HHsearch 1.5 NAME c4iitB_ FAM FILE c4iitB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4iitB_.a3m DATE Sat Nov 9 08:23:21 2013 LENG 63 match states, 63 columns in multiple alignment FILT 25 out of 29 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.3 EVD 0.4739 2.0467 SEQ >ss_dssp CCCCCEEEEEEECTTCSSCEEEEEEECSSHHHHHHHHHHHTTTTCTTCEEEEEEGGGCCCCCC >sa_dssp EDEEDDABACCDDDDCEDCEDDCDCEACDDEDACEDADDEDBEEDEECCCECCDCEDDEEEEE >ss_pred CCCCCEEEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHHCCCCC >ss_conf 931233579985378984058766517988999999998521133540399982657503797 >Consensus xxxwxxxEVFvrxxxxxpxxHvGSvxAxxxexAlxxArxxfxRRxxaxsiWvvpxxxixaxxp >c4iitB_ KVYWPLYEVFVRSKQGLSHRHVGSLHAADDQMALENARDAYTRRSEGCSIWVVKASEIVASQP >UniRef50_D0MIX3(10-67:97) Phenylacetate-CoA oxygenase, PaaH subunit n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MIX3_RHOM4 E=7e-17 s/c=1.53 id=47% cov=94% -----LWEVFVQPRTGAPHEHAGSVRATHAEMALQHARDVYARRGPVVSIWVVPTDAIYATRP >UniRef50_Q1IX22(9-68:192) Phenylacetate-CoA oxygenase, PaaB subunit n=5 Tax=Deinococci RepID=Q1IX22_DEIGD E=8e-17 s/c=1.47 id=34% cov=97% ---WSRWEVFKQDAPGKPYQAVGSVHAGDPDHALLTARNVFVRRPSAVSLWTVREADLLTATP >UniRef50_C0Z558(8-65:110) Putative phenylacetate degradation protein n=2 Tax=Paenibacillaceae RepID=C0Z558_BREBN E=5e-15 s/c=1.41 id=32% cov=94% -----IYEVFSQKSVNAPFVQQFSLLAPNKEVALSMARENFLRREPCFNLWVVKRDDIFGLPP >UniRef50_D1C840(2-55:96) Phenylacetic acid degradation B n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C840_SPHTD E=3e-13 s/c=1.41 id=37% cov=86% -----IYEVFRQEREGEPMVHVGNVQAPGDDLARQYAREVYSRRGEATRLWLVPRAAI----- >UniRef50_B9LR06(21-73:124) Putative uncharacterized protein n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=B9LR06_HALLT E=2e-06 s/c=1.01 id=30% cov=84% -----RFEVFVREREADPLRHVGTVTAPTPDAAHGEASKLFAWY--ARDVWVCPADETH---- >UniRef50_C7PJU5(29-87:122) Phenylacetic acid degradation B n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PJU5_CHIPD E=9e-18 s/c=1.55 id=38% cov=95% ---WNVFEVFHQEKRGAHHEHVGCVHAPDANLALIFAKEQFGRRKKCVNLWVVRSADILAFD- >UniRef50_C8WU87(20-78:125) Phenylacetic acid degradation B n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WU87_ALIAD E=1e-13 s/c=1.32 id=36% cov=94% ---YDVYEIFVQASDLDPHVHVGSLLAPSPEWALQLARENFLRRADAVSVWAVRRGDVHAT-- >UniRef50_D2RY10(2-54:105) Phenylacetic acid degradation B n=4 Tax=Halobacteriaceae RepID=D2RY10_9EURY E=5e-13 s/c=1.43 id=41% cov=86% -----IWEVFRQEKTGQYHTHCGNVHASDREMARQFAAIQHGRRKPTNSLWVVPREEI----- >UniRef50_A0Z3K3(15-68:81) Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z3K3_9GAMM E=0.0001 s/c=0.88 id=32% cov=63% ---WDYFEVFAREELDGPLFHLGSVSAPNRAAAVGQARMVYS--------------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * * * * * * 0 * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 V 2 * * * * * * * * * * * * * * * * * 0 * * 2 0 * * * * * * 1000 0 0 Y 3 * * * * 1000 * * * * * * * * * * * * * * 1000 3 0 * * * * * * 1601 0 0 W 4 * * * * * * * * * * * * * * * * * * 386 2091 4 0 * * * * * * 2831 0 0 P 5 * * 2332 * * 3956 * * * * * 3260 1291 2992 * 3347 * * * * 5 0 * * * * * * 2831 0 0 L 6 * * * * * * * 2169 * 1968 * * * * 2131 * * 2061 * 4207 6 0 * * * * * * 3356 0 0 Y 7 * * * * 2031 * * * * * * * * * * * * * 1093 1803 7 0 * * * * * * 3525 0 0 E 8 * * * 0 * * * * * * * * * * * * * * * * 8 0 * * * * * * 3525 0 0 V 9 * * * * * * * 3475 * 3695 * * * * * * * 264 * * 9 0 * * * * * * 3525 0 0 F 10 * * * * 111 * * 3760 * * * * * * * * * * * * 10 0 * * * * * * 3525 0 0 V 11 4768 * * * * * 4430 4615 3046 3909 * * * * 3427 3301 * 1017 * * 11 0 * * * * * * 3525 0 0 R 12 * * * * * * * * * * * * * 1199 825 * * * * * 12 0 * * * * * * 3525 0 0 S 13 3815 * 3046 1464 * 4026 * * 3265 * * * 4913 * 4337 2342 * * * * 13 0 * * * * * * 3525 0 0 K 14 3505 * 2725 3817 * * 4577 * 2165 * * * * * 2778 3125 2604 * * * 14 0 * * * * * * 3525 0 0 Q 15 3880 * 3863 2352 * * 4265 * * 4768 * * 2932 4021 2529 4823 3569 3423 * * 15 0 * * * * * * 3525 0 0 G 16 4705 * 3313 2988 * 1067 * * * 4721 * 4265 * 4265 3760 4577 * * * * 16 0 * * * * * * 3525 0 0 L 17 2223 * 1945 4577 * 4768 * * 4402 2163 * * * 4292 * 2991 * * * * 17 0 * * * * * * 3525 0 0 S 18 3985 * 5123 3725 * * 4430 * * 3760 * 5104 799 * * 4118 * * * 4292 18 0 * * * * * * 3525 0 0 H 19 * * * * 4265 * 1172 * * 1552 4577 * 3760 * * * * * * 4402 19 0 * * * * * * 3525 0 0 R 20 * * * 3651 4768 * * * 3285 * * * * 2301 2014 * 3427 2073 * * 20 0 * * * * * * 3525 0 0 H 21 4402 * * * * * 368 * * * 3760 * * 4265 * * * * 4265 * 21 0 * * * * * * 3525 0 0 V 22 3325 3126 * * * * * 4615 * 4768 * * * 3301 * * * 721 * * 22 0 * * * * * * 3525 0 0 G 23 * * * * 3301 154 * * * * * * * * * * * * * * 23 0 * * * * * * 3525 0 0 S 24 * 4430 * * * * * * * * * 3427 * * * 282 4705 * * * 24 0 * * * * * * 3525 0 0 L 25 * * * * * * * * * 1598 * * * * * * * 579 * * 25 0 * * * * * * 3525 0 0 H 26 4868 * 4265 * * * 1288 * * 2843 * * * 4577 3310 3192 3150 * * * 26 0 * * * * * * 3525 0 0 A 27 0 * * * * * * * * * * * * * * * * * * * 27 0 * * * * * * 3525 0 0 A 28 3413 * 4600 4615 * 2585 * * * * * * 1106 * * 3542 3224 * * * 28 0 * * * * * * 3525 0 0 D 29 * * 1307 4600 * 3752 4913 * * * * 2855 * * * 2073 3807 * * * 29 0 * * * * * * 3525 0 0 D 30 1316 * 3267 3579 * * * * 3423 * * * 2122 * 3510 * * * * * 30 0 * * * * * * 3525 0 0 Q 31 3284 * 1732 1254 * * * * * * * 4430 * 4926 4844 3990 * * * * 31 0 * * * * * * 3525 0 0 M 32 3219 * 4265 4868 * 4823 3046 3782 * 2860 2093 * * 4615 * * 3749 4265 4721 * 32 0 * * * * * * 3525 0 0 A 33 0 * * * * * * * * * * * * * * * * * * * 33 0 * * * * * * 3525 0 0 L 34 * * * * * * 3242 3839 * 874 * * * * 2506 * * 4768 * 3919 34 0 * * * * * * 3525 0 0 E 35 4951 * 5104 2003 * 3736 * 4430 * 2530 * * * 2330 4227 4265 4615 4337 * * 35 0 * * * * * * 3525 0 0 N 36 4026 * * 4705 3359 * 2885 * * 2997 2941 4118 * 2731 * * 4402 3760 * 3596 36 0 * * * * * * 3525 0 0 A 37 0 * * * * * * * * * * * * * * * * * * * 37 0 * * * * * * 3525 0 0 R 38 4292 4823 * 4600 * * * * 4430 * * * * 4337 644 3242 5021 * * * 38 0 * * * * * * 3525 0 0 D 39 * * 1963 1838 * * 3760 4292 3854 * 4768 4402 * 4577 3846 3749 * * * * 39 0 * * * * * * 3525 0 0 A 40 4926 * * * * * * * * 1552 * 2843 * 3359 * 4265 * 1568 * * 40 0 * * * * * * 3525 0 0 Y 41 * * * * 704 * 4292 * * * * * * * * * * * * 1577 41 61 * 4600 * * * * 3525 0 0 T 42 3142 * 3637 * * 2566 * 4571 * 2744 4268 * * * * 3607 2410 3012 * * 42 0 * * * * * 0 3488 0 1000 R 43 * * * * * * * * * * * * * * 400 * * * 2047 * 43 55 * 4738 * * * 0 3421 0 1000 R 44 * * * * * * * * * * * * * * 363 4363 * * * 2525 44 206 * 2907 * * 1029 971 3402 0 1356 S 45 2613 * 4109 3107 * 2425 * * 3115 * * 3981 2858 4633 4860 3559 * * * * 45 0 * * * * 1953 431 3340 0 1527 E 46 * * 3434 1294 * * * * 4256 * * * 1923 * * 2895 * 4345 * * 46 79 * 4236 * * 0 * 3383 0 1462 G 47 1074 3293 * * * 2310 * * * * * * 4851 * * * 4195 2919 * * 47 72 * 4363 * * * 0 3447 0 1000 C 48 4228 3788 * * 4192 * * * * 3633 * 3296 * * 3479 * 4423 1237 * 3706 48 0 * * * * 1000 1000 3416 0 1312 S 49 3719 * 2192 * * * * * * * * 3294 * * 4452 964 4478 * * * 49 0 * * * * 0 * 3437 0 1000 I 50 * * * * * * * 1671 * 1146 * * * * * * * 2095 * * 50 0 * * * * * * 3461 0 0 W 51 * * * * 3761 * * * * * * * * * * * * * 111 * 51 0 * * * * * * 3461 0 0 V 52 3464 * * * * * * * * 2587 * * * * * * 4252 534 * * 52 0 * * * * * * 3461 0 0 V 53 3761 1887 * * * * * * * * * * * * * * * 609 * * 53 0 * * * * * * 3461 0 0 K 54 * * * 4259 * * * * 2477 * * * 912 * 2078 * * * * * 54 0 * * * * * * 3461 0 0 A 55 1497 * * 4252 * 4555 * * * * * * * 4259 2061 2154 4876 * * * 55 0 * * * * * * 3461 0 0 S 56 2063 * 1535 2547 * 3760 * * * * * * * * * 2551 * * * * 56 0 * * * * * * 3461 0 0 E 57 1158 * 1738 2593 * * * * * * * * * 4819 * * * * * 4299 57 0 * * * * * * 3461 0 0 I 58 * * * * * * * 898 * 3929 * * * * * * 4210 1540 * * 58 0 * * * * * * 3346 0 0 V 59 4490 * * * 3414 * 1486 * * 2590 * * * * * * 2534 3243 * 4051 59 0 * * * * * * 3011 0 0 A 60 706 * * * * 3145 * * * * * * * * 3445 3762 3206 * * * 60 0 * * * * * * 2803 0 0 S 61 2485 * * * 3320 * * * * 3145 * * * * * 1462 2028 * * * 61 0 * * * * * * 2803 0 0 Q 62 * * 1313 * * * * * * * * * 2991 2799 3673 2899 3114 * * * 62 0 * * * * * * 2763 0 0 P 63 * * * * * * * * * * * * 0 * * * * * * * 63 0 * * 0 * * * 2406 0 0 //