HHsearch 1.5 NAME c4i7aD_ FAM FILE c4i7aD_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4i7aD_.a3m DATE Sat May 4 08:43:04 2013 LENG 87 match states, 87 columns in multiple alignment FILT 87 out of 91 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.5 EVD 0.4068 -1.3672 SEQ >ss_dssp CEEEEEEEEECCSSCCGGGTTCEEEEEEEECTTSCEEEEEEEEEESSCCCTTCEEEEEESGGGGGCCCCCSEEEEEECCCCCCCCCC >sa_dssp EBCADAECEDEDEEDDECCEECDBACABDBCEEDEEDEDECDABBDDEBDEDDCADABDDEEADEEECDBEAAADCDCEEDEEDEEE >ss_pred CEEEEEECCEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEEEEEECCC >ss_conf 976999552899987388787249999950677767772599996024889889999858000577887116999987338886179 >Consensus MxlakViGxvvaTxKxxxLxgxkLliVqplxxxxxxxgxxxVAvDxvGAGxGdxVlvxxGsxArxxxxPvDaxIvGIiDxxevxxxx >c4i7aD_ MYLGKVIGTVVSTSKNESLSGTKLLVVARLTEKLIPDGSTQVVVDTVGAGNGEIVIVSCGSSARQSHSVIDAAVVGIVDTVETVNHH >UniRef50_B1ZR94(1-84:88) Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZR94_OPITP E=3e-10 s/c=0.79 id=31% cov=92% MNYARIDGTIVASACHRSMGGTRTVICQPIDAEGRDEGAPILAVDPLGAGLHEVVILSTDGSAtrefvRDPKSPLRNLIIGIVD-------- >UniRef50_B5ERU6(1-80:88) Carboxysome peptide B n=10 Tax=Bacteria RepID=B5ERU6_ACIF5 E=5e-12 s/c=0.90 id=30% cov=89% MDIMRVVSDLVATRRIPGLQNASLRVLT------DAKGRISVAADPVGVPPGKWVIAVSGSAARYAagdyRILTDLTIAGIIDHWD----- >UniRef50_A1WFN9(1-79:94) Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=8 Tax=Bacteria RepID=A1WFN9_VEREI E=6e-12 s/c=0.91 id=34% cov=87% MIRARVNGKLWSTRHLDSLPVGALLEVE------TESGAKLIAFDPLGCAEGESVLVTQGSVAAayfpNRPVPIDALIIGSIDEV------ >UniRef50_C1ZH88(1-100:103) Putative uncharacterized protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZH88_PLALI E=3e-09 s/c=0.63 id=26% cov=97% MRLAEVIGRVTLSKCDPTVLGGTWIVAVPLLAEGlaavihrdttmtvRGREEAIIVYDELGASPGDIIAISEGAEASAPFhpdsKPLDAYNACLLDKIEL ---- >UniRef50_Q02C80(1-91:93) Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02C80_SOLUE E=2e-17 s/c=0.99 id=36% cov=98% MLIARVVGELVATQKHPSHEGRKLLLVQPLNLDGSDRGDAVVALDAVDAGVGDKVLLATEGfsamtSVGRPNSPIDMAVIGFIDHIELV--- >UniRef50_A0KHX1(1-81:85) Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=16 Tax=Gammaproteobacteria RepID=A0KHX1_AERHH E=2e-11 s/c=0.87 id=35% cov=93% MILAKVTGHVVATQKCDELRGSNLLLITQLDDQQQPMKDRSwVAVDSVGAGMHDVVLAEEYLALNRDRYKA-MSVVAIVEKV------ >UniRef50_Q6AIR1(8-96:102) Related to ethanolamine utilization protein (EutN) n=2 Tax=Desulfotalea psychrophila RepID=Q6AIR1_DESPS E=2e-14 s/c=0.90 id=36% cov=99% MELARVRGQVVATIRDPKVPHTSLLLVDFIRADGVVRREGHVAADTLGAGEGEYVLLVRGSGAALvvggGKPPIDLSVVAIVDQISALN-- >UniRef50_Q7UVK6(2-98:101) Similar to carbon dioxide concentrating mechanism protein CcmL n=1 Tax=Rhodopirellula baltica RepID=Q7UVK6_RHOBA E=5e-14 s/c=0.81 id=36% cov=97% MKIARVIGTVTLSRMHPSMKGYKLRCVEVVesadqiqvnqDDAKPIGGDTIVAWDLVGSRNGDWVALAEGpeSAApfRPEVKPTDASIVAILDHCEV--- - # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 4699 0 0 Y 2 * * 6322 4093 3653 * 5640 2533 4014 2743 * 4620 * 2721 2977 * * 5993 * 3180 2 0 * * * * * * 4699 0 0 