HHsearch 1.5 NAME c4jvzC_ FAM FILE c4jvzC_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4jvzC_.a3m DATE Sat Sep 7 08:24:50 2013 LENG 97 match states, 97 columns in multiple alignment FILT 83 out of 87 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.6 EVD 0.4093 -1.1809 SEQ >ss_dssp CEEEEEEEEECCSSSCGGGTTCCEEEEEEECGGGCEEEEEEEEEESSCCCTTCEEEEEEGGGGGGSTTCTTCCCSEEEEEECSEEEETTEEEEECCC >sa_dssp EDDACACBEDECEEDEEDCEEBDBBCACBBCEECDEDEDECDAABDEEBDEECCADABEDDDADEBEEAEECDBEAAADCCBDECDEEEEEDCDCEE >ss_pred CEEEEEECCEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHCCCCCCEEEEEEEEEEEEEECCCEEEEEEC >ss_conf 9669995538998873887883599999717767666743999970368888899998698876753699987456999988658864857987509 >Consensus MxlakViGxvvaTxKxxxLxGxkLliVqplxxxxxxxgxxxVAvDxvGAGxGdxVlvxxGsxArxxxxxxxxPvDaxIvGIiDxvxxxxxxxxxkxx >c4jvzC_ MKIARVCGTVTSTQKEDTLTGVKFLVLQYLGEDGEFLPDYEVAADTVGAGQDEWVLVSRGSAARHIINGTDKPIDAAVVAIIDTVSRDNYLLYSKRT >UniRef50_D0LHE5(1-95:96) Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=3 Tax=Bacteria RepID=D0LHE5_HALO1 E=2e-21 s/c=1.08 id=34% cov=99% MVLGKVVGTVVASRKEPRIEGLSLLLVRACDPDGTPTGGAVVCADAVGAGVGEVVLYASGSSARQTEVTNNRPVDATIMAIVDLVEMGGDVRFRK-- >UniRef50_B2TJS1(1-82:87) Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=6 Tax=Clostridiales RepID=B2TJS1_CLOBB E=4e-18 s/c=1.13 id=34% cov=86% MIIAKLIDNVWATRKTELLNGFKFMLAEEIG--GSRQGRRLVVVDIISAGIGDRVIICTGASARRMLGSDEVPVDAVVVGIIDE------------- >UniRef50_B5ERU6(1-86:88) Carboxysome peptide B n=10 Tax=Bacteria RepID=B5ERU6_ACIF5 E=4e-16 s/c=1.00 id=29% cov=90% MDIMRVVSDLVATRRIPGLQNASLRVLT------DAKGRISVAADPVGVPPGKWVIAVSGSAARYAAGDYRILTDLTIAGIIDHWDPSGSQT----- >UniRef50_B0P8I8(1-91:95) Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8I8_9FIRM E=1e-17 s/c=1.00 id=28% cov=95% MRVAQVVGNIVSTVKDPSHAGQKLMIVDFLDGAGRRTGENAVVFDAAQAGVGDVVLVSTDGGASAIFLGKHVIADMTICGILDSICLDGEI------ >UniRef50_D2QXB1(1-93:94) Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=3 Tax=Planctomycetaceae RepID=D2QXB1_9PLAN E=2e-16 s/c=0.93 id=33% cov=92% MRIAKIVGTVTLSRCHDTFVGASLRLAVPMTlpelrGETQPAADEIVVWDDLGAGLGSMIAVSEGGEAAQPFRPKDKPVDAYAAAIFDDLRLD------- -- >UniRef50_B3QS52(1-94:97) Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QS52_CHLT3 E=1e-15 s/c=0.90 id=31% cov=90% MLLCRVIGSVVSTHKNKNLAQAKLLFVKPVDVNQKFTKEReFIAIDTVDAGEGDLVLVAqEGSVVKQIMQSKFVPANAIILGVVDGLH----------- >UniRef50_B5JM34(1-84:86) Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JM34_9BACT E=4e-15 s/c=0.98 id=29% cov=87% MILARIDGHATSSFCDASLKGQTIVLCTPVDENGEDAGFPFAALDPLGAGRHAIVFITTdGSWSQKTTGHDDSPIRNQVIGLVD-------------- >UniRef50_Q7UVK4(1-85:95) Similar to ethanolamine utilization