HHsearch 1.5 NAME c4id3B_ FAM FILE c4id3B_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4id3B_.a3m DATE Thu Jan 10 08:05:06 2013 LENG 87 match states, 87 columns in multiple alignment FILT 106 out of 935 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 8.9 EVD 0.4471 0.7900 SEQ >ss_dssp CTTTTCEEEECSCCSSCHHHHHHHHHHTTCEEESSCCCTTTCCEEECSCCCHHHHHHTTTSCEECTHHHHHHHHHTSCCCGGGGBCC >sa_dssp ECAEEBCACACEEBECDDEEABECADECCBECCEEBDDDEDBCBAAADEBDEECDEDBEECDAACBDAACDACEEEEDCDCEECCDE >ss_pred CCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCHHHHHHHCCCEEECHHHHHHHHHCCCCCCCHHHHCC >ss_conf 955771999828998028999999996198799962688718999468888578996179726379999999981983781565049 >Consensus xiFxgxxixisGxxxxxxxxlxxlixxxGGxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxiVxxxWixdcxxxxkxlxxxxYxlx >c4id3B_ KIFKNCVIYINGYTKPGRLQLHEMIVLHGGKFLHYLSSKKTVTHIVASNLPLKKRIEFANYKVVSPDWIVDSVKEARLLPWQNYSLT >UniRef50_UPI0001757E15(1005-1087:1222) PREDICTED: similar to DNA topoisomerase 2-binding protein 1 n=1 Tax=Tribolium castaneum RepID=UPI0001757E15 E=3e-05 s/c=0.60 id=16% cov=51% -----------------------------------------CTHLICPKParNEKTLSCMASGKwILHASYVDKCASAGKFLPEEEF--- >UniRef50_C9ST22(334-413:853) BRCT-containing protein n=2 Tax=Sordariomycetes RepID=C9ST22_VERA1 E=2e-07 s/c=0.71 id=19% cov=91% --FQDLRICVSNYGGESRIYLENLIKACGATYTKTM--KTENTHLITARDSSEKYEAAKDWGIetINHLWIEESYAKCEKQPVT----- >UniRef50_B8BYN8(70-163:853) Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8BYN8_THAPS E=3e-08 s/c=0.63 id=16% cov=99% -ILTGVVACLSGLDTDLKDHIHNLITRLGGQYVRDFDPMYVTHLILDDVKGSSKYNYvqrnlekdwVRDLRIVRSGWVNACEREGRRVGEERFRL- >UniRef50_B0CNC7(543-633:845) Predicted protein n=3 Tax=Agaricales RepID=B0CNC7_LACBS E=4e-08 s/c=0.65 id=17% cov=100% EVLEGVHILFSSVipldTKPETTEIWRMAHMFGARCSTELTSDiTHVVAAKRGTVKVDMARKRGGIKIVWLAWFTDCIASWQRQDEKPYLL- >UniRef50_O97209(320-403:671) Pescadillo homolog n=8 Tax=Trypanosomatidae RepID=PESC_LEIMA E=5e-07 s/c=0.66 id=16% cov=98% ELFRGLTFFISREVPAKHFAL--VINACGGRVATDYVPSNITHVVVDRPALPPGMKKHDQLEYVQPQYIFDCLNARLVLPVTGYRI- >UniRef50_B9SHS1(751-852:991) Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9SHS1_RICCO E=8e-05 s/c=0.47 id=17% cov=99% -IFHGLQFLLTGFSSRKKREIAGLIQEYGGlvlldvpsppsnirttrKARSNFQRLPIVICSKKLQTTKFLYGCAVNTLILKVKWLADSVAAGSAIPPDK YMI- >UniRef50_A4QTK9(417-502:864) Putative uncharacterized protein n=1 Tax=Magnaporthe grisea RepID=A4QTK9_MAGGR E=1e-05 s/c=0.59 id=14% cov=97% --FESLGIATSGFTGVDLNQIDKTIRQLGARYDERFTANTSMLLCTSLEAVRKQKldlALAWKVPVIQADWLWTCISTGYKVPFRDFM-- >UniRef50_UPI0000E49D6D(225-306:868) PREDICTED: similar to Ect2 protein n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000E49D6D E=0.001 s/c=0.55 