HHsearch 1.5 NAME c4htjA_ FAM FILE c4htjA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4htjA_.a3m DATE Thu Jan 10 12:17:17 2013 LENG 89 match states, 89 columns in multiple alignment FILT 12 out of 16 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.1 EVD 0.4255 0.7601 SEQ >ss_dssp CCEEEEESCTTCCHHHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEEEECCCTTCCCHHHHHHHHHHTHHHHHHHHTSCEEEEEECCCC >sa_dssp EDBCACADDEDADEDCADDAACBAADDCEBDDEBBCECDCEDDBABBCCDECEDEBDBDCACEBADECDEEACEECEBDBEECBCDEEE >ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC >ss_conf 94079861788898998999999999826861222567871651589972543798899999999985898765418077663034669 >Consensus xxgYivtxxxxlsxxxGxkLlxxlAexixlxxxsFxnisVxgxavTFrIrxNxxnlsasevxxkavxxKxxLekxtGlkIlqtgVGxkx >c4htjA_ ARGYIVTDRDPLRPEEGRRLVEDVARLLQVPSSAFADVEVLGPAVTFKVSANVQNVTTEDVEKATVDNKDKLEETSGLKILQTGVGSKS >UniRef50_B3DJH4(515-599:1024) Protein tyrosine phosphatase, receptor type, N polypeptide 2 n=4 Tax=Danio rerio RepID=B3DJH4_DANRE E=4e-10 s/c=0.78 id=37% cov=97% --GYIITE-DSLSTDQGLNLMEILAERVRLHVTDFLQLSVLGPAVTFRLRPNARNISTAQLARVAVEQKGQLEKESGLRILEAGLSDR- >UniRef50_B3DJG5(395-481:903) Ptprn protein n=6 Tax=Clupeocephala RepID=B3DJG5_DANRE E=1e-31 s/c=1.57 id=41% cov=99% --GYIVTNQSHLSLYDGVKLLETLAERIHLSTSSFINISVVGSALTFRIRQNALNLSAEDVANKAVAEKNFLEGETGLKIIQTGVGERS >UniRef50_B2GU79(488-574:996) LOC100158522 protein n=3 Tax=Xenopus RepID=B2GU79_XENTR E=6e-30 s/c=1.51 id=39% cov=99% --GYIVTNQKPLSLLSGAQLLETLAQRVHLSTASFINISVVGSALTFRIRQNNQNLSLTDVADRAVALKSDLETETGVKIIQTGVGQRN >UniRef50_UPI000175F9AB(385-479:916) PREDICTED: similar to islet cell autoantigen 512 n=1 Tax=Danio rerio RepID=UPI000175F9AB E=1e-28 s/c=1.34 id=42% cov=99% --GYIVTNQSPLNLSDGVHLLKTLAERIHLTTDSFINISVVGPAVTFRVLPNSQNLTASEISEKtavsisshAVAQKNLLETETGLKVLQAGVGEKS >UniRef50_UPI000186EC8F(466-551:979) conserved hypothetical protein n=1 Tax=Pediculus humanus corporis RepID=UPI000186EC8F E=3e-20 s/c=1.16 id=28% cov=98% ---YVILKNKVNTWQEGSRIVRKVEELLDLPQNTFTNIRVDQNSVKFKIDSNRLNLNASETIKKIDSMKDSIQRATGIEIVSTKVGNQN >UniRef50_C3ZPM0(501-583:996) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZPM0_BRAFL E=3e-19 s/c=1.16 id=29% cov=94% ---FLVFDRK-VTYDDGTKVRDALADIIGVPTEIFSDISVLDNHVSFLVRPNDKGLNASTVAHLAENNKEALQKAVGMELVGTGIGS-- >UniRef50_Q16849(472-557:979) Receptor-type tyrosine-protein phosphatase-like N n=31 Tax=Theria RepID=PTPRN_HUMAN E=8e-27 s/c=1.41 id=43% cov=98% --GYIVTDQKPLSLAAGVKLLEILAEHVHMSSGSFINISVVGPALTFRIRHNEQNLSLADVTQQAGLVKSELEAQTGLQILQTGVGQR- >UniRef50_UPI0001791CBB(502-585:1008) PREDICTED: similar to AGAP008127-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI0001791CBB