protein EutN n=1 Tax=Rhodopirellula baltica RepID=Q7UVK4_RHOBA E=1e-14 s/c=0.95 id=22% cov=88% MQPARVIGHTRATVKHESLQGRRLVLVQPTGVGEKPDGAPLLVLDELGCRVGDRVMLTSETGpIREMTGFETCPARWSVQGLIDE------------- >UniRef50_A1WFN9(1-79:94) Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=8 Tax=Bacteria RepID=A1WFN9_VEREI E=3e-15 s/c=1.05 id=34% cov=82% MIRARVNGKLWSTRHLDSLPVGALLEVET------ESGAKLIAFDPLGCAEGESVLVTQGSVAAAYFPNRPVPIDALIIGSIDEV------------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 4845 0 0 K 2 * * 6324 4127 3522 * 5528 2633 3729 2934 * 4665 * 2926 2739 * * 5874 * 3105 2 0 * * * * * * 4845 0 0 I 3 * * * * 5944 * * 1541 6153 1301 4266 * 5392 * 5611 * 6170 3431 * 5841 3 0 * * * * * * 4845 0 0 A 4 892 4120 * * * 1784 * * * 5699 4477 * * * * 5679 * 5996 6163 * 4 0 * * * * * * 4845 0 0 R 5 * * * 4305 * * * 5305 1420 5927 * * * 3794 1464 * 3735 6211 * 6528 5 0 * * * * * * 4848 0 0 V 6 * * * * * * * 3245 * 4739 * * * * * * * 222 * * 6 0 * * * * * * 4859 0 0 C 7 * 6673 4638 5655 * * * 1688 5168 3472 6126 5639 * 5197 4918 * 3196 1746 * * 7 0 * * * * * * 4859 0 0 G 8 * * 3869 * * 312 * * 4890 * * 5572 * * 5748 4244 * * * * 8 0 * * * * * * 4859 0 0 T 9 5812 * 4481 4362 * * 3784 * 4397 * * 2827 5095 3783 3836 2253 2094 6396 * * 9 0 * * * * * * 4859 0 0 V 10 3571 6046 * * * * * 3374 * 2211 * * * * * * 5402 824 * * 10 0 * * * * * * 4859 0 0 T 11 * * * * * * * * * * * * * * 5402 * 2347 847 2159 * 11 0 * * * * * * 4859 0 0 S 12 1138 4229 * * 5514 * * * * 3203 * * * * * 1644 5748 5440 * * 12 0 * * * * * * 4859 0 0 T 13 * * * 6024 * * * * * * * * * * * 2666 274 * * * 13 0 * * * * * * 4864 0 0 Q 14 4542 * * * 5463 * 4615 4252 2995 5948 * 6025 * 2787 1612 4640 4928 2846 * * 14 0 * * * * * * 4864 0 0 K 15 * 3397 * * * * 5642 * 600 5516 5852 * * * 2427 * * * * * 15 0 * * * * * * 4864 0 0 E 16 4217 4768 2170 3057 * * 2265 4231 * 4263 * 4806 * * * 3732 4614 3354 * 7920 16 0 * * * * * * 4864 0 0 D 17 3596 * 2299 2229 5752 * 5416 * 4749 * * * 1514 6410 5145 5948 6032 * * * 17 0 * * * * * * 4864 0 0 T 18 4527 * 4896 4693 6928 2236 6066 * 4699 6517 * 4249 * 4728 4834 1575 3446 5147 5752 * 18 0 * * * * * * 4864 0 0 L 19 * * * * 3584 * 5242 6364 * 577 2759 * * * * * * 4963 * 5152 19 0 * * * * * * 4861 0 0 T 20 3489 * 5049 3978 5746 4092 * 4450 2964 4896 * 2904 4502 3654 3943 5581 4383 2972 * 6144 20 0 * * * * * * 4861 0 0 G 21 * * * * * 507 3869 * * * 6596 4349 * 5729 5656 3529 5447 5645 * * 21 26 5814 * 1000 1000 * * 4861 1000 0 V 22 3062 5197 5426 6558 3998 3399 5600 5919 3369 2914 4888 * * 3754 3936 4840 4199 4714 4495 4321 22 26 * 5781 * * * * 4861 0 0 K 23 4868 * * * * * 5912 * 