id=18% cov=84% --FFGCTLGFVGFTQDDQRHMEEITQTQGGNIETIANDSCTHIVVDENTVAEQVLDYPSKIKVVKQEWFWASIQ------------- >UniRef50_A9RB53(317-406:565) Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RB53_PHYPA E=1e-06 s/c=0.60 id=13% cov=98% ---SGCRVFLTGFNAAEMKKQVNLVLAGGGTRHMEMNDTITHVILGSNSAECGMKEirqlaMWGAVYIVQPAWLEECTRQRRELSADPYLVS # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * 3218 * * * * 1439 * * * * 2062 1815 * * * * * 1 0 * * * * * * 6810 0 0 I 2 * * * * 5080 * * 1182 * 1405 * * * * * * 5924 3082 * 5829 2 0 * * * * * * 8393 0 0 F 3 * * * * 326 * * * * 2649 4541 * * * * * * * * * 3 0 * * * * * * 8715 0 0 K 4 5113 * 3874 2359 4919 6620 4457 * 2354 * 6213 4111 * 4053 3203 3073 6541 4901 * 5619 4 32 * 5494 * * * * 8768 0 0 N 5 * * 3268 5472 * 606 * * 5077 * * 2737 * * * 4754 * * * * 5 19 6276 * 1000 1000 0 * 8758 1000 1070 C 6 5531 2056 * * 3819 * 6464 3746 3949 2414 4311 * * 5621 * 6462 6444 2322 * 4826 6 17 6444 * 0 * * * 8981 1000 0 V 7 6568 5179 * 4298 * * 5025 4567 3246 5510 5549 4296 * 6470 3627 3255 2785 1928 * 4895 7 0 * * * * * * 8984 0 0 I 8 3600 * * * 1564 * * 1711 * 4394 4535 * * * * * * 2448 * * 8 0 * * * * * * 9005 0 0 Y 9 3425 2592 * * 2979 6667 6157 * * 4051 * 5668 * * * 3584 4318 3985 5464 1781 9 59 4632 * 0 * * * 9005 2439 0 I 10 4886 4964 * * 2968 * * 1864 * 2266 * * * * * 5682 5786 1916 * 5568 10 78 4850 5799 2381 307 * * 9001 2438 0 N 11 5003 4522 3973 * * 6398 5401 * 6584 5607 * 2846 6442 * * 1453 2457 3845 * 5183 11 93 4271 6537 2448 292 * 0 8976 2903 1756 G 12 4578 * 6438 6106 * 597 * * 6879 6646 6587 3936 6712 4254 4902 4490 * 4755 * * 12 137 3601 6903 892 1116 594 1567 8957 4041 2327 Y 13 * * 3767 4007 1801 * 4343 3633 5590 2701 * * 4547 6368 * * 5683 4111 * 2829 13 57 5169 6517 1593 581 948 1054 8964 2255 1660 T 14 5256 6388 3308 3301 5122 * * 5467 5716 5559 * 4261 3195 3462 5477 2420 3125 3444 * * 14 35 6653 6158 0 * 948 1054 8974 1000 1702 K 15 4338 * 3049 3511 * 2636 5268 5532 4215 6670 6401 3313 3286 4442 6423 3625 3864 4775 * 6510 15 46 5597 6545 2138 372 0 * 8978 1753 1702 P 16 3674 * 3418 2899 5648 6703 6677 4370 3678 4697 4589 5400 2222 3935 5046 4978 5560 4283 * 6633 16 42 5140 * 1748 510 * 0 8971 2270 1000 G 17 4860 * 2458 2106 5635 4698 5108 4711 4304 4352 * 4197 3963 6504 5032 2951 5202 6756 * * 17 0 * * * * * 0 8978 0 1000 R 18 3634 * 4278 * 6506 * 4888 4917 2794 2988 5024 6921 6638 4578 1763 5343 4121 5896 5943 5713 18 40 5184 * 1426 671 0 * 8978 2367 1000 L 19 6600 * 3591 2441 6579 6829 5040 5226 3315 3305 6503 4325 6761 3513 3889 3273 3502 5889 * 6561 19 0 * * * * * * 8987 0 0 Q 20 3754 6691 4578 2286 6833 5954 4165 4056 2771 5570 * 4684 5757 3857 4458 4753 5142 3554 * 4699 20 46 5001 * 1225 806 * * 8987 2419 0 L 21 * * * 6171 4603 * * 2199 * 1127 3379 * * 6636 6420 * * 3157 4672 * 