E=3e-16 s/c=1.03 id=18% cov=85% ------------NPDRGEKLLKTLASIINVEFKSMVNARFEESEITFQILPSA-GINVTELVKKIETMKNKFAKKTGYTIDFVSIGDK- >UniRef50_UPI000179612A(386-666:1008) PREDICTED: protein tyrosine phosphatase, receptor type, N polypeptide 2, partial n=1 Tax=Equus caballus RepID=UPI000179612A E=1e-136 s/c=0.42 id=68% cov=99% --GYIVTETDPLSLEKGKELLAGVARLLEVPMSVFVDIDVVGPAVTFKVSANVLNVTTAEAVEAAVENKDNLEKTSGLKILQTGVGSKS # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 0 * * * * * * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 R 2 * * * * * * * * * * * * * * 0 * * * * * 2 0 * * * * * * 1000 0 0 G 3 * * * * * 0 * * * * * * * * * * * * * * 3 0 * * * * * * 2214 0 0 Y 4 * * * * 2757 * * * * * * * * * * * * * * 231 4 0 * * * * * * 2915 0 0 I 5 * * * * * * * 537 * 2757 * * * * * * * 2617 * * 5 0 * * * * * * 2915 0 0 V 6 * * * * 3676 * * 1823 * * * * * * * * * 646 * * 6 0 * * * * * * 2915 0 0 T 7 * * * * 2757 * * * * 2617 * * * * * * 537 * * * 7 0 * * * * * * 2915 0 0 D 8 * * 1604 2265 * * * * 2617 * * 1736 * * * * * * * * 8 184 * 3063 * * * * 2915 0 0 R 9 * * * * * * * * 3495 * * 2512 * 1498 1851 * 3255 * * * 9 0 * * * * 0 * 2732 0 1000 D 10 * * 1720 * * * * * 1073 * * * * * * 2178 * * * * 10 231 * 2757 * * * * 2915 0 0 P 11 * * * * * * 3748 * * * * * 772 * * 2858 * 2306 * * 11 0 * * * * 0 * 2655 0 1000 L 12 * * * * * * * * * 537 * 2617 * * * * * 2757 * * 12 0 * * * * * * 2915 0 0 R 13 * * * * * * * * * * * 2378 * * 3560 1139 1895 * * * 13 0 * * * * * * 3156 0 0 P 14 * * * * * * * * * 1269 * * 2246 * * * 3248 * 2814 2981 14 0 * * * * * * 3156 0 0 E 15 3701 * 1482 2617 * * * * * 3873 * * * 2814 * 3916 * * * 2995 15 0 * * * * * * 3156 0 0 E 16 3701 * 1651 2139 * * * * 3677 * * * * 3248 2988 3873 * * * * 16 0 * * * * * * 3156 0 0 G 17 * * * * * 0 * * * * * * * * * * * * * * 17 0 * * * * * * 3156 0 0 R 18 3873 * * 2988 * * * * 3677 3248 * * * * 3560 2814 2981 1897 * * 18 0 * * * * * * 3156 0 0 R 19 * * * 3677 * * 3916 * 1136 * * 3248 * 3873 2139 * * * * * 19 0 * * * * * * 3156 0 0 L 20 * * * * * * * 2814 * 452 * * * * * * * 2981 * * 20 0 * * * * * * 3156 0 0 V 21 * * * * * * * * * 886 3248 * * * 2981 * * 2139 * * 21 0 * * * * * * 3156 0 0 E 22 3677 * 2981 1354 * 3846 * * 2378 * * * * * 2814 * * * * * 22 0 * * * * * * 3156 0 0 D 23 2981 * 3560 * * 3677 * 2457 2814 3846 * * * * * * 1660 * * * 23 0 * * * * * * 3156 0 0 V 24 * * * * * * * * * 525 * * * * * * * 1712 * * 24 0 * * * * * * 3156 0 0 A 25 221 * * 2814 * * * * * * * * * * * * * * * * 25 0 * * * * * * 3156 0 0 R 26 * * 2349 1163 * * * * * * * * * 3873 2617 2988 * * * * 26 0 * * * * * * 3156 0 0 L 27 * * * * * * 3701 1984 * 