HHsearch 1.5 NAME c4i86A_ FAM FILE c4i86A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4i86A_.a3m DATE Sat Apr 6 08:23:11 2013 LENG 102 match states, 102 columns in multiple alignment FILT 109 out of 316 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.7 EVD 0.4254 -1.1756 SEQ >ss_dssp CCCCCCCEECCCEEEEEETTSSCEEEEEEEEECSSEEEEECCCSSCCCSCEEEEEEEEETTEEEEEEEEEEEECSSCEEEEECCCSHHHHHHHHHHHHHH HC >sa_dssp EEDEDDECECEBEBDACBEEDECECECDBCCABBDBBBAEBDBEDECECECDBEBDBDBEEDDADACADADDCDECDACBDBCCEDEECCEBBCDAADCC DE >ss_pred CCCEEEEEEEEEEEEEEECCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEEEEEEECCEEEEEEEECCHHHHHHHHHHHHCC CC >ss_conf 9630123778977999957995799999963037706999368875899828999983798469999999993199799999738999998888743124 79 >Consensus QrRxxxRvxxxxpvxixxxdgxxxxxgxtxDiSxgGxxixxxxxxxxxxxxxvxixlxxxxxxxxxxaxVvrxxxxxxxlxfxxxxxxxxxxlvrxxfxx ex >c4i86A_ QKRNSHRIPATIPVEVANADGSIIVTGVTEDLSMGGAAVKMSWPAKLSGPTPVYIRTVLDGEELILPARIIRAGNGRGIFIWTIDNLQQEFSVIRLVFGL EH >UniRef50_B2IZC1(594-690:726) Glycosyl transferase, family 2 n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IZC1_NOSP7 E=7e-05 s/c=0.50 id=19% cov=92% -RRTMDRFPLKTTCKITAKD--QVFLGYTQNLSESGARVVLITSDVALNTSIVEVTFVEYG--FSIQAEIVRffvkKDKFGIALQFIQLETEQQRKLVEV LY---- >UniRef50_A5L0Z7(99-200:274) Cellulose synthase catalytic subunit n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L0Z7_9GAMM E=7e-16 s/c=0.83 id=20% cov=96% QVRKDHRVEVSMPIWVRLHTGH-LIQAEMKDFSLGGIRVVIDDaddkTCEYLLGQCLDVVLKRGGQEFVFPMTVAYASKGIFGLRLEELSHQQQVQYVQC TF---- >UniRef50_C9AU97(507-605:746) Glycosyltransferase n=3 Tax=Enterococcus casseliflavus RepID=C9AU97_ENTCA E=5e-05 s/c=0.49 id=20% cov=73% --RTTERFRAHYPVEV--SDQDASYSLMTENISENGLSFVSDVPLYFPPDAQLTFKITRNDYQAEMTGNVVRVFSGK----------------------- -- >UniRef50_C1DW58(576-678:764) Cellulose synthase catalytic subunit (UDP-forming) n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DW58_SULAA E=3e-07 s/c=0.55 id=19% cov=95% QRRKAFRIPSNDEAFVFTEN--HTFSGRVRDISLTGIWIETDQDITeylklIRDNHIKVMIKDLDNIAFYLDAKVVNANSKNIRAQFLKTNeLVNIAKLV KVVY---- >UniRef50_B0TBX8(98-210:219) Type iv pilus assembly protein pilz n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TBX8_HELMI E=5e-05 s/c=0.43 id=20% cov=65% QRRNFYRFPITVATQYCKQEKDVDpkdwtwYKGVIRNFSGGGVCLTVKEQLHVGDKIMVDLPLGKDQLRVG----------------------------- -------- >UniRef50_A6B552(3-99:122) Type IV pilus assembly protein PilZ n=8 Tax=Vibrio RepID=A6B552_VIBPA E=1e-07 s/c=0.60 