21 15 * 6579 * * * * 8987 0 0 H 22 3895 * 6522 3296 * 6750 4261 4385 2024 * 4675 6419 * 4902 2508 4781 4681 3852 5008 5100 22 0 * * * * * 0 8971 0 1000 E 23 4035 5674 4101 3559 6469 4483 * 5512 2242 * * 3388 * 3009 2672 4498 4879 6639 6407 6601 23 48 5578 6419 1000 1000 0 * 8971 1070 1000 M 24 5852 * 4747 4602 6499 6207 6697 3392 4359 1307 3017 6432 * 6038 5733 * 4140 4251 5547 5503 24 0 * * * * * 0 8976 0 1000 I 25 3559 4721 * * 4934 * * 1326 * 2507 5831 * * * * * 5236 2148 * * 25 0 * * * * 0 * 8976 0 1000 V 26 4378 6317 * 2477 5057 6449 5995 3486 3404 3250 6829 4076 * 3827 5284 4995 3196 3198 * * 26 0 * * * * * * 8987 0 0 L 27 2590 * 5019 3403 * 6488 * 5362 3280 3130 4183 5110 * 2961 3826 3318 4416 5925 * 6735 27 0 * * * * * * 8987 0 0 H 28 5168 3850 * * 3914 3532 2845 6414 * 2651 3585 2488 * 5035 6438 5596 5017 * 6420 3774 28 0 * * * * * * 8987 0 0 G 29 * * 5007 * * 161 * * 5006 * * * * * * 5617 5429 * * * 29 0 * * * * * * 8987 0 0 G 30 1851 * * * * 494 * * * * * * * * * 6312 * * * * 30 74 4933 5867 3750 111 * * 8987 2431 0 K 31 6383 6811 5725 4208 * 6414 4877 4306 1938 6634 5587 4426 * 3276 3191 5358 2413 4743 * 6751 31 30 5605 * 2335 319 * 0 8983 1748 1667 F 32 4043 3524 * 6546 2542 * * 3524 * 4563 * * 6413 * 4271 * 5614 2054 5375 2382 32 49 5304 6976 3222 164 0 * 8983 1705 1667 L 33 5222 4385 6727 4294 5579 * 3898 4304 5628 3377 5609 * 6650 4171 3985 2702 2654 2867 * 6506 33 39 * 5233 * * * 0 8988 0 1000 H 34 4704 5794 3216 3844 5366 4675 3903 6245 3656 6365 4605 4281 3760 3196 3634 3546 3478 * * * 34 92 4536 5722 1189 833 760 1288 8972 2989 2580 Y 35 4040 6413 2768 4586 4036 * 4944 5097 3783 5023 6525 3199 6427 4398 5478 2940 4366 6479 6760 3152 35 31 * 5572 * * 928 1076 8967 0 2418 L 36 4253 * 4857 6898 2714 6963 * 3974 4877 2395 3776 5096 3299 * 6274 4496 6414 3619 4430 4161 36 33 * 5480 * * 417 1994 8944 0 2844 S 37 4821 5648 3171 3658 6765 4278 6372 * 5119 4633 4604 3178 4530 5075 5134 2533 3171 5000 * 4493 37 127 5445 4024 1341 725 1507 625 8941 1779 2380 S 38 3813 6393 3573 3944 6875 5925 4185 4143 2743 4513 5407 4529 3538 4901 3864 3342 4711 5446 6468 6362 38 28 6615 6833 1000 1000 2017 410 8869 1000 4291 K 39 3676 * 2997 5715 * 4065 6575 6078 2246 4935 5768 3398 6154 4584 4075 3517 3628 5536 5492 6865 39 76 6614 4602 0 * 216 2847 8875 1000 3994 K 40 4655 3804 4445 3646 * 4105 6416 4299 3867 4567 * 4023 3766 * 4533 3939 2343 3764 * 5842 40 29 5662 * 2909 206 1129 882 8945 1771 2900 T 41 4618 5758 4276 5226 5586 4948 4201 4095 4927 4000 * 3737 6200 4686 5683 3049 2081 3736 * 5523 41 41 5167 * 2705 240 0 * 8977 2298 1852 V 42 3771 3416 5041 6582 6631 6593 2426 3283 6439 4190 6759 6974 6769 7301 * 4675 2618 2524 * 6940 42 44 6396 5774 1000 1000 * * 9116 