HHsearch 1.5 NAME c4jiuA_ FAM FILE c4jiuA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4jiuA_.a3m DATE Sat Jun 15 08:30:36 2013 LENG 105 match states, 105 columns in multiple alignment FILT 105 out of 445 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.0 EVD 0.4472 0.7650 SEQ >ss_dssp CHHHHHHHHHHHHTCCCCCEEEECCCSSCSEEEETTTTEEEECGGGGGSCHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHTTTSCTTHHHHHHHHHHHHH SCCCC >sa_dssp EBEDCBEEACEDAECECEBECDDDEBEEBAADCCDEEABABABDCBCEBEEDBBCAAAAAAAAAACCECEEDCEDACEBADDCAEEEDBDDACEDADEEC ECECD >ss_pred CHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEEECCCCEEEECHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH HHCCC >ss_conf 9358999989861876473589730553367764588858851999946999999999999997430026989899999998689989979999999998 41039 >Consensus xixxxlxxxxxxlgxxxpxkixirxmkxrWGScsxxxgxIxlnxxLxxxpxxxidYVivHELxHlxxxhxNHsxxFwxxvxxxxPxykxxexelrxxxkl xxnxx >c4jiuA_ MVEDLLEHAKDILGYQRPVKVRIRPLKMSIARVSFKYGTITLDPAVLNLEEEEMFYILIHELAHLKAETSYHSSSFWREVEKVFPGERAKEIEDRIMTKL QRNMV >UniRef50_C7RKN6(153-246:252) Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RKN6_9PROT E=5e-26 s/c=1.26 id=24% cov=88% LFAERMAHYAPLLGVGVP-RLSLSAARTRWGSCSQRTG-IRLNWRLIHFPPPVVDYVVAHEVAHLRE--MNHSPGFWSIVARLYPDYRSARDELK----- ----- >UniRef50_A4Y1Q9(172-270:270) Putative uncharacterized protein n=10 Tax=Proteobacteria RepID=A4Y1Q9_SHEPC E=1e-25 s/c=1.18 id=25% cov=94% --ERLAELLPKATWVTGIPSFRVMAMKKQWGSCSTK-GNLMLNPHLVKAPKECIDYVILHELCHIAEH--NHSERFWRLLTQVMPNWKEVKAKLDDMAEM YLN-- >UniRef50_C0QQY1(139-228:236) Zinc metalloprotease n=2 Tax=Bacteria RepID=C0QQY1_PERMH E=9e-20 s/c=1.09 id=22% cov=82% -LETLIPKWEKIIGIKVN-EVKIKKMKTRWGTCNPEAKRIWINLELIKKPIECLEYIIVHEMIHFFEKK--HNKKFKAYMDKFLPKWEA----------- ----- >UniRef50_Q88D69(82-170:179) Putative uncharacterized protein n=16 Tax=Proteobacteria RepID=Q88D69_PSEPK E=7e-06 s/c=0.58 id=21% cov=85% LFDSRLDLTHRALGLNTAVS-RVQGGKLK------AKKEIRIASLFKEAAPQFLRMIVVHELAHLRERD--HNKAFYQLCQHMEPDYHQLEFDLRVY--- ----- >UniRef50_C5EXZ7(117-207:223) Predicted protein n=2 Tax=Helicobacter RepID=C5EXZ7_9HELI E=2e-10 s/c=0.74 id=21% cov=73% -LQIRIPHFANIMNL-FPNKILYGKSYKQLACCYKHTKNLRFSIRLALMPHWVIDSIIIHELAHLRFPH--HQKEFWNLI-------------------- ----- >UniRef50_B8FHM3(145-242:245) Putative uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHM3_DESAA E=6e-07 s/c=0.56 id=22% cov=83% ------------IAWSKPGKIQGKRRSIRFGSFSAQRSLIRIHPSLdsPEIPDYFVEFVVYHELLHAVFPpklaknggrRRVHTPEFKA-MERKFREYRq AVEFERRFISK------ >UniRef50_D0MHM7(30-114:114) Putative uncharacterized protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHM7_RHOM4 E=3e-11 s/c=0.82 id=26% cov=76% ------------IGVEERLReVRIQPMTRKWASVSTR-GRLTLSRDLLDQPAAFRRQVIVHELVHLKLRHGGHTKLFHALVRAYLTQYEGRDA------- ------ >UniRef50_Q6L2Z1(115-213:222) Putative uncharacterized protein n=1 Tax=Picrophilus torridus