1712 * * * * 1453 * * * * * 27 0 * * * * * * 3156 0 0 L 28 * * * * * * * 1170 * 1712 * * * * * * * 1997 * * 28 0 * * * * * * 3156 0 0 Q 29 * * 2814 3677 * 2981 1570 * * * * 2988 * 3560 3248 * * * * * 29 0 * * * * * * 3156 0 0 V 30 * * * * * * * * * 979 3701 * * * * * * 1266 * * 30 0 * * * * * * 3156 0 0 P 31 3846 * * 2988 * * 3248 * * * * * 1211 * * 2315 3916 * * * 31 0 * * * * * * 3156 0 0 S 32 * * * * 2988 * * * * * 3677 * * 2814 * 2628 1371 3248 * * 32 0 * * * * * * 3156 0 0 S 33 3873 * 3916 2981 * 3701 * * 2988 * * 2814 * * * 1794 3248 * * * 33 0 * * * * * * 3156 0 0 A 34 3560 * 3248 * * * * 2981 * * * * * * * 1111 2814 3677 * * 34 0 * * * * * * 3156 0 0 F 35 * * * * 194 * * * * * 2988 * * * * * * * * * 35 0 * * * * * * 3156 0 0 A 36 3579 * * * * * * 1671 * 3273 * * * * * 3111 2566 2222 * * 36 0 * * * * * * 3227 0 0 D 37 * * 1863 * * * * * * * * 686 * 3273 * * * * * * 37 0 * * * * * * 3227 0 0 V 38 2849 * * * * * * 655 * 3273 * * * 4679 * * * 3579 * * 38 0 * * * * * * 3227 0 0 E 39 * * 3728 3579 * * * * * * * * * * 1896 805 * * * * 39 0 * * * * * * 3227 0 0 V 40 * * * * 2849 * * * * * * * * * * * * 216 * * 40 0 * * * * * * 3227 0 0 L 41 * * 2946 2849 * * * * * 1723 * * * * * * * 1223 * * 41 0 * * * * * * 3227 0 0 G 42 * * 3111 2849 * 700 * * * * * * * 2946 * * * * * * 42 0 * * * * * * 3227 0 0 P 43 * * * * * * * * * * * 2026 996 * * 1982 * * * * 43 0 * * * * * * 3227 0 0 A 44 700 * * 2849 * * 3111 * * * * * * * * 2946 * * * * 44 0 * * * * * * 3227 0 0 V 45 * * * * * * * 2849 * 1784 * * * * * * * 809 * * 45 0 * * * * * * 3227 0 0 T 46 * * * * * * * * 2946 * * * * * * 3111 406 * * * 46 0 * * * * * * 3227 0 0 F 47 * * * * 0 * * * * * * * * * * * * * * * 47 0 * * * * * * 3227 0 0 K 48 * * * * * * * * 1791 3111 * * * 2849 1131 * * * * * 48 0 * * * * * * 3227 0 0 V 49 * * * * * * * 944 * 3273 * * * * * * * 1409 * * 49 0 * * * * * * 3227 0 0 S 50 * * 2946 * * * * * * 2311 * * * * 973 2651 * * * * 50 0 * * * * * * 3227 0 0 A 51 2651 * * * * * 3716 * * * * * 1121 2513 * 2946 * * * * 51 0 * * * * * * 3227 0 0 N 52 * * * * * * * * * * * 216 * * * 2849 * * * * 52 0 * * * * * * 3227 0 0 V 53 1785 * 3111 2869 * * * * * * * 3910 * * 2946 3297 * 2651 * * 53 216 * 2849 * * * * 3227 0 0 Q 54 * * * * * * 3771 * 2780 1716 * * * 1470 3110 * * * * * 54 0 * * * * 0 * 2914 0 1000 N 55 * * * * * 1974 * * * * * 424 * * * * * * * * 55 0 * * * * * * 3227 0 0 V 56 * * * * * * * 2045 * 895 4040 * * * * * * 2651 * * 56 0 * * * * * * 3227 0 0 T 57 * * * * * * * * * * * 1379 * * * 1586 1823 * * * 57 0 * * * * * * 3227 0 0 T 58 1133 * * * * * * * * 2810 * * * * * * 1929 2849 * * 58 0 * * * * * * 