1000 0 T 43 6208 6679 4235 5723 5857 6455 3159 3063 6600 2848 * 5733 * 5309 * 4114 2233 2820 * 4678 43 0 * * * * * 0 8994 0 1766 H 44 5134 5601 * * 5626 6720 2310 2109 5039 3100 6821 * 5526 * * 6164 4286 2511 6418 4113 44 13 6806 * 1585 585 0 * 8994 1000 1766 I 45 3745 3836 6403 5079 * 6456 * 2359 5747 2681 5233 6439 * 6209 6887 4696 4053 1867 * * 45 67 4468 * 1931 439 * * 9116 3282 0 V 46 2897 6450 3980 5560 6797 4108 5142 2074 4375 3684 6808 5134 5663 5175 6822 4659 5774 3016 * 4801 46 42 5112 * 1430 669 * * 9116 2412 0 A 47 2704 3028 3880 4470 4863 5168 * 4875 3483 5585 * 3883 5064 6859 5904 2987 3823 3958 * 5624 47 13 6769 * 0 * * * 9116 1000 0 S 48 3996 * 3857 3594 5111 3344 5735 5011 3030 4692 * 4143 3311 5328 4583 3186 4507 5667 6982 4582 48 49 4910 * 1671 544 * * 9116 2409 0 N 49 5644 6403 3386 3342 4954 4653 5635 5688 4491 6044 5846 2867 5189 4040 4351 3221 3352 3829 6621 5300 49 40 5209 * 2318 323 * * 9116 2312 0 L 50 3282 6514 4628 5099 4433 3854 * 4911 4395 2938 6697 4724 2753 6533 5603 4353 2964 3710 * 6769 50 16 6536 * 1000 1000 * * 9116 1000 0 P 51 3945 6396 4150 3342 * 3273 5819 * 3418 4701 6597 4330 3177 5164 4118 3469 3001 6631 5490 6458 51 29 6597 6739 0 * * * 9116 1000 0 L 52 4007 6684 3643 3207 * 4402 5035 4294 3100 4130 * 4280 3726 * 4638 3827 3624 3792 * 4436 52 33 5474 * 2319 323 * 0 8975 2345 1000 K 53 4099 6639 4466 3759 4818 4176 5576 5474 3036 4649 5133 4803 4320 3739 4021 4008 4086 4015 * 3595 53 43 5080 * 1795 490 * 0 8975 2255 1000 K 54 6901 * 5089 3295 6404 5028 4385 6722 2093 4484 5040 3683 5364 4617 3253 3936 4743 4718 5674 4541 54 42 5115 * 455 1885 * 0 8975 2547 1000 R 55 2777 * * 4862 3627 6393 6425 3516 3314 4270 4999 3798 * 4299 4315 4421 4158 4717 6683 3050 55 44 5756 6464 1207 819 * 0 8975 2050 1000 I 56 3265 5788 5610 3259 5781 5531 5590 2973 3640 4023 * 4454 * 3740 2826 4862 4105 4278 * 5824 56 91 4036 * 2303 327 * 0 8949 3899 1724 E 57 3870 5599 5787 3267 5839 6390 4772 3635 2300 3338 6115 4077 6209 4164 4726 4590 4035 5108 * 5146 57 60 4614 * 3098 179 * 0 8949 2502 1724 F 58 2211 6112 4226 5705 4985 5217 4950 4373 3479 3429 6404 5616 6693 5498 5190 3919 4265 4072 3773 4914 58 173 3144 * 1759 505 1059 943 8949 5011 1724 A 59 3493 5859 4267 6711 5655 4294 4721 * 1919 4445 6786 3898 6500 5184 2658 4543 4087 6534 5672 6942 59 140 3434 * 1959 429 0 * 9088 4800 1000 N 60 4644 * 4390 4874 * 2172 4010 6789 2564 * 6512 2504 5810 5060 3766 3906 5104 6396 * * 60 115 4163 5586 1508 625 * * 9116 3744 0 Y 61 6648 4977 * 4706 * 4354 5071 1878 3229 2479 5537 6402 6633 * 5264 5699 5604 3416 4788 4509 61 79 4505 6733 1289 760 966 1035 9084 3465 1735 K 62 6507 * 3590 4507 * 6869 3137 3724 2516 6534 6397 4517 2456 4593 3749 6499 4851 5609 