 6106 3400 * 5812 3 0 * * * * * * 4820 0 0 G 4 952 4112 * * * 1691 * * * 5704 4462 * * * * 5684 * 5845 6162 * 4 0 * * * * * * 4820 0 0 R 5 * * * 4341 * * * 5196 1440 5909 * * * 3585 1494 * 3850 6218 * 5877 5 0 * * * * * * 4832 0 0 V 6 * * * * * * * 3412 * 4728 * * * * * * * 204 * * 6 0 * * * * * * 4832 0 0 R 7 * * 4615 5690 * * * 1751 5106 3474 6103 5623 * 5163 4528 * 3185 1700 * * 7 0 * * * * * * 4832 0 0 G 8 * * 3874 * * 320 * * 4837 * * 5528 * * 5752 4167 * * * * 8 0 * * * * * * 4832 0 0 T 9 5809 * 4469 4356 * * 3759 * 4365 * * 2734 5017 3898 3787 2259 2161 6320 * * 9 0 * * * * * * 4832 0 0 V 10 3514 5978 * * * * * 3359 * 2193 * * * * * * 5409 845 * * 10 0 * * * * * * 4832 0 0 V 11 * * * * * * * * * * * * * * 5409 * 2477 835 2082 * 11 0 * * * * * * 4832 0 0 S 12 1125 4214 * * 5424 * * * * 3347 * * * * * 1623 5752 5446 * * 12 0 * * * * * * 4832 0 0 S 13 * * * 5994 * * * * * * * * * * * 2679 272 * * * 13 0 * * * * * * 4837 0 0 Q 14 4529 * * * 5442 * 4563 4206 3049 5913 * 5906 * 2736 1621 4646 4901 2896 * * 14 0 * * * * * * 4837 0 0 K 15 * 3588 * * * * 5627 * 586 5429 5822 * * * 2401 * * * * * 15 0 * * * * * * 4837 0 0 E 16 4163 4714 2166 3027 * * 2335 4199 * 4252 * 4795 * * * 3709 4631 3345 * 7905 16 0 * * * * * * 4837 0 0 P 17 3566 * 2452 2216 5756 * 5365 * 4746 * * * 1464 6332 5110 5913 5873 * * * 17 0 * * * * * * 4837 0 0 S 18 4334 * 4844 4654 6910 2275 6029 * 4668 6459 * 4203 * 4666 4805 1497 4003 5040 5756 * 18 0 * * * * * * 4837 0 0 M 19 * * * * 3780 * 5220 6402 * 582 2674 * * * * * * 4894 * 5049 19 0 * * * * * * 4830 0 0 V 20 3472 * 5429 3932 5744 4070 * 4311 2900 4895 * 2866 4458 3644 4047 5593 4648 2978 * 6122 20 0 * * * * * * 4830 0 0 G 21 * * * * * 498 3825 * * * 6498 4367 * 5721 6329 3517 5452 5633 * * 21 0 * * * * * * 4830 0 0 V 22 3011 5177 5363 6467 4004 3333 5492 6008 3342 3100 4878 * * 3647 4107 4808 4165 4685 4474 4292 22 26 * 5792 * * * * 4830 0 0 K 23 4851 * * * * * 5825 * 840 * * 4669 5244 * 3277 2726 3859 * * * 23 0 * * * * * 0 4803 0 1000 F 24 * * * * 2892 * * 4832 * 460 4655 * * * * * 5825 * 4454 * 24 0 * * * * * 0 4803 0 1000 L 25 6481 * * * 5804 * * 4727 * 986 2501 * * 5110 2888 * * 3514 * * 25 15 6643 * 0 * * 0 4803 1000 1000 L 26 * 5818 * 4851 5673 * * 2081 * 1799 3885 * * * * * 5433 1674 * * 26 0 * * * * * 0 4803 0 1000 L 27 3726 4624 * * * * * 3510 * 3235 6030 * * * * * 6329 595 * * 27 11 * 6993 * * * 0 4803 0 1000 Q 