L 3 * * * * 6004 * * 1649 6201 1317 4290 * 5555 * 5638 * 5458 3072 * 5937 3 0 * * * * * * 4699 0 0 G 4 941 4221 * * * 1680 * * * 5676 4460 * * * * 5735 * 5968 6207 * 4 0 * * * * * * 4699 0 0 K 5 * * * 4188 * * * 5284 1450 4734 * * * 3509 1635 * 3705 6381 * 5854 5 0 * * * * * * 4706 0 0 V 6 * * * * * * * 3366 * 4390 * * * * * * * 225 * * 6 0 * * * * * * 4706 0 0 I 7 * * 4760 5794 * * * 1728 5124 3566 6118 5662 * 5191 4585 * 3237 1640 * * 7 0 * * * * * * 4706 0 0 G 8 * * 3521 * * 343 * * 4869 * * 5712 * * 5804 4227 * * * * 8 0 * * * * * * 4706 0 0 T 9 5961 * 4504 4415 * * 3864 * 4370 * * 2695 5102 3937 3645 2312 2092 6462 * * 9 0 * * * * * * 4706 0 0 V 10 3127 6009 * * * * * 3339 * 2255 * * * * * * 5566 888 * * 10 0 * * * * * * 4706 0 0 V 11 * * * * * * * * * * * * * * 5566 * 2290 895 2079 * 11 0 * * * * * * 4706 0 0 S 12 1069 4306 * * 5487 * * * * 3383 * * * * * 1671 5804 5456 * * 12 0 * * * * * * 4706 0 0 T 13 * * * 6122 * * * * * * * * * * * 2865 237 * * * 13 0 * * * * * * 4707 0 0 S 14 4363 * * * 5600 * 4661 4282 3163 4737 * 6000 * 2892 1550 4730 4965 2952 * * 14 0 * * * * * * 4707 0 0 K 15 * 3679 * * * * 5665 * 555 5491 5911 * * * 2454 * * * * * 15 0 * * * * * * 4707 0 0 N 16 4324 4412 2245 3198 * * 2180 4276 * 4276 * 4738 * * * 3691 4446 3405 * 7989 16 0 * * * * * * 4707 0 0 E 17 3703 * 2491 2167 5807 * 5525 * 4803 * * * 1528 6471 4767 4737 6062 * * * 17 0 * * * * * * 4707 0 0 S 18 4191 * 4871 4680 6243 2339 6013 * 4441 5861 * 4064 * 4731 4889 1539 4057 5096 5807 * 18 0 * * * * * * 4707 0 0 L 19 * * * * 3831 * 5340 6441 * 578 2630 * * * * * * 4922 * 5102 19 0 * * * * * * 4703 0 0 S 20 3453 * 5523 4012 5741 4113 * 4417 2582 5005 * 2935 4485 3647 4098 5768 4786 3048 * 6122 20 0 * * * * * * 4703 0 0 G 21 * * * * * 520 3869 * * * 6558 4386 * 5862 6375 3264 5460 5672 * * 21 0 * * * * * * 4703 0 0 T 22 3002 5214 5471 6698 3711 3388 5776 5928 3399 3137 4904 * * 3446 4268 4868 4134 5209 4171 4318 22 27 * 5755 * * * * 4703 0 0 K 23 4900 * * * * * 5882 * 827 * * 4700 5223 * 3254 2738 3923 * * * 23 0 * * * * * 0 4673 0 1000 L 24 * * * * 3010 * * 4891 * 423 4778 * * * * * 5936 * 4516 * 24 0 * * * * * 0 4673 0 1000 L 25 6539 * * * 6744 * * 4756 * 933 2473 * * 5226 2924 * * 3636 * * 25 24 * 5919 * * * 0 4673 0 1000 V 26 * 5890 * 4894 5801 * * 2014 * 1823 3931 * * * * * 5401 1680 * * 26 0 * * * * * 0 4671 0 1831 V 27 3759 4744 * * * * * 3499 * 3546 5998 * * * * * 6432 540 * * 27 153 4637 4042 1290 759 * 0 4671 1722 1831 A 28 5068 * 4409 2172 * 6817 * * 4180 6678 * * 4912 1324 4060 5437 3875 4525 * * 28 225 5558 3020 471 1845 2758 231 4628 1497 2650 R 29 5207 * * 4873 4122 * * 3803 * 5007 4897 * 1013 3975 3072 6571 5269 5024 * * 29 99 4827 5014 1822 480 2339 318 4511 1567 2997 L 30 6115 5401 * 6550 * 6724 * 2516 * 1256 3661 * * 4654 * * 4863 2708 5547 5596 30 185 4087 4023 3107 178 * 0 4487 2145 3068 T 31 4480 * 1268 5553 * 3999 5341 * 4133 3959 * 3719 * 6479 4105 4335 3571 5008 * * 31 30 6532 