5073 5110 62 99 3916 * 2069 393 965 1036 9101 3916 1761 V 63 4887 3763 * * 4349 * * 1442 * 3748 * * * * * * 5362 1486 * 5669 63 56 4708 * 815 1212 0 * 9108 2711 1000 V 64 5047 * * * * * * 3177 * 3390 * * * * * * 5456 433 * * 64 0 * * * * * * 9116 0 0 S 65 6529 6621 5108 * 6388 4708 3563 6759 2540 5458 * 4410 6164 4001 3572 2339 2488 6941 6830 6520 65 0 * * * * * * 9116 0 0 P 66 3962 5724 * 4351 5192 6993 5158 3898 4866 4039 * 4868 1560 5085 * 3574 4669 3627 * 4821 66 0 * * * * * * 9116 0 0 D 67 4314 * 2710 2428 6403 4429 4501 6940 3140 5677 * 4289 * 2776 4176 3914 4361 * * * 67 0 * * * * * * 9116 0 0 W 68 * * * * 3610 * * * * * * * * * * * * * 240 3804 68 0 * * * * * * 9116 0 0 I 69 6388 * * * 3557 * * 1489 * 1495 * * * * * * * 2380 * * 69 0 * * * * * * 9116 0 0 V 70 5719 * 4236 3220 2586 * 6736 4297 5112 2655 5345 5128 * * 3796 5151 3703 4220 3908 4166 70 0 * * * * * * 9116 0 0 D 71 3757 * 964 2274 * * 7666 * 4620 5565 5646 5923 * 5069 5616 4866 5729 * * * 71 0 * * * * * * 9116 0 0 S 72 5611 850 * * * * * * * * * * * * * 1235 * * * * 72 0 * * * * * * 9095 0 0 V 73 4282 4354 5639 5670 3925 6821 5474 2063 5626 2600 6504 6647 * 6452 * 6784 5041 2106 5727 6041 73 0 * * * * * * 9095 0 0 K 74 3407 * 4600 3502 5626 6452 * * 2131 5000 * 3599 * 4054 2405 3582 4405 5456 * * 74 0 * * * * * * 9095 0 0 E 75 2663 5648 * 3219 * * 5622 * 3507 3500 4404 4637 * 2762 3645 2895 5110 6503 * 5117 75 30 5594 * 1585 585 * * 9065 1109 0 A 76 5854 * 6301 6645 * 1395 6590 * 2828 5178 5154 3029 * 4168 4095 4087 * * 4083 5761 76 20 6180 * 0 * * * 9065 1000 0 R 77 4549 5722 6508 4206 6965 6876 5584 * 1532 6573 4794 6702 * 3414 2632 4666 3540 4785 * 5875 77 0 * * * * * * 9065 0 0 L 78 4172 4338 * 5688 4683 * 6401 3269 3519 1745 4551 6180 5325 5390 3243 * * 3135 6508 * 78 0 * * * * * * 9065 0 0 L 79 4152 * * 6481 * * * 3706 * 939 4124 * * 3479 5784 * * 2563 * * 79 30 5594 * 1585 585 * * 9065 1109 0 P 80 5003 * 1826 6475 * 6787 6137 * * * * 2804 1400 4884 * 3377 * * * * 80 0 * * * * * * 9065 0 0 W 81 4603 6483 6751 1807 3572 * 4606 3090 6536 5220 6646 * 4794 6593 5904 7064 4065 3620 4160 3400 81 0 * * * * * * 8732 0 0 Q 82 5037 * 2827 2367 * 4242 5713 * 2851 6266 5661 5230 6516 3926 4112 3032 3538 6402 * 6630 82 0 * * * * * * 8732 0 0 N 83 4622 * 2821 3400 5491 4497 * * 2961 3906 * 3282 2505 4233 3870 4685 5506 * * * 83 16 6504 * 0 * * * 8732 1000 0 Y 84 * * * * 2217 * 6455 * * * * * * * * * * * * 370 84 0 * * * * * * 8654 0 0 S 85 3343 * * 4300 5081 * * 5303 4382 1825 4123 * * 3524 2877 3086 4622 5222 * * 85 0 * * * * * * 8469 0 0 L 86 * * * * * * * 1708 * 938 3681 * * * * * * 3412 * * 86 0 * * * * * * 7991 0 0 T 87 2711 * * * * * * * * * * 1997 * * * 1650 1846 * * * 87 0 * * 0 * * * 6206 0 0 //