28 4153 * 4474 2149 * * * * 3950 5280 * * 6626 1381 4372 5425 4009 4180 * * 28 241 5290 2966 2121 377 965 1036 4807 1793 1488 L 29 5194 6497 * 4790 4128 * * 3835 * 4638 5877 * 994 4467 3248 6602 4401 5022 * * 29 149 4453 4255 2053 398 * 0 4668 1956 2398 I 30 6099 5415 * 6374 * * * 2273 6438 1386 3864 * * 5300 * * 4674 2536 5545 5524 30 73 5429 5273 2576 265 * 0 4605 1441 2855 D 31 * * 1262 3777 * 3406 5353 * 4192 4091 * 3590 * 6274 4174 5086 3503 6786 * * 31 56 5498 5994 2603 259 3469 137 4598 1454 3130 E 32 2684 * 3651 3152 * 3940 6543 5845 3886 4826 6152 6256 3678 4712 4808 3725 4168 3021 6429 6508 32 14 6696 * 3322 152 3443 139 4594 1000 3119 A 33 2854 * 2459 2258 * 3787 5344 * 4108 4827 6551 3249 5211 3963 6444 5511 4640 * * * 33 14 * 6698 * * 1733 516 4601 0 3120 G 34 * * 4404 2964 6269 1370 4438 * 5046 4463 * 6313 6867 3480 4277 3588 5408 * * 4883 34 121 3640 * 3593 125 602 1552 4627 2406 2739 Q 35 6472 * 3353 3484 * 3827 6536 5548 3370 4503 * 3463 * 2759 2746 3028 5350 5411 * * 35 124 3812 6481 2044 401 602 1551 4788 2505 1892 P 36 4673 * 3190 3090 6938 4881 6654 5818 4539 6664 * 5191 1533 4352 4403 4915 3925 4541 * * 36 34 7066 5991 2585 263 983 1018 4826 1000 1488 L 37 3132 * 3327 5099 5792 3382 * 4674 2774 4020 5214 6886 5379 5548 3934 4607 2818 3900 * * 37 55 6893 5115 2000 415 * 0 4802 1000 1547 P 38 3914 * 6663 4140 * 630 * * 4286 * * * 5585 * 4227 3391 * * * * 38 40 5196 * 0 * 1254 784 4804 1000 2373 Q 39 3040 * 3627 2596 4032 4592 6238 * 4354 * * 3840 6561 3991 2300 3777 4898 6109 * * 39 27 * 5741 * * * 0 4830 0 1883 Y 40 3583 6169 6205 3415 * 6385 * 3684 4563 3201 4957 6068 2748 5110 4371 3360 3309 4401 * 4805 40 13 6769 * 3000 193 1291 758 4824 1000 2258 E 41 4556 * 5750 3455 2724 * 6431 2859 5300 2310 5576 6489 * 3729 6480 4738 * 3752 5208 4000 41 48 4921 * 2516 277 0 * 4830 1545 1883 V 42 4707 * * * * * * 2131 * 3515 * * * * * * * 631 * * 42 0 * * * * * * 4828 0 0 A 43 472 4801 * * * * * 6482 * * * * * * * 6365 6333 2270 * * 43 0 * * * * * * 4828 0 0 A 44 2232 6678 * * 4866 6252 * 3014 * 3574 5791 * * * * * 5123 1423 4738 3943 44 0 * * * * * * 4828 0 0 D 45 * * 0 * * * * * * * * * * * * * * * * * 45 0 * * * * * * 4828 0 0 G 46 3044 5278 5648 3938 6851 5814 6154 4914 5434 4107 5013 4931 2455 * 4062 3106 2742 5373 * 5864 46 0 * * * * * * 4828 0 0 V 47 4268 * * * * * * 2287 * 2095 * * * * * * 6011 1019 * * 47 0 * * * * * * 4828 0 0 G 