6632 3000 193 3039 187 4456 1000 3416 E 32 2752 * 2638 3591 * 3953 * 4308 4528 4938 6067 6284 3572 4646 4467 4284 4828 3194 6277 6487 32 16 * 6516 * * 1367 707 4461 0 3395 K 33 3418 * 2754 2155 * 3283 5058 * 3194 4928 * 3335 4673 4074 5560 6587 5084 * * * 33 63 5747 5359 2000 415 1849 469 4500 1384 2893 L 34 4668 * 6555 2991 4828 1663 4630 5685 4172 4329 5736 * 6943 3546 5010 3897 5516 4938 * 4542 34 112 4170 5704 2829 219 707 1368 4587 2170 3040 I 35 6649 * 3405 3371 4985 3703 * 4757 3326 5436 * 3397 5881 3302 3451 3332 3363 5080 * * 35 55 4732 * 3985 94 1494 633 4678 1963 2326 P 36 4399 * 3451 3135 5294 4240 6730 5890 4142 6578 * 5263 1575 4351 3843 5547 5033 4533 * * 36 11 7063 * 2585 263 366 2158 4691 1000 1899 D 37 3251 * 2700 5219 * 3211 * 5179 3076 5159 5236 6240 5584 5778 3683 4340 2689 4012 * 6811 37 0 * * * * * 0 4701 0 1000 G 38 4096 * * 4899 * 618 * * 3547 6920 * * 6646 * 4028 3736 5919 * * * 38 0 * * * * * 0 4701 0 1000 S 39 3030 * 3006 2479 3937 4697 5373 * 4188 * * 3916 6747 4640 2839 3479 5000 6121 * * 39 13 * 6750 * * * 0 4701 0 1000 T 40 3704 6359 6383 3802 * 6388 * 3751 4199 3262 4956 6195 2505 4984 3293 4043 3338 4548 * 5349 40 38 5276 * 1707 528 897 1111 4698 1489 1336 Q 41 4384 * 5808 3562 2835 * 6412 2943 5461 2220 5623 6513 * 3343 6442 3994 * 3841 * 4143 41 98 3924 * 1803 487 0 * 4701 2190 1000 V 42 4847 * * * 6428 * * 2216 * 3420 * * * * * * * 633 * * 42 0 * * * * * * 4701 0 0 V 43 517 4839 * * * * * 5904 * * * * * * * 6273 6447 2150 * * 43 17 6428 * 0 * * * 4701 1000 0 V 44 2252 6778 * * 4926 6365 * 2994 * 3723 5754 * * * * * 5174 1360 4780 3999 44 11 7037 * 1000 1000 * * 4701 1000 0 D 45 * * 0 * * * * * * * * * * * * * * * * * 45 0 * * * * * * 4701 0 0 T 46 2927 5376 5657 4030 7022 6804 6224 4778 5492 4260 4799 5006 2514 * 3871 3150 2704 5531 * 5363 46 0 * * * * * * 4701 0 0 V 47 4637 * * * * * * 2138 * 2107 * * * * * * 5930 1047 * * 47 0 * * * * * * 4701 0 0 G 48 * 6626 5128 * * 163 * * * * * 6279 * 4735 * 5839 * * * * 48 24 5930 * 0 * * * 4701 1000 0 A 49 305 3504 * * * * * * * * * * * * * 4642 4783 5260 * * 49 0 * * * * * * 4701 0 0 G 50 5669 * * * * 372 5460 * 4034 * * 6458 4697 * 4739 4767 * * * * 50 0 * * * * * * 4701 0 0 N 51 6035 * 5754 2947 * * * 2203 3814 4377 5239 4559 2537 4692 5607 6717 5534 2568 * * 51 0 * * * * * * 4701 0 0 G 52 * * 5003 * * 190 3985 * * * * 6365 * * * * 5871 * * * 52 0 * * * * * * 4701 0 0 E 53 5607 * 1178 1231 * * * * 4697 * * 4874 * * * 4685 * * * * 53 21 6107 * 0 * * * 4701 1000 0 I 54 * * 6882 * * * 4880 3109 4022 2746 5657 6279 * 4189 2993 5669 4178 3358 2581 3672 54 0 * * * * * * 4701 0 0 V 55 * * * * * * * 3602 * * 6107 * * * * * * 147 * * 55 0 * * * * * * 4701 0 0 I 56 4116 * * * 3191 5714 * 2459 * 919 4126 * * * * * * * * 4446 56 0 * * * * * * 4701 0 0 V 57 4379 5628 * * 5121 * * 2395 * 2345 * * * * * * 3162 1582 6035 4180 57 31 5570 * 0 * * * 4701 1524 0 S 58 2525 4276 * 5239 * * * 3728 * * * * * * * 2343 1865 2314 * * 58 49 5862 5949 0 * * * 4701 1000 0 C 59 4544 5384 5231 2419 * 3480 * * 5924 5490 6436 * * 3717 2985 2344 2471 * * * 59 20 6183 * 0 * * 0 4689 1000 1000 G 60 * * 3267 4936 * 444 * * * * * 5745 * * * 3936 * * * 4487 60 24 5902 * 1000 1000 0 * 4689 1000 1000 S 61 3267 * * 4284 * 2857 * * 6035 5239 * 5200 * * 5286 872 4196 * * 6478 61 31 5565 * 2322 322 * * 4701 1450 0 S 62 1538 * 5949 2934 * 3411 5930 * * * * * 6673 6452 * 1954 4379 4071 * 6454 62 61 4595 * 2322 322 * * 4701 1578 0 A 63 420 * * * * 5949 * * * 4788 6454 * * * * 5546 3543 3612 * * 63 117 3678 * 1913 445 * * 4701 2491 0 R 64 4086 * * * * 4243 5428 * 5216 * 6273 5239 * 5613 635 4329 3768 6453 * * 64 229 2770 * 2068 393 * * 4701 3189 0 Q 65 4067 * 3255 4412 4306 * 3406 5690 4483 4706 4067 4739 4304 2776 3030 * 6452 5366 * 3484 65 445 1912 * 2012 411 * * 4701 3685 0 S 66 2320 * 2903 3635 * 4365 * * 4019 6673 5949 4416 2253 4458 5070 3564 5645 6279 * * 66 252 2643 * 2157 366 * * 4701 3185 0 H 67 3001 * 4105 3470 2804 5712 4271 * 3818 5930 * 3159 4377 4742 3173 4625 4060 5914 * * 67 138 3458 * 1910 446 * * 4701 2703 0 S 68 3442 5583 5104 4633 * 3779 * 3431 4116 5767 * * 6424 * 6392 2726 2440 2390 * 5239 68 216 2848 * 1931 439 * * 4701 3122 0 V 69 4068 * * * 6458 * * 6240 5239 4171 * * 438 * * * 4752 4090 * * 69 33 5472 * 964 1037 * * 4701 1768 0 I 70 3230 * * * * * * 1808 * 3507 * 6279 * * * 4604 2682 1690 * * 70 39 * 5239 * * * * 4701 0 0 D 71 * * 275 * * * * * 5926 * * 5830 * * 2840 * * * * * 71 0 * * * * 0 * 4655 0 1000 A 72 1051 5442 * * * * * * * 2389 3340 4769 * * 5428 4600 6035 * 3501 * 72 24 5949 * 2807 222 * * 4701 1000 0 A 73 2001 6392 * * * * * 4345 * 3822 5555 * * 5607 * 2724 2041 3298 * 3633 73 0 * * * * * * 4701 0 0 V 74 5657 5714 * * * * * 1061 * * * 5554 * * * 5492 5482 1266 * * 74 0 * * * * * * 4701 0 0 V 75 3462 5253 * * * 3825 * 1886 * 4976 4500 * * 5571 * * * 1168 * * 75 0 * * * * * * 4705 0 0 G 76 2525 4579 * * * 350 * * * * * * * * * * * * * * 76 0 * * * * * * 4705 0 0 I 77 * * * * 6440 * 6686 303 * 3552 * * * * * 5662 * 3980 * * 77 0 * * * * * * 4705 0 0 V 78 4782 4737 * * 5652 * * 1104 * 3292 * * * * * * * 1560 * * 78 0 * * * * * * 4705 0 0 D 79 * * 39 5236 * * * * * * * * * * * * * * * * 79 0 * * * * * * 4705 0 0 T 80 * * 3306 2295 * * 3283 * 3691 6029 * 4906 * 3538 5070 2396 2639 * * * 80 0 * * * * * * 4539 0 0 V 81 * 5252 * 6332 3347 * * 2552 * 3216 5811 * * * * * 4436 1376 3186 5270 81 0 * * * * * * 4351 0 0 E 82 * * 1605 1013 * * 4240 * * * * 5156 * 3901 * 5161 * * * * 82 0 * * * * * * 4077 0 0 T 83 4249 * * * * * * 4907 * 2839 4980 * * * * 3934 4734 645 * * 83 0 * * * * * * 3666 0 0 V 84 * * * * * * * * * 2999 1703 * * * * 2203 * 1512 * * 84 0 * * * * * * 2969 0 0 N 85 * * 1989 * * * * * * * * 419 * * * * * * * * 85 0 * * * * * * 2286 0 0 H 86 * * * * * 1602 1589 * * * * * * * * * * * * 1564 86 0 * * * * * * 1967 0 0 H 87 * * * * * * 595 * * * * * * 1564 * * * * * * 87 0 * * 0 * * * 1967 0 0 //