id=18% cov=94% EKRRFSRIIYQAPAQL--EQRDLRLNATIQDLSLHGLLLQAEGLDTLNPALLVDvgFSFHQSEQEITLTAQIVDVTQDQIRLKITNIGIESISQLKRFI- ---- >UniRef50_Q21YK3(10-104:125) Putative uncharacterized protein n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21YK3_RHOFD E=1e-06 s/c=0.57 id=21% cov=47% ------------------------------DIALKGALVQtaTAQPLVLQEKCRLVLPLTDGGEAIEMAGKIVHLEDQR--------------------- ---- >UniRef50_Q098R7(14-115:121) Type IV pilus assembly protein PilZ n=2 Tax=Cystobacterineae RepID=Q098R7_STIAU E=3e-06 s/c=0.52 id=19% cov=97% ERRESPRVPMRFLV--RRAGSEAGFEAYEGDLSLGGCALRG-GSLEGGAQVELRLLLPSAPDELRVNGEVLQVTRGEpgvaVRVRFVNLSVEEELAIARH LDDLE- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * Q 1 * * * 1419 * * * * * * * * * 676 * * * * * * 1 0 * * * * * * 7419 0 0 K 2 * * * 5770 * * * 3824 3031 4747 * 4424 * 4570 949 5949 * 2959 * * 2 0 * * * * * * 7734 0 0 R 3 * * * * * * * * * * * * * * 0 * * * * * 3 0 * * * * * * 8122 0 0 N 4 3778 6211 5426 3463 5147 * 6303 * 3016 * 6577 2566 * 3684 2081 3634 4032 * * * 4 0 * * * * * * 8125 0 0 S 5 3663 6089 4283 4113 1584 6773 3113 * 6303 6128 6456 6301 * 5278 5525 3502 3800 6637 * 3830 5 0 * * * * * * 8125 0 0 H 6 3585 6548 5043 3730 4338 * 2662 5508 * 5747 6264 7167 2337 5445 6089 4304 4916 2588 * 4421 6 0 * * * * * * 8125 0 0 R 7 * * * * * * * * 5775 * * * * * 27 * * * * * 7 0 * * * * * * 8124 0 0 I 8 5283 * * * 3307 * 4548 2079 6409 3550 4069 * * * * * 4803 1562 * 3999 8 11 * 7100 * * * * 8124 0 0 P 9 3373 * 3972 3304 * 6414 6309 5343 3685 * 6295 4970 1498 5485 3536 4189 5295 * 6343 6387 9 13 6820 * 0 * * 0 8131 1000 1000 A 10 2917 5328 * * 3351 5505 6309 3164 5504 2881 3354 * 6587 6387 * 4019 5672 2315 * 4713 10 0 * * * * 0 * 8131 0 1000 T 11 6158 5402 2956 3202 * 5557 4802 4915 3861 6418 5503 3399 6658 5461 2691 3644 3202 4360 * 6341 11 13 * 6855 * * * * 8124 0 0 I 12 2962 * 4901 * 4231 4890 * 2969 * 2068 4174 5393 * * 5654 5402 3222 2936 * 5360 12 44 6556 5704 1585 585 * 0 8123 1000 1000 P 13 4127 * 4093 2919 * 4367 * * 5114 5477 5633 4738 1106 4345 6314 6344 4158 * * * 13 0 * * * * 546 1666 8122 0 2177 V 14 2614 4417 * * 5298 4926 * 2504 * 3854 * * * * * 6328 5434 1150 * * 14 33 6438 6488 1585 585 0 * 8132 1000 1000 E 15 3425 * 6242 2653 6214 6273 * 4740 3247 4381 6643 3916 * 4426 3354 4292 3030 3540 5322 6331 15 31 6157 7137 2000 415 * 0 8120 1000 1000 V 16 5396 4930 * * 4574 * * 2281 * 1742 6242 * 6127 * * * * 1954 * 3170 16 124 5616 4017 2440 294 0 * 8140 1728 1693 A 17 3897 5115 6431 6474 6098 5985 4209 6360 3168 3579 6579 4661 * 4293 3107 3377 2762 3969 * 3940 17 44 6540 5709 0 * 2190 357 