RepID=Q6L2Z1_PICTO E=2e-14 s/c=0.81 id=21% cov=85% -IENKLNYYKNKYDFDYN-KIVIRNQKTKWGSCSSEN-NLNFNIRIAFIPEILFNYILFHEIVHTRIK--NHNKMFYSYISNEFNNYKKLNDE------- ----- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * 1772 * 1372 2927 * * * * * * 2400 * * 1 0 * * * * * * 3474 0 0 V 2 * * * * 3540 * * 1786 * 1742 * * * * * * * 1621 * * 2 0 * * * * * * 4536 0 0 E 3 5024 * 4469 2062 * * * * 2167 * 5094 4987 2891 3702 2400 * * * * * 3 0 * * * * * * 4601 0 0 D 4 5059 * 1494 3109 * * * 4574 3341 * * 2762 * 4911 4011 4511 3799 * * * 4 0 * * * * * * 4645 0 0 L 5 * 4061 * * 5089 * * 3470 4082 1543 * * * * 1258 * * * * * 5 0 * * * * * * 4736 0 0 L 6 4392 * * * * * * 3172 * 777 5594 * * * * 5227 5461 2413 * * 6 0 * * * * * * 4821 0 0 E 7 4804 * 2741 1701 * 5232 5416 * 2626 * * 2789 4096 4919 * 5002 * * * 5175 7 0 * * * * * * 4915 0 0 H 8 3368 * 4347 2878 4891 * 1746 * 3259 4199 * * 5274 5295 5365 3846 * 5343 * 4122 8 37 5295 * 0 * * * 4994 1000 0 A 9 3170 3684 * * 3351 * * 4313 5196 2921 * 5136 * * * * 4998 3889 2965 2011 9 0 * * * * * * 5016 0 0 K 10 1990 * 5629 3864 * * 4998 5277 2103 4119 * * 3766 5855 3785 3375 4255 * * * 10 0 * * * * * * 5016 0 0 D 11 3787 * 2936 3134 5706 * 5655 4385 3026 * * 2785 3500 4625 3777 4192 5457 5677 * 5090 11 0 * * * * * * 5023 0 0 I 12 2803 * * 5607 5171 4825 * 1943 3807 2472 * 5370 5584 4567 5126 4718 4555 3946 * * 12 68 5184 5756 1585 585 * * 4899 1000 0 L 13 5762 * 5445 * 5480 * 5793 2932 * 1385 2814 6091 * * * * 2963 3902 * 4255 13 0 * * * * * 0 5113 0 1000 G 14 4136 * 5310 6076 * 584 * * * * * 2714 4540 * * 5536 * * 5719 * 14 53 * 4798 * * * 0 5071 0 1000 Y 15 6174 * * * 5428 5648 * 2272 * 1771 * * * * 5529 5517 5787 2329 3641 3291 15 186 * 3051 * * 556 1645 5065 0 2004 Q 16 4267 * 4158 2773 * 4782 * * 3546 * * 2568 * 2410 4222 3029 3460 * * * 16 231 4045 3519 0 * 0 * 5047 1722 2761 R 17 5144 * 4918 2103 5553 3563 * 6081 3218 * 6003 5648 6069 5476 2745 6002 5419 3379 6169 3231 17 77 * 4266 * * 0 * 5225 0 2358 P 18 4400 * 6393 5643 * * * 5418 4944 5974 * 3347 964 4234 3517 3861 6432 * * 5876 18 258 6414 2719 1000 1000 0 * 5265 1000 2141 V 19 3423 5772 * 4056 4565 3683 * 3184 4435 3704 * 4274 4507 5201 4034 4315 3711 2811 * 5488 19 86 6072 4539 0 * 0 * 5207 1000 3457 K 20 4204 5941 6498 4514 * 4808 * 5511 1380 4984 6626 6057 * 6215 2220 3302 4429 * * * 20 77 5003 5604 0 * 585 1585 5222 1651 1948 V 21 * * * * 3893 * * 1526 * 2892 5592 * * * * * 6461 1449 4603 6471 21 17 * 6403 * * 1057 946 5091 0 1587 R 22 4119 6419 5951 4694 6408 4708 6593 6707 2299 5279 6611 * * 3305 1989 3197 4366 5282 * 5042 22 38 5248 * 1425 672 0 * 5114 1555 1107 I 23 6240 * 5991 * 4418 5588 6174 1099 * 3307 5522 * * 6073 * * 6623 1950 * 5964 23 0 * * * * * * 5154 0 0 R 24 * * * 6505 * 5964 * * 1856 4721 5796 6077 5337 3322 1162 5697 5603 6114 * * 24 18 6331 * 1585 585 * * 5154 