3227 0 0 E 59 1663 * * 2551 * * * * * * * * * * * 1698 2284 * * * 59 0 * * * * * * 3227 0 0 D 60 * * 1675 1097 * * * * * * * * * 3273 * * 3111 * * * 60 0 * * * * * * 3227 0 0 V 61 3728 * * * * * * 3996 * 2045 * * * * * * 2946 1030 * * 61 0 * * * * * * 3227 0 0 E 62 1206 * * 3579 * * * 2946 * * * * * * * 3996 3716 2222 * * 62 0 * * * * * * 3227 0 0 K 63 4040 * 3910 2497 * * 3111 * 1505 * * 4384 * 3716 3273 * * * * * 63 0 * * * * * * 3227 0 0 A 64 2651 * * * * * * * 1062 3111 * * * 3716 3910 * * 3273 * * 64 93 3996 * 3000 193 * * 3227 1000 0 T 65 627 * * * * * * 1896 * * * * * * * * 3579 * * * 65 0 * * * * * * 3227 0 0 V 66 * * 2946 1974 * 3716 * * * * * * * * * * * 890 * * 66 0 * * * * * * 3227 0 0 D 67 2210 * 3579 2483 * * * * * 3716 * 3111 * * * 2391 2849 * * * 67 0 * * * * * * 3227 0 0 N 68 * * * 2759 * * * * * 3910 1896 1863 * 2590 * * * 3716 * * 68 0 * * * * * * 3227 0 0 K 69 * * * * * * * * 0 * * * * * * * * * * * 69 0 * * * * * * 3227 0 0 D 70 * * 1791 3111 * 3273 4040 * * * * 1794 * * * 2810 * * * * 70 0 * * * * * * 3227 0 0 K 71 3111 * 3910 3716 2759 * * * 2168 3996 * 3728 * 3273 * 2946 * * * * 71 0 * * * * * * 3227 0 0 L 72 * * * * 2849 * * 2946 * 451 * * * * * * * * * * 72 0 * * * * * * 3227 0 0 E 73 2849 * * 700 * * * * * * * * * 2026 * * * * * * 73 0 * * * * * * 3227 0 0 E 74 3716 * * 3579 * 4384 * * 1206 * * * * * 2946 3324 2952 * * * 74 0 * * * * * * 3227 0 0 T 75 2026 * * 1395 * * * * 2849 * * * * 3716 * * 2651 * * * 75 0 * * * * * * 3227 0 0 S 76 * * * * * * * * * * * * * * * 1929 686 3111 * * 76 0 * * * * * * 3227 0 0 G 77 4679 * * * * 57 * * * * * * * * * * * * * * 77 0 * * * * * * 3227 0 0 L 78 * * * * * * * 2946 * 865 3111 * * * * * * 3910 * 2849 78 0 * * * * * * 3227 0 0 K 79 * * * 2026 * * * * 1197 * * * * 3716 3273 * 2849 * * * 79 0 * * * * * * 3227 0 0 I 80 * * * * * * * 283 * 3111 * * * * * * * 3996 * * 80 0 * * * * * * 3227 0 0 L 81 * * 2849 * * * * 3128 * 1183 * * * * * * * 1707 * * 81 0 * * * * * * 3227 0 0 Q 82 * * * 3273 2849 3111 * * * * * * * 965 * 2946 * * * * 82 0 * * * * * * 3227 0 0 T 83 2590 * * * * * * * * * * * * * * 4040 657 2849 * * 83 0 * * * * * * 3227 0 0 G 84 * * * * * 451 * * 2946 * * * * * * 2849 * * * * 84 0 * * * * * * 3227 0 0 V 85 * * * * * * * 1974 * 3273 * * * * * * * 639 * * 85 0 * * * * * * 3227 0 0 G 86 * * * * * 158 * * * * * * * * * 3273 * * * * 86 0 * * * * * * 3227 0 0 S 87 * * 2045 2249 * * * * * * * 2946 * 2810 * 1863 * * * * 87 0 * * * * * * 3227 0 0 K 88 * * * * * * * * 1065 * * * * 2689 1447 * * * * * 88 0 * * * * * * 3032 0 0 S 89 * * * * * * * * * * * 1424 * * * 969 3102 * * * 89 0 * * 0 * * * 2237 0 0 //