48 * 6692 4982 * * 163 * * * * * 6219 * 4635 * 6418 * * * * 48 23 6011 * 0 * * * 4828 1000 0 A 49 302 3571 * * * * * * * * * * * * * 4567 4777 5247 * * 49 0 * * * * * * 4828 0 0 G 50 5631 * * * * 389 5452 * 3979 * * 6356 4675 * 4612 4737 * * * * 50 0 * * * * * * 4828 0 0 L 51 5978 * 5791 2914 * * * 2265 4596 4073 5226 4412 2495 4827 5456 6505 5392 2468 * * 51 0 * * * * * * 4828 0 0 D 52 * * 4895 * * 201 3899 * * * * 6252 * * * * 5914 * * * 52 0 * * * * * * 4828 0 0 E 53 5456 * 1185 1239 * * * * 4675 * * 4834 * * * 4661 * * * * 53 0 * * * * * * 4828 0 0 W 54 * * 6880 * * * 4556 3121 4102 2752 5648 6219 * 4172 3360 5631 3943 3440 2450 3630 54 0 * * * * * * 4828 0 0 V 55 * * * * * * * 3557 * * * * * * * * * 128 * * 55 0 * * * * * * 4828 0 0 L 56 4064 * * * 3130 5674 * 2668 * 916 3788 * * * * * * * * 4415 56 0 * * * * * * 4828 0 0 F 57 4323 5257 * * 4680 * * 2580 * 2347 * * * * * * 3341 1524 5978 4087 57 50 4886 * 0 * * * 4828 1830 0 S 58 2550 4350 * 5226 * * * 3741 * * * * * * * 2416 1793 2302 * * 58 28 5720 * 0 * * * 4828 1000 0 R 59 4585 5671 6569 2287 * 3436 * * 5891 5312 6333 * * 3448 2923 2342 2684 * * * 59 166 3605 5226 0 * * * 4828 2250 0 G 60 * * 5218 5391 * 249 * * * * * 5767 * * * 3825 * * * 5737 60 0 * * * * * 0 4786 0 1000 S 61 3219 * * 4316 6280 3995 * * 5958 * * 5141 5813 * 4944 737 4066 * * 6316 61 0 * * * * * 0 4786 0 1000 A 62 1567 * * 2760 * 3285 5982 * * * * * 6673 6503 * 2063 4547 4238 5389 5900 62 35 5391 * 0 * * 0 4786 1000 1000 A 63 386 * * * * * * 5391 * * 5900 * * * * 3993 4247 3663 * * 63 0 * * * * * 0 4786 0 1000 R 64 3112 * * * * * 5311 * 5629 * 5307 * * 4803 598 4225 3972 * * * 64 28 6468 6938 0 * 0 * 4786 1000 1000 Q 65 3209 * 4051 3667 4328 * 3858 4683 3958 4201 4264 6589 * 2406 4478 5563 6289 4763 * 3190 65 0 * * * * * 0 4830 0 1000 V 66 2071 * 6485 6243 5826 4862 6142 3482 * 3714 3599 * 2944 6330 * 3687 4044 3031 * 5628 66 0 * * * * 0 * 4830 0 1000 A 67 2427 5560 4845 5099 1936 * 6242 6489 * 2287 4280 * 5309 * 6252 6490 3760 3977 * * 67 53 * 4794 * * * * 4828 0 0 G 68 5050 6443 4122 3805 * 1540 5455 * 3958 4542 * 4878 4066 5113 3437 4035 4412 5339 * 6996 68 48 5355 6928 1120 889 0 * 4804 1479 1834 S 69 4205 * 2511 4537 4166 3128 5454 * 4123 5870 6551 3097 3239 * 5146 3633 3554 6786 * 5428 69 0 * * * * 0 * 4832 0 1000 E 70 * * 2680 2861 * 3896 6490 * 2601 6333 * 4469 2744 3503 3392 6010 5600 6558 * 5247 70 100 * 3896 * * * * 4828 0 0 K 71 4605 * 2748 3671 4769 5572 4451 * 3370 5913 * 2951 5043 4337 3772 3051 3436 5687 * * 71 32 5492 * 1407 683 0 * 4755 1553 2381 R 72 3226 5420 * 5258 6473 * * 3479 4064 3766 * * 5204 6505 4039 2932 2873 2138 * 5993 72 0 * * * * * * 4828 0 0 P 73 4016 * 6219 * 6356 * * 6146 * 4178 * * 379 * * * 5040 5870 * 5226 73 0 * * * * * * 4828 0 0 V 74 3545 * * * * * * 1787 5226 3716 * * * 6219 * 4558 2619 1723 * * 74 20 6219 * 2322 322 * * 4828 1000 0 D 75 5226 * 273 * * * * * * * * 5720 * * 2980 * * * * * 75 0 * * * * * * 4828 0 0 A 76 1069 5436 * * * * * * * 2346 3262 4633 * * 5340 4544 5978 * 3722 * 76 0 * * * * * * 4828 0 0 V 77 1983 6242 * * * * * 4273 * 3773 5502 * * 5456 * 2897 2047 3122 * 3775 77 0 * * * * * * 4828 0 0 V 78 5648 5674 * * * * * 990 * * * 5487 * * * 5434 6144 1331 * * 78 0 * * * * * * 4828 0 0 I 79 3448 5185 * * * 3803 * 1889 * 4896 4730 * * 5405 * * * 1170 * * 79 0 * * * * * * 4831 0 0 G 80 2469 4530 * * * 366 * * * * * * * * * * * * * * 80 0 * * * * * * 4831 0 0 I 81 * * * * 6296 * 6554 309 * 3442 * * * * * 5624 * 4124 * * 81 0 * * * * * * 4831 0 0 I 82 4846 5917 * * 5640 * * 1089 * 3216 * * * * * * * 1511 * * 82 0 * * * * * * 4831 0 0 D 83 * * 39 5220 * * * * * * * * * * * * * * * * 83 0 * * * * * * 4831 0 0 T 84 * * 4456 2270 * 5307 3205 * 3751 6052 * 5265 * 3230 5034 2378 2569 * * * 84 0 * * * * * * 4659 0 0 V 85 * 4291 * 6179 3385 * * 2654 * 2971 5687 * * * * * 5051 1266 3516 * 85 0 * * * * * * 4519 0 0 S 86 * 5143 2013 1525 * * 2711 5438 * * * 5521 * 4257 5013 4216 5715 5453 * * 86 0 * * * * * * 4396 0 0 V 87 4307 * 4995 * 3664 5399 * 3209 * 2857 4579 * 4922 * 5208 4384 5748 1318 * * 87 0 * * * * * * 4356 0 0 D 88 4994 4329 1463 4244 * 3042 * * * 5007 4345 5428 4042 * * 3122 * 3282 * * 88 0 * * * * * * 4179 0 0 N 89 * * 4373 2199 * 1809 * * 4135 * * 3169 2490 * * 4994 3814 * * * 89 0 * * * * * * 4179 0 0 R 90 2696 * 4647 1964 * 2000 * * 3135 * * * * 4577 3564 4076 * * * * 90 0 * * * * * * 3868 0 0 P 91 * 3636 * 2529 * * * * * * * * 4066 * 4154 3047 2991 1382 * * 91 0 * * * * * * 3445 0 0 L 92 * * * * * * * 1823 * 2374 * * * * 3855 * 1755 3508 3813 * 92 0 * * * * * * 3358 0 0 Y 93 * * * * 905 * * * * * * * * * * * * * * 1101 93 0 * * * * * * 3042 0 0 S 94 * * * * * * 3651 * 3529 * * 2263 * 3695 1950 1789 * * * * 94 0 * * * * * * 3042 0 0 K 95 * * * * * * * * 247 * * * * * 2666 * * * * * 95 0 * * 0 * * * 2832 0 0 //