1000 0 P 25 4535 * 3692 4652 6655 4143 4889 * 2213 4622 6753 4208 2658 5480 3018 3972 5675 5637 * 6364 25 0 * * * * * * 5154 0 0 L 26 5336 * * * 4699 5803 5991 6157 4584 3538 1179 6505 * 2683 5588 4694 3579 * * 6667 26 0 * * * * * * 5154 0 0 K 27 * * 5459 5491 * 6625 * * 960 * * 5428 * 5754 1925 3906 4532 * * 5964 27 0 * * * * * * 5154 0 0 M 28 5062 * * * * 6339 * 5588 3364 5803 4970 4131 * 4124 3392 2197 1697 * 4219 * 28 0 * * * * * * 5154 0 0 S 29 5111 * * 6216 * 4650 * 5801 2001 5829 * 6279 * 3950 966 4935 * 6606 * * 29 26 * 5803 * * * * 5154 0 0 I 30 * * * * 4284 * * 4468 * 4671 * * * * * 4187 * * 305 * 30 0 * * * * * 0 5122 0 1000 A 31 2162 4696 * * * 438 * * * * * * * * * * * * * * 31 0 * * * * * 0 5122 0 1000 R 32 5526 5251 * * * * 6355 * * 6822 * * 5984 * 5803 343 3771 6484 * 5341 32 41 * 5155 * * * 0 5170 0 1000 V 33 4325 623 * * 4111 * * 6079 * 5539 5613 5233 * * * 6011 5253 4398 * 3824 33 18 * 6298 * * 1486 637 5116 0 2054 S 34 * * * * 6454 5937 5491 4820 6065 * * 2787 * 6041 5572 1089 2291 * * 4503 34 121 * 3634 * * 1519 619 5150 0 2113 F 35 3054 * 6758 * 4392 5265 6026 4354 5885 4660 5332 * 2046 6959 5080 2665 2969 6111 6383 4069 35 109 * 3778 * * 343 2241 5069 0 2864 K 36 2613 * 5166 5499 * 6329 5958 * 1702 4688 * 4087 * 4957 2521 3938 4284 5050 * * 36 363 * 2168 * * 378 2118 5163 0 3015 Y 37 5427 * 3897 * * * * * 1941 4331 4895 2698 * 6180 3382 4270 2340 6097 * 4708 37 198 * 2963 * * 158 3272 5118 0 3779 G 38 6208 * * 6085 * 939 6058 * 2757 * 6349 4382 * 5882 2780 4277 6283 * * * 38 23 * 5996 * * 185 3054 5125 0 3445 T 39 4330 * 4323 3860 * 6612 4186 4192 4152 4371 * 2763 * 4505 3595 3223 2609 4448 * 5967 39 0 * * * * 0 * 5267 0 1985 I 40 * * * * * * * 938 * 1646 4568 * * * * * * 3105 * * 40 15 * 6626 * * * * 5275 0 0 T 41 6317 5351 * 5063 * * 4898 4371 5163 4766 4919 3098 * 6365 2327 3108 2320 5254 4957 4302 41 0 * * * * 0 * 5277 0 1000 L 42 * * * * 1748 * * 2390 * 1283 6233 * * * * * * 5347 * 3997 42 0 * * * * * * 5275 0 0 D 43 4571 * 4261 * * * 3926 * * * * 696 * * * 2168 * * * * 43 0 * * * * * * 5275 0 0 P 44 4094 4678 4901 * 5958 * 6067 5064 5034 2363 6168 * 4176 4976 4039 3833 3190 4234 2648 5117 44 0 * * * * * * 5275 0 0 A 45 4067 6306 4794 2824 5096 6466 5191 * 2931 4482 5771 5792 * 3874 1938 4154 5899 6754 * 4085 45 0 * * * * * * 5327 0 0 V 46 4923 5609 * * 6039 * * 3517 * 409 5360 * * * * * 6846 4112 * * 46 23 6009 * 1000 1000 * * 5327 1000 0 L 47 2728 6940 * * 5832 5813 * 2416 6039 2591 3119 * 4738 6322 4879 5113 * 2425 * 5438 47 35 5385 * 0 * * * 5327 1452 0 N 48 3515 * 4392 3553 3387 4559 3577 7034 2663 3419 3107 5421 6286 4496 4452 * 5252 6614 * 5629 48 15 6560 * 0 * * * 5327 1000 0 L 49 2115 6081 * * 3208 5237 6920 4139 4001 2025 4084 * * 5624 5587 * 5895 4183 * 3745 49 0 * * * * * * 5327 0 0 E 50 5128 * 3255 4539 * * * * 6296 * * 6508 588 