878 * * 4704 5190 * 3073 2782 3733 * * * 23 0 * * * * * 0 4832 0 1000 F 24 * * * * 2988 * * 4846 * 435 4709 * * * * * 5852 * 4517 * 24 0 * * * * * 0 4832 0 1000 L 25 5140 * * * 5844 * * 4764 * 995 2535 * * 5197 2942 * * 3543 * * 25 0 * * * * * 0 4832 0 1000 V 26 * 5843 * 4868 5681 * * 2141 * 1859 3937 * * * * * 5458 1563 * * 26 0 * * * * * 0 4832 0 1000 L 27 3831 4644 * * * * * 3534 * 3270 6061 * 5802 * * * 6336 612 * * 27 82 * 4183 * * * 0 4832 0 1000 Q 28 5020 * 4428 2134 * * * * 3838 6637 5746 * * 1294 4044 5470 3899 4707 * * 28 151 6969 3448 3322 152 2414 300 4803 1000 2325 Y 29 6176 * 5503 4301 4181 * * 3855 * 5069 5936 * 1038 4501 3391 6563 3936 5058 * 6548 29 103 5078 4675 2675 246 1991 418 4728 1526 2565 L 30 4587 5443 * 6538 * * * 2577 6270 1433 3297 * * 4883 5865 * 4792 2602 * 5627 30 143 4512 4305 2927 203 * 0 4706 1912 2736 G 31 5443 * 1191 6244 6283 3045 6442 * 4332 3954 * 3769 5046 5380 5092 5171 3784 6792 * * 31 82 5188 5158 2534 274 * 0 4674 1617 3404 E 32 2674 6498 3201 3670 * 3796 6361 5222 5093 4718 6116 5435 3924 4310 4851 3803 4032 3025 6496 6449 32 50 4884 * 1954 431 2203 353 4660 1576 3383 D 33 3705 * 2128 2241 * 4747 5515 * 3547 5188 6406 3492 4895 4016 5084 4445 4662 * * * 33 18 * 6298 * * 1374 704 4704 0 3133 G 34 3810 * 5733 3429 * 1210 4209 * 3949 4534 * * 5678 3560 4865 4897 5890 * * 4886 34 96 4260 6374 2943 201 459 1876 4770 2246 2874 E 35 4977 * 3459 2886 * 3529 * 5551 3240 5464 * 3510 5796 3215 3291 2831 5263 5421 * * 35 99 4467 5583 2895 208 544 1671 4828 2129 1942 F 36 4418 * 3594 3079 4439 5486 6656 5840 4863 5520 * 4726 1716 4751 3921 5001 3820 4243 * * 36 11 6987 * 2585 263 1546 605 4857 1000 1864 L 37 3186 * 3379 5158 7011 3735 * 5127 2871 4124 5260 6900 5570 4679 3800 3959 2600 3946 * * 37 29 * 5646 * * * 0 4857 0 1529 P 38 4122 * * 4801 * 733 * * 3584 * * * 3853 6563 3989 4024 5857 * * * 38 79 5162 5300 1000 1000 1931 439 4853 1604 2122 D 39 3421 * 2734 2391 4272 4239 6526 * 4299 * * 3775 6573 4247 2740 3649 5783 6019 * * 39 14 * 6700 * * 2053 398 4836 0 2290 Y 40 3460 6204 6246 3519 5698 5476 * 3622 5034 3205 4848 6121 2773 6165 3570 4006 3371 4444 * 4838 40 59 5024 6725 1804 487 1231 801 4834 1527 2309 E 41 4234 * 5637 3359 2761 * 5489 2710 * 2375 5614 6132 * 3701 6490 4245 * 3649 * 4090 41 117 3688 * 1880 458 0 * 4850 2561 2047 V 42 4726 * * * * * * 2244 * 3533 * * * * * * * 589 * * 42 0 * * * * * * 4858 0 0 A 43 477 4796 * * * * * 6390 * * * * * * * 6376 6340 2255 * * 43 0 * * * * * * 4858 0 0 A 44 2304 6686 * * 4881 6235 * 3055 * 3596 5780 * * * * * 5131 1399 4309 4034 44 0 * * * * * * 4858 0 0 D 45 * * 0 * * * * * * * * * * * * * * * * * 45 0 * * * * * * 4858 0 0 T 46 2991 5352 4914 3996 6812 6751 6178 4953 5519 3981 4976 4934 2455 * 4269 3130 2716 5461 * 5911 46 0 * * * * * * 4858 0 0 V 47 4279 * * * * * * 2301 * 2058 * * * * * * 5920 1032 * * 47 0 * * * * * * 4858 0 0 G 48 * 6747 4997 * * 160 * * * * * 6207 * 4651 * 6470 * * * * 48 24 5920 * 0 * * * 4858 1000 0 A 49 301 3576 * * * * * * * * * * * * * 4584 4768 5268 * * 49 0 * * * * * * 4858 0 0 G 50 5643 * * * * 386 5448 * 3983 * * 6344 4688 * 4617 4773 * * * * 50 0 * * * * * * 4858 0 0 Q 51 5994 * 5780 3025 * * * 2305 4631 3974 5281 4429 2511 4601 5472 6730 5044 2428 * * 51 0 * * * * * * 4858 0 0 D 52 * * 4872 * * 190 3933 * * * * 6235 * * * * 6564 * * * 52 0 * * * * * * 4858 0 0 E 53 5472 * 1181 1280 * * * * 4688 * * 4828 * * * 4302 * * * * 53 0 * * * * * * 4858 0 0 W 54 * * 6875 * * * 4583 3243 4147 2642 4914 6207 * 4265 3354 5643 3970 3540 2457 3660 54 0 * * * * * * 4858 0 0 V 55 * * * * * * * 3408 * * * * * * * * * 143 * * 55 0 * * * * * * 4858 0 0 L 56 3793 * * * 3140 5835 * 2681 * 919 3948 * * * * * * * * 4397 56 0 * * * * * * 4858 0 0 V 57 4339 5611 * * 4839 * * 2647 * 2370 * * * * * * 3338 1433 5994 4129 57 50 4873 * 0 * * * 4858 1854 0 S 58 2608 4199 * 5281 * * * 3716 * * * * * * * 2351 1821 2316 * * 58 27 5729 * 0 * * * 4858 1000 0 R 59 4584 5612 6500 2246 * 3312 * * 5911 5326 6340 * * 3417 2960 2413 2723 * * * 59 161 3646 5281 0 * * * 4858 2247 0 G 60 * * 5244 5384 * 248 * * * * * 5756 * * * 3832 * * * 5734 60 0 * * * * * 0 4821 0 1000 S 61 3296 * * 4307 6304 3721 * * 5974 * * 5117 5834 * 4973 751 4080 * * 6392 61 0 * * * * * 0 4821 0 1000 A 62 1544 * * 2691 * 3311 5894 * * * * * 6792 6525 * 2121 4572 4246 5405 5930 62 35 5384 * 0 * * 0 4821 1000 1000 A 63 380 * * * * * * 5384 * * 5930 * * * * 4007 4275 3691 * * 63 0 * * * * * 0 4821 0 1000 R 64 2964 * * * * * 4966 * 5627 * 5327 * * 4825 626 4251 4087 * * * 64 23 * 6011 * * 0 * 4821 0 1000 H 65 3214 * 4040 3694 4462 * 3710 4709 3954 4039 4064 6590 * 2376 4454 6641 6313 5123 * 3197 65 0 * * * * 1108 899 4864 0 1478 I 66 2081 * 6487 6228 5854 4868 6167 3368 * 3765 3611 * 2857 6404 * 3655 4159 3104 * 5641 66 0 * * * * 0 * 4861 0 1000 I 67 2463 5539 5394 5169 1899 * 6276 5639 * 2357 4261 * 5606 * 6235 6492 3629 3812 * * 67 69 * 4425 * * * * 4858 0 0 N 68 4714 6493 3862 4070 * 1650 5349 * 3977 4574 * 4565 4792 5067 3203 3866 4178 5294 * 6998 68 48 5542 6489 1012 988 0 * 4804 1492 2018 G 69 4252 * 2557 4544 4170 2779 5459 * 4150 5996 5832 3110 2838 * 5099 3837 4137 6712 * * 69 40 * 5208 * * 0 * 4851 0 1000 T 70 * * 2824 3022 * 4175 6467 * 2445 6322 * 4432 2978 3661 