8037 1000 3308 N 18 2721 4960 5165 4639 3209 4923 5532 4232 4218 2717 * 5648 6507 6698 4245 4630 3958 3612 * 4423 18 87 6481 4394 3459 138 581 1592 8057 1000 3610 A 19 2705 * 3674 3219 6496 4735 5551 4823 4090 3383 * 4497 2897 3818 5570 4080 4844 5374 6319 * 19 80 6392 4563 2000 415 1546 605 8076 1000 3344 D 20 4205 * 1374 3751 * 2449 5766 * * 6422 * 3189 5206 4657 4438 5147 5514 * * * 20 199 7011 3046 0 * 850 1168 8068 1000 3695 G 21 5658 * 3399 3707 * 1156 6084 * 4279 5436 5206 6372 * 3386 6157 3911 5170 6020 * 6350 21 104 5172 4585 1000 1000 1934 438 7999 1606 5162 S 22 4146 * 2642 2384 4803 3317 3697 6367 5444 * * 4470 6318 3845 3258 3820 5148 6315 * * 22 184 3824 4352 1864 463 242 2695 7990 2995 5039 I 23 3852 * 4472 2775 6310 * 4025 4243 4429 3697 6122 * * 3093 3328 3321 3884 3688 * 6297 23 122 * 3627 * * 953 1048 7962 0 3745 I 24 4504 * 5455 4334 3192 4822 6250 3027 3620 3754 * 6708 4337 4237 4543 4624 3303 3362 * 4227 24 161 5367 3615 2082 389 501 1769 8039 1542 4546 V 25 4830 6245 * * 3024 * 3469 3421 5217 2768 4588 * 6583 * * 3746 4760 3199 4090 2833 25 78 6254 4654 2322 322 149 3348 7920 1000 4332 T 26 4045 6126 3437 3467 6398 6976 5420 * 4041 3977 7214 5158 5057 3070 3223 3054 3793 3838 6723 6385 26 49 6204 5664 0 * 1282 764 8117 1000 2951 G 27 2758 2969 4873 * 6177 1066 * * 6267 4417 * * * * 5549 5365 5559 4549 6033 6129 27 0 * * * * 288 2468 8018 0 2954 V 28 4598 5478 6506 3259 5720 7036 4544 4400 4370 4505 5589 * * 4376 3033 3846 3297 3007 6448 3141 28 0 * * * * 0 * 8255 0 1000 T 29 4126 3740 * 6516 * 6433 * 3280 * 3331 4642 * * * * 3140 1456 3001 * * 29 18 * 6305 * * * * 8403 0 0 E 30 5740 * 6318 2772 6437 6530 4411 4006 3461 3123 6638 * * 3859 2503 4001 4724 2949 * * 30 0 * * * * 0 * 8504 0 1000 D 31 * * 350 5847 * * * * * * * 2474 * * * 5807 * * * * 31 0 * * * * * * 8082 0 0 L 32 * * * * 3755 * * 1405 * 1602 4205 * * * * * * 3016 * 4605 32 0 * * * * * * 8082 0 0 S 33 5456 6084 * * * 4561 * * * * * * * * * 120 * * * * 33 0 * * * * * * 8082 0 0 M 34 2571 * 5188 3097 6538 3051 * 4729 5193 1806 4593 6116 * 5626 6747 4948 5640 4514 6063 6899 34 0 * * * * * * 8082 0 0 G 35 4630 * 6097 5564 * 970 5471 * 4011 * * 3656 * * 4523 3201 3552 6362 * * 35 0 * * * * * * 8082 0 0 G 36 * * * * * 0 * * * * * * * * * * * * * * 36 0 * * * * * * 8082 0 0 A 37 2377 4260 * * 6257 6116 * 3225 * 1943 2523 * * * * * 6364 2517 * * 37 10 * 7212 * * * * 8082 0 0 A 38 2348 4558 * * 2768 3178 * * 4078 2528 6112 5789 * 5954 3084 3447 * * 6279 * 38 31 6369 6775 1000 1000 * 0 8082 1000 1000 V 39 5018 5613 * * 3367 * * 2063 * 1607 5589 * * * * * * 1998 * 6245 39 31 6700 6456 1585 585 1124 886 8080 1000 1619 K 40 4242 * 4581 3703 6448 * 3525 3666 2989 4778 5499 4360 6525 3159 3073 3939 5162 3583 * * 40 15 6628 * 1000 1000 1000 1000 8067 1000 1707 M 41 4067 4880 * * 6742 4009 * 4737 * 1985 5223 * * * 6562 4408 1624 2996 6552 * 41 39 6032 6451 999 1001 0 * 8068 1777 1000 S 42 3551 6463 3055 3510 * 6083 5587 5878 2963 5072 * 5248 2745 5169 3895 3552 3552 4516 * * 42 39 5792 6821 0 * 0 * 8075 1732 1000 W 43 3786 * 3822 2688 6271 3772 5676 * 3156 4913 * 4985 5718 3344 3270 4571 3252 5026 6758 6529 43 44 6550 5666 2000 415 * 0 8073 1000 1000 P 44 3939 5378 3637 3284 * 3529 5839 * 3419 5108 6767 4947 1741 5121 6515 3683 5406 * 6658 6749 44 65 5052 6138 1493 633 1640 558 8041 2226 2181 A 45 3337 5656 4976 6939 5073 5521 4305 3474 * 1883 4895 5419 4675 5274 4964 5383 5385 3351 5172 4310 45 44 5057 * 740 1317 974 1027 8058 2250 2824 K 46 4681 * 3843 2030 5485 6587 5744 6451 4165 5589 4920 5890 2482 3758 4819 3888 3815 5627 * 6648 46 62 4789 7336 1536 610 0 * 8090 2230 1710 L 47 5403 6537 6509 * 4518 4463 * 2875 5964 1708 5058 6060 3588 5212 6751 7165 6925 2232 * 6087 47 23 6733 7280 1000 1000 * 0 8090 1000 1000 S 48 4707 6845 3568 4187 6419 1721 6887 * 4447 4496 * 3910 3069 4707 4110 3563 5776 6024 * * 48 12 6966 * 1585 585 1015 985 8318 1000 1679 G 49 3514 6861 3162 2500 * 5702 * 5847 4379 3996 6934 4930 3631 3641 6482 4814 2906 3709 * 6710 49 13 * 6830 * * 0 * 8308 0 1000 P 50 4847 6938 3556 4011 * 1877 6100 6241 3526 * * 3624 4527 4056 2715 4488 5948 5292 * * 50 14 6649 * 2000 415 0 * 8296 1000 1000 T 51 3570 4378 3563 3906 6387 * 5479 3388 6592 2871 6395 * * 3645 6395 3468 4139 2407 * * 51 0 * * * * * * 8302 0 0 P 52 5957 5723 3482 3154 6403 7005 4759 3711 3630 3609 5040 * 3642 4765 2964 4291 4378 3928 5202 * 52 0 * * * * * * 8306 0 0 V 53 5685 4197 * 5772 3857 4897 * 2433 6308 2310 * * * * 6528 6593 5583 1459 * * 53 0 * * * * * * 8306 0 0 Y 54 4014 * 3831 2741 6309 * 5585 6285 4438 4614 5759 5428 * 3751 2859 4236 2587 3544 * 5262 54 38 5887 6800 2349 315 * * 8306 1709 0 I 55 5325 * 5838 * 2878 5698 * 2191 * 1744 4421 * * 6394 * 5350 * 2310 * * 55 36 6916 5959 1000 1000 * 0 8314 1000 1000 R 56 5000 6860 4825 4032 4839 5432 4466 4196 5301 3663 * 4007 5641 5134 3750 2958 2779 3482 5103 5415 56 14 6737 * 1000 1000 480 1822 8280 1000 2178 T 57 6786 * 5638 4947 3461 * * 2463 5459 1500 4086 5257 6103 * * 4373 4935 3192 * * 57 36 5897 6935 