HHsearch 1.5
NAME  c4e6kH_
FAM   
FILE  c4e6kH_
COM   /bmm/www/servers/phyre2/HH/hhmake -i c4e6kH_.a3m 
DATE  Wed Jan  9 19:44:37 2013
LENG  33 match states, 33 columns in multiple alignment
FILT  2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100)
NEFF  1.1 
EVD   0.4922  3.0093 
SEQ
>ss_dssp
CEEETTTTEEHHHHCCCSSSCTTHHHHHHHHCC
>sa_dssp
EEBAEDDDCCDEECDECEEDDEBDEDBCDCECE
>ss_pred
CEEEEEEEECCCCEEEEECCCHHHHHHHHHHCC
>ss_conf
979999653178268620022058899987419
>Consensus
myvclcxgvtdxqirvxxqcgkcaxlakqvvre
>c4e6kH_
MYVCLCQGVTDNQIRVGTQCGKCASLAKQVVRE
>UniRef50_B1J4H9(1-51:73) BFD domain protein (2Fe-2S)-binding domain protein n=21 Tax=Pseudomonadales RepID=B1J4H9_PSEPW  E=0.0002 s/c=0.92 id=82% cov=103%
MYVCLCVGVTDGQIRdaiyegccsykdvraatnVASQCGKCACLAKQVVRE
#
NULL   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	
HMM    A	C	D	E	F	G	H	I	K	L	M	N	P	Q	R	S	T	V	W	Y	
       M->M	M->I	M->D	I->M	I->I	D->M	D->D	Neff	Neff_I	Neff_D
       0	*	*	0	*	0	*	*	*	*	
M 1    *	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	1
       0	*	*	*	*	*	*	1111	0	0	

Y 2    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	2
       0	*	*	*	*	*	*	1111	0	0	

V 3    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	3
       0	*	*	*	*	*	*	1111	0	0	

C 4    *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	4
       0	*	*	*	*	*	*	1111	0	0	

L 5    *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	5
       0	*	*	*	*	*	*	1111	0	0	

C 6    *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	6
       0	*	*	*	*	*	*	1111	0	0	

Q 7    *	*	*	*	*	*	*	*	*	*	*	*	*	1000	*	*	*	1000	*	*	7
       0	*	*	*	*	*	*	1111	0	0	

G 8    *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	8
       0	*	*	*	*	*	*	1111	0	0	

V 9    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	9
       0	*	*	*	*	*	*	1111	0	0	

T 10   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	10
       0	*	*	*	*	*	*	1111	0	0	

D 11   *	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	11
       0	*	*	*	*	*	*	1111	0	0	

N 12   *	*	*	*	*	1000	*	*	*	*	*	1000	*	*	*	*	*	*	*	*	12
       0	*	*	*	*	*	*	1111	0	0	

Q 13   *	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	13
       0	*	*	*	*	*	*	1111	0	0	

I 14   *	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	14
       0	*	*	*	*	*	*	1111	0	0	

R 15   *	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	15
       1000	1000	*	4170	82	*	*	1111	1000	0	

V 16   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	16
       0	*	*	*	*	*	*	1111	0	0	

G 17   1000	*	*	*	*	1000	*	*	*	*	*	*	*	*	*	*	*	*	*	*	17
       0	*	*	*	*	*	*	1111	0	0	

T 18   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1000	1000	*	*	*	18
       0	*	*	*	*	*	*	1111	0	0	

Q 19   *	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	19
       0	*	*	*	*	*	*	1111	0	0	

C 20   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	20
       0	*	*	*	*	*	*	1111	0	0	

G 21   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	21
       0	*	*	*	*	*	*	1111	0	0	

K 22   *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	22
       0	*	*	*	*	*	*	1111	0	0	

C 23   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	23
       0	*	*	*	*	*	*	1111	0	0	

A 24   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	24
       0	*	*	*	*	*	*	1111	0	0	

S 25   *	1000	*	*	*	*	*	*	*	*	*	*	*	*	*	1000	*	*	*	*	25
       0	*	*	*	*	*	*	1111	0	0	

L 26   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	26
       0	*	*	*	*	*	*	1111	0	0	

A 27   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	27
       0	*	*	*	*	*	*	1111	0	0	

K 28   *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	28
       0	*	*	*	*	*	*	1111	0	0	

Q 29   *	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	29
       0	*	*	*	*	*	*	1111	0	0	

V 30   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	30
       0	*	*	*	*	*	*	1111	0	0	

V 31   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	31
       0	*	*	*	*	*	*	1111	0	0	

R 32   *	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	32
       0	*	*	*	*	*	*	1111	0	0	

E 33   *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	33
       0	*	*	0	*	*	*	1111	0	0	

//