3392 5973 4307 6704 * 4344 70 51 5647 6055 1088 917 0 * 4849 1617 1672 D 71 4658 * 2479 3622 4858 4690 4275 * 3640 5876 * 3030 4297 4799 4179 3302 3404 5842 * * 71 15 6560 * 2000 415 0 * 4849 1000 1000 K 72 3346 5413 * 5269 6397 * * 3514 3613 3729 * * 5266 5664 4278 2947 3035 2107 * 6092 72 15 6602 * 0 * * * 4858 1000 0 P 73 4038 * 6207 * 6344 * * 6165 * 4184 * * 376 * * * 5034 5842 * 5281 73 0 * * * * * * 4858 0 0 I 74 3557 * * * * * * 1780 5281 3756 * * * 6207 * 4538 2563 1745 * * 74 20 6207 * 2322 322 * * 4858 1000 0 D 75 5281 * 268 * * * * * * * * 5729 * * 3000 * * * * * 75 0 * * * * * * 4858 0 0 A 76 1058 5452 * * * * * * * 2368 3338 4654 * * 4994 4552 5994 * 3744 * 76 0 * * * * * * 4858 0 0 A 77 1899 6276 * * * * * 4336 * 3790 5475 * * 5472 * 2921 2054 3381 * 3585 77 0 * * * * * * 4858 0 0 V 78 4914 5835 * * * * * 1026 * * * 5526 * * * 5519 6196 1318 * * 78 0 * * * * * * 4858 0 0 V 79 3278 5193 * * * 3795 * 2024 * 4910 4798 * * 5398 * * * 1124 * * 79 0 * * * * * * 4861 0 0 A 80 2282 4622 * * * 408 * * * * * * * * * * * * * * 80 0 * * * * * * 4861 0 0 I 81 * * * * 6319 * 5839 316 * 3474 * * * * * 5635 * 4140 * * 81 0 * * * * * * 4861 0 0 I 82 4583 5948 * * 4907 * * 1119 * 3271 * * * * * * * 1537 * * 82 0 * * * * * * 4861 0 0 D 83 * * 38 5278 * * * * * * * * * * * * * * * * 83 0 * * * * * * 4861 0 0 T 84 * * 3192 2382 * 4746 3457 * 3904 6064 * 5378 * 3494 5122 2531 2521 * * * 84 0 * * * * * * 4764 0 0 V 85 * 5244 * * 3458 * * 2717 * 2849 5706 * * * * * 5082 1274 2948 * 85 0 * * * * * * 4578 0 0 S 86 * 5337 2287 1473 4789 * 3182 4966 * * * 5624 * 4431 4392 3645 5907 5584 * * 86 0 * * * * * * 4565 0 0 R 87 5716 * 5383 3806 3916 5786 * 5195 4207 2814 5561 * 4422 5486 3153 4632 6005 1648 * * 87 0 * * * * * * 4491 0 0 D 88 5165 * 1309 2830 * 3391 * * * 5159 5398 4170 5447 * * 3005 * 3684 * * 88 0 * * * * * * 4332 0 0 N 89 * * 4639 2606 * 1225 * * 3864 * * 2728 5418 * * 4631 3564 * * * 89 0 * * * * * * 3841 0 0 Y 90 2555 * 4541 2007 * 2064 * * 5184 * * * * 3652 * 3292 * * * 3476 90 0 * * * * * * 3784 0 0 L 91 * 3706 * 4620 * * * 3765 * 2855 * * * 3406 * 3218 3276 1450 * * 91 0 * * * * * * 3490 0 0 L 92 * * * * * * * 2456 * 1830 * * * * 3885 * 1674 3422 4010 * 92 0 * * * * * * 3335 0 0 Y 93 * * * * 1056 * * * * * * * * * * * * * * 946 93 0 * * * * * * 2946 0 0 S 94 * * * * * * 3498 * 3572 * * 2747 * 3705 1762 1704 * * * * 94 0 * * * * * * 2946 0 0 K 95 * * * * * * * * 230 * * * * * 2765 * * * * * 95 0 * * * * * * 2897 0 0 R 96 * * * * * * * * * * * * * * 0 * * * * * 96 0 * * * * * * 1737 0 0 T 97 * * * * * * * * * * * * * * * * 0 * * * 97 0 * * 0 * * * 1000 0 0 //