513 1742 * 0 8276 1740 1000 V 58 3081 * 3768 4518 3739 6484 4135 * 4190 6213 * * 1966 * 3993 3661 4627 3441 6116 6840 58 101 4762 5028 1853 467 850 1167 8391 2784 1527 L 59 5288 6376 3093 4373 5018 3212 5142 4792 4097 2020 5987 4751 5164 5112 3418 4971 * 4553 * 6498 59 76 4284 * 1573 591 888 1122 8017 3099 2656 D 60 5064 * 2530 3274 6015 3020 7414 * 4883 3636 6419 3403 5140 5154 3920 2945 4686 5827 * 5673 60 74 4533 7137 2142 371 1054 948 8066 2774 1546 G 61 5587 * 3726 3835 6288 1688 6297 4245 5529 5922 * 2615 5048 3387 6686 4266 4473 6495 * * 61 31 6625 6449 1000 1000 * 0 8060 1000 1613 E 62 3985 * 5565 2932 6504 5152 4126 3904 3490 3878 5552 5686 4393 2827 3240 4287 5444 5421 * 4973 62 53 5173 6960 1281 765 1669 545 7966 2219 2107 E 63 3306 * 3566 2656 * 5641 5871 6594 4867 4184 * 4307 2831 5265 4037 3854 3345 4223 * 5645 63 24 5900 * 1764 503 532 1696 7973 1561 2197 L 64 3862 * * 5562 2680 * 5360 2281 * 2137 3892 * 6612 6434 * * * 3015 * 3581 64 30 5598 * 1756 506 * 0 7982 1670 1000 I 65 2714 * 4275 3690 * 5751 3770 4510 3856 4480 5075 4337 5647 5052 3516 2662 4633 5567 * 4930 65 14 6707 * 2000 415 0 * 7983 1000 1000 L 66 3617 5119 * * 2618 * * 3035 * 1914 4008 * * 5341 * 6081 6505 2139 * * 66 19 * 6285 * * * * 7969 0 0 P 67 4983 * 3737 3105 * * 5498 * 2783 6419 6417 4876 1781 4815 4620 6457 2842 4863 * * 67 0 * * * * 0 * 7941 0 1000 A 68 1044 3636 * * * 2683 * 4652 * * 4424 * 6629 * * 5251 3850 3864 * 5788 68 13 6760 * 1585 585 * * 7969 1000 0 R 69 4508 * 6593 2873 * * 5674 * 2272 * * 4521 * 4151 1761 5158 3874 3681 * 6209 69 16 6548 * 1000 1000 * * 7969 1000 0 I 70 6271 * * 6396 * * * 1860 * 4069 6267 * 6417 * * * * 743 5811 * 70 20 6162 * 1000 1000 * * 7969 1000 0 I 71 3225 5824 * 6532 6506 * * 2703 6176 3560 4581 * * * 4535 * 4740 1062 * * 71 0 * * * * * * 7811 0 0 R 72 6352 * 6411 5684 5249 4672 3578 * * * * 4176 * 5181 755 4296 * * 4178 5292 72 44 5046 * 1558 599 * * 7706 1721 0 A 73 2886 4464 5858 5847 * * 4951 3069 5164 6051 5146 5587 5844 * 6312 2422 4114 2108 * 4838 73 50 4875 * 1323 736 * * 7660 1641 0 G 74 * * 4111 3212 5096 3478 4952 6053 4339 6261 5095 5745 * 4494 2243 2553 3242 5276 * * 74 20 6155 * 3585 126 * * 7541 1000 0 N 75 6057 * 2081 3544 * 3262 * * 3372 * * 3324 4023 3208 3581 3457 5807 * * * 75 19 6276 * 1000 1000 * * 7495 1000 0 G 76 6022 * 3834 3230 4794 1454 5582 * 3388 * * 3297 * 4551 4102 4073 5143 * * * 76 88 4079 * 2995 193 * * 7436 2265 0 R 77 5902 * * 2873 * 2990 4624 4060 5558 5835 6371 5388 * 2925 2034 4769 4628 3834 * 5468 77 140 3434 * 2177 361 * * 7190 2708 0 G 78 4657 * * * 2970 5423 * 2789 * 1643 5019 5553 * * * * 5485 2724 5385 3398 78 0 * * * * * * 7209 0 0 I 79 2858 * * * * 1382 4458 4487 * * * * * * 2267 3132 5489 5720 * 5314 79 0 * * * * * * 7209 0 0 F 80 4302 5489 * * 2895 * * 3204 * 844 5263 * * * * * * 3309 * * 80 0 * * * * * * 7209 0 0 I 81 4957 * * 3797 * * 5689 5402 3199 5639 * 5467 * 2173 1652 3357 4679 5336 * * 81 32 5496 * 2000 415 * * 7191 1000 0 W 82 * 4363 * * 667 * * 5463 * 3197 * * * * * * 4342 4957 3206 * 82 0 * * * * * * 7191 0 0 T 83 3756 5316 * 2816 * * 4394 5459 4317 2953 5687 * 4049 4398 5282 4415 2169 3521 * * 83 0 * * * * * * 7139 0 0 I 84 4078 * 2816 3369 * 5254 4250 4361 5141 4418 * 3444 3079 3865 3954 3947 4570 5356 * 5341 84 0 * * * * * * 7151 0 0 D 85 5414 * 3796 3823 * * * 2408 * 1618 2939 * * * * 3806 3877 4325 * * 85 0 * * * * * * 7151 0 0 N 86 * * 1590 3979 * 4379 * * * * * 4251 * * 5254 2033 2099 * * * 86 42 5120 * 0 * * * 7151 1000 0 L 87 * * 3831 3762 * * 5340 2742 5736 1742 4351 * 3757 5363 4333 5353 3400 4380 * * 87 0 * * * * * * 7118 0 0 Q 88 4343 * 2162 1513 * 5197 * 5280 5349 * * * 5338 3272 4443 5308 4426 4225 * * 88 0 * * * * * * 7086 0 0 Q 89 4312 * 3028 3216 * * * * 4333 * * 4476 * 1488 5407 2583 5192 4305 * * 89 0 * * * * * * 7012 0 0 E 90 4046 * * 1453 5307 * 5348 3597 5252 5883 4950 * * 2404 2742 * * 5157 * * 90 0 * * * * * * 6940 0 0 F 91 2606 * * 3733 3782 5143 * 5348 3680 3540 * * * 3523 2448 2910 4568 5293 * * 91 0 * * * * * * 6940 0 0 S 92 2784 * 5321 2962 * 5150 2827 * 3160 * * 4328 * 2249 5516 4185 5286 5107 5114 * 92 0 * * * * * * 6890 0 0 V 93 5243 * * * 3716 * * 2199 * 885 * * * * 5183 * * 3566 * 5264 93 0 * * * * * * 6890 0 0 I 94 4124 * * * * * * 2395 3118 * 5242 * * 4403 3418 * 4999 1188 * * 94 0 * * * * * * 6893 0 0 R 95 4114 * 5037 4107 * * * * 4170 5117 * 5222 * 2843 894 5070 4813 * * * 95 0 * * * * * * 6852 0 0 L 96 5138 2822 * * 2578 * 5119 2805 * 1896 * * * * * 5091 5458 3168 5070 5109 96 0 * * * * * * 6852 0 0 V 97 * 3488 * * * * * 2563 * 2571 5016 * * * * * 2370 1519 * * 97 0 * * * * * * 6852 0 0 F 98 * * 4704 4584 668 * * * * * 3846 * * * * * * * * 2178 98 0 * * * * * * 6356 0 0 G 99 2880 * 2937 * * 730 * * 3901 * * * * * * 3975 * * * * 99 179 * 3100 * * * * 5262 0 0 L 100 * * * * * * * * 2789 225 * * * * * * * * * * 100 0 * * * * 0 * 3782 0 1000 E 101 * * * 0 * * * * * * * * * * * * * * * * 101 0 * * * * * * 3551 0 0 H 102 * * * * * * 0 * * * * * * * * * * * * * 102 0 * * 0 * * * 1653 0 0 //