6614 5529 3423 6695 * * * 50 0 * * * * * * 5327 0 0 E 51 3768 * 3689 2943 5607 6234 6978 4216 3532 3949 5841 4447 2245 4187 4520 4885 5887 5044 * 5758 51 0 * * * * * * 5327 0 0 E 52 3869 * 4033 1810 * 7128 4458 4838 3528 6480 * 4755 3863 3983 5529 3330 5833 6660 4204 5157 52 0 * * * * * * 5327 0 0 E 53 3871 3057 * 4466 3716 6732 * 3116 * 2059 6160 * * 6714 * 6057 * 1988 * 4844 53 0 * * * * * * 5327 0 0 M 54 4766 * * * 5268 * * 1582 * 1761 4870 * * 4677 4781 * 5607 2700 5377 * 54 0 * * * * * * 5327 0 0 F 55 * * 1167 1691 6093 6273 4564 6847 6306 5224 * 5518 * 6875 3716 * 6856 * * 6392 55 0 * * * * * * 5327 0 0 Y 56 4225 * * * 4542 * 5074 * * * 5380 6459 * 6399 * 4625 6152 * * 373 56 0 * * * * * * 5327 0 0 I 57 * * * * * * * 2521 * 4037 * * * * * * * 387 * * 57 0 * * * * * * 5327 0 0 L 58 4669 6466 * * * * * 1481 * 2576 5257 * * * * * * 1332 * * 58 0 * * * * * * 5327 0 0 I 59 2688 4761 * * 5576 * 6322 2915 * 2226 * * * * * * 5386 1510 5900 4787 59 37 * 5305 * * * * 5327 0 0 H 60 * * * * * * 0 * * * * * * * * * * * * * 60 0 * * * * * 0 5284 0 1000 E 61 * * * 0 * * * * * * * * * * * * * * * * 61 0 * * * * 0 * 5284 0 1000 L 62 6909 * * * 4301 * 5305 3492 * 610 3748 * * * * * * 4033 * 4794 62 0 * * * * * * 5327 0 0 A 63 1634 1851 * 5305 * * * 3953 * 3676 * * * * * 4057 3748 3349 * * 63 0 * * * * * * 5327 0 0 H 64 * * * * * * 37 * * 5305 * * * * * * * * * * 64 129 * 3548 * * * * 5327 0 0 L 65 4813 5312 * * 2610 * * 3622 6690 948 5532 * * * 5966 6275 3566 4989 * * 65 24 * 5945 * * * 0 5192 0 2865 K 66 6076 * * 6017 4007 * 4878 2306 2167 3094 5821 * 5718 6436 2910 5333 5901 3344 6624 * 66 275 * 2527 * * 344 2235 5202 0 3254 A 67 4736 5962 * 1708 3407 * 3239 3909 * 4537 * * * 4761 6222 * * 2701 * 2984 67 309 * 2373 * * 3233 162 5297 0 3685 E 68 5009 * 5893 5469 4053 4684 4768 * 2774 4535 * * 1336 4032 2764 * * * * * 68 760 5497 1369 3170 170 1021 980 5225 1000 4197 T 69 * * 3469 * * * 955 * 4572 * * 3805 * 4153 4138 3904 4113 5626 * 5479 69 783 * 1256 * * 1283 764 5150 0 4668 S 70 3025 * * * 5098 3868 3327 3883 5643 2623 2165 5373 4548 * 4226 3532 * * * * 70 0 * * * * 933 1070 4935 0 4778 Y 71 * * 3241 * * 3473 4828 * * * * 564 * 6037 5716 * * 5542 * 4759 71 0 * * * * 0 * 5156 0 4224 H 72 * * * * * * 0 * * * * * * * * * * * * * 72 0 * * * * * * 5327 0 0 S 73 * * 5055 * * 2258 * 6273 6862 * * 2748 * 4189 6657 1122 3912 * * * 73 0 * * * * * * 5327 0 0 S 74 3404 * 4742 4708 * * * 6560 1672 6480 * 5897 2160 3873 3780 3561 5761 6714 * * 74 0 * * * * * * 5327 0 0 S 75 2076 * 4067 2788 * 5839 * 5680 3184 3310 5726 5255 * 5742 2768 4258 5200 6499 * 6732 75 0 * * * * * * 5327 0 0 F 76 * * * * 79 * * * * * * * * * * * * * 5377 5098 76 34 * 5413 * * * * 5327 0 0 W 77 * * * 4828 6008 * 3886 6171 3830 6032 * * * 5068 5399 * * * 944 2259 77 16 * 6529 * * 0 * 5303 0 1452 R 78 2472 * 3698 3352 * 6032 4877 6605 3436 * 5623 2903 * 3600 3039 3155 6284 6715 * * 78 23 * 5997 * * 0 * 5325 0 1000 E 79 5699 5512 * 2606 4201 * 5665 3867 5345 1401 4964 * * 4469 5796 6252 4113 4856 * 4375 79 0 * * * * 0 * 5286 0 1000 V 80 6150 5406 * * * 5483 * 3406 * 1680 3548 * * * * * * 1158 * * 80 0 * * * * * * 5330 0 0 E 81 3066 * 3410 2173 6795 4023 6241 * 4799 4313 * 5519 * 4357 2443 3379 4500 * * * 81 0 * * * * * * 5285 0 0 K 82 3731 5527 5709 4298 6773 * 4905 * 2074 3828 5211 4116 * 3775 2898 2831 5013 5705 * * 82 0 * * * * * * 5285 0 0 V 83 4537 * * 6193 3797 6516 3091 3633 4630 2852 4714 * * 5822 3783 6619 * 2944 6473 2295 83 0 * * * * * * 5203 0 0 F 84 5383 3565 4783 6049 2754 * 6532 4167 * 2281 1931 6956 5228 * * 6700 6775 5089 6817 3930 84 0 * * * * * * 5203 0 0 P 85 * * * 6209 * 4191 7059 * 6290 * * 6193 344 6923 5074 4771 5474 * * 6283 85 0 * * * * * * 5203 0 0 G 86 5087 * 1321 3765 * 3367 4816 * 4119 5362 * 2405 * 5095 * 5190 4751 * * * 86 12 6971 * 0 * * * 5192 1000 0 E 87 5596 6121 * 4377 4367 5268 5140 * * * 5797 4847 * * 6725 * 5648 * 2050 1028 87 34 * 5415 * * * * 5193 0 0 R 88 * * 3414 3141 * * 4951 * 1417 6831 * * * 4145 1794 6022 5895 * * * 88 176 4503 3823 581 1594 * 0 5171 1678 1518 A 89 1728 5673 5467 2810 * 5047 * 4462 4328 4260 5911 * * 3733 3993 3650 5110 3785 * * 89 0 * * * * 1575 590 5192 0 2706 K 90 2630 5955 4557 * * * 4269 3532 3072 2768 * * * 4956 2746 4115 * 2870 * * 90 0 * * * * * 0 5129 0 2343 E 91 5868 * 4565 1074 * * * * 2793 * * 3336 * 4058 2785 5853 * * * * 91 0 * * * * * 0 5117 0 2343 I 92 1739 * 4511 * 3919 3821 * 3802 2271 2790 * * 5972 4638 4637 * * * * * 92 0 * * * * 312 2362 5076 0 2343 E 93 5230 * 3839 784 * * * 5121 3705 * * * * 3707 3691 * * * 4476 5758 93 0 * * * * * 0 4950 0 1000 D 94 5417 * 4602 * * * * 3306 4903 869 5058 * * 4021 2984 4816 * * * * 94 30 5596 * 0 * 0 * 4787 1000 1000 R 95 * * 2778 3978 * * * * 1853 * * * * * 961 * * * * * 95 47 4975 * 0 * * * 4620 1000 0 I 96 3097 * 4872 * 2477 * * 2950 3034 3647 3458 * * * 3066 * * 3379 * 4986 96 0 * * * * * * 4389 0 0 M 97 * * * * * * * 1793 4751 3318 2778 * * * * * * 4098 1959 3152 97 0 * * * * * * 4304 0 0 T 98 3315 4222 * * 3073 * 4448 4400 3938 2131 * * * 4111 * 3556 3804 3868 4121 * 98 0 * * * * * * 4074 0 0 K 99 4259 * * 3315 4121 * * 3110 827 4222 * * * * 4136 * * * * * 99 0 * * * * * * 4074 0 0 L 100 * * * * * * * 3335 * 439 3688 * * * * * * 3543 * * 100 0 * * * * * * 3331 0 0 Q 101 * * * 1320 * * * * * * * * * 2404 * * * 2653 * 1991 101 0 * * * * * * 2709 0 0 R 102 * * * * * * * * * 1375 * * * * 1073 * * * 2846 * 102 0 * * * * * * 2709 0 0 N 103 * * * * * * * * * * * 207 * * * 2900 * * * * 103 0 * * * * * * 2709 0 0 M 104 * * * 2090 * * * * * * 921 * * * 2077 * * * * * 104 0 * * * * * * 2128 0 0 V 105 * * * * * * * * * * * * * * * * * 0 * * 105 0 * * 0 * * * 2128 0 0 //