HHsearch 1.5 NAME c4e61A_ FAM FILE c4e61A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4e61A_.a3m DATE Sat Apr 14 12:55:38 2012 LENG 91 match states, 91 columns in multiple alignment FILT 62 out of 66 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.4 EVD 0.4098 -0.8734 SEQ >ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHTSCC >sa_dssp EEEDDEEDDDDEDDEDEEDEDDDDEDDEEEEDDDDEEDEDDCEDDDDCDDDDEEBDDCBDDCEEEEEEEEDDEEBDECCEEBEEDDEDEDE >ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC >ss_conf 9404579999999999999999999999999999999986889999999999998320220012466520006999999999730336789 >Consensus xpxxxxxxxxxelxxxxxxixxLxxelxelkxxvexLEkERdFYFxKLRdIEilcQxxedxxxxxxxxxxxxxxxxxIxxILYaTeEGFex >c4e61A_ GPLGSLVAIQAELTKSQETIGSLNEEIEQYKGTVSTLEIEREFYFNKLRDIEILVHTTQDLINEGVYKGALLRFVKKVESILYATAEGFEM >UniRef50_A7AM82(310-377:380) Microtubule-associated protein RP/EB family member protein n=1 Tax=Babesia bovis RepID=A7AM82_BABBO E=0.0002 s/c=0.69 id=30% cov=76% --------LENDLKTQKAQIEQLKIQLGQAQAEKQVAKMSKDFYYNKLRKIEIMCQK-----NENGHCD-----VNKLFDIMYATD----- >UniRef50_A8P764(82-160:190) Microtubule binding protein, putative n=1 Tax=Brugia malayi RepID=A8P764_BRUMA E=0.0007 s/c=0.57 id=30% cov=88% -PCSSGRNIAAEIPNTITLQREYELMIQELKENVRILRNQRHFYHDKVRKIKLLCQNAQ---------GSSVIPREEIMAILYETQENF-- >UniRef50_A8BMD1(168-234:238) EB1 n=3 Tax=Giardia intestinalis RepID=A8BMD1_GIALA E=0.0008 s/c=0.67 id=32% cov=68% -----------------------SKELEDLRRQIAKGQLESQFYFDKLHEIEIYMdQMNELMTQVEIAEPEDSPFyiksvVKKIEDILYA------- >UniRef50_A9V243(229-307:317) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V243_MONBE E=3e-18 s/c=1.18 id=39% cov=88% ---GSSAANSQAVKEKQLQVDQLSTEVEELRLTVEGLEKERDFYFGKLRDIEIICQEVPEDQRGST--------IERVFEVLYALEEGFE- >UniRef50_A5KB89(355-428:560) Microtubule associated protein EB1, putative n=2 Tax=Plasmodium RepID=A5KB89_PLAVI E=1e-11 s/c=0.96 id=30% cov=73% -----------QLEKKNSEIVSLQDKLKAQEKEKKLLLFQKNFYYNKLRFLELLCNQTDDD----------SLLVSDIQHIIYARE----- >UniRef50_Q8WQ86(296-363:506) Microtubule-associated protein RP/EB family member 1 n=1 Tax=Dictyostelium discoideum RepID=EB1_DICDI E=4e-10 s/c=0.97 id=32% cov=68% -----------ELEEQKSVIQEMTEKIANFEITIQDIEKDRDFYFERLREAEIFCQDHSD-----------VPLLGEVLKILY-------- >UniRef50_A5DB68(175-253:260) Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DB68_PICGU E=1e-16 s/c=1.11 id=38% cov=84% -----------ELANKSHELEATLEELKDYKISVTSLQAERNFYFNKLREIEVLCETAKNSDTQTP----TSELIAEIQAILYKTEEGFE- >UniRef50_Q5CYH0(175-254:285) EB1 like microtubule binding protein n=2 Tax=Cryptosporidium RepID=Q5CYH0_CRYPV E=1e-11 s/c=0.89 id=27% cov=81% -------NTKNMLPSKNTEIEKLKKSLRKEIEEKEIVDKERMFYFNKLRAIEILYEELNEKKIPFMS-------LKDISEILYDSND---- >UniRef50_Q7PNM5(201-264:265) AGAP005829-PA n=3 Tax=Culicidae RepID=Q7PNM5_ANOGA E=7e-08 s/c=0.91 id=38% cov=43% --------------KTNDRISALSAEINELAMQMQNVEMSREYYFNKLVLIE--------------------------------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 P 2 * * * * * * * * * * * * 0 * * * * * * * 2 0 * * * * * * 2182 0 0 L 3 * 1566 * * * * * * * 1642 * 1548 * * * * * * * * 3 0 * * * * * * 2182 0 0 G 4 * * * * * 1107 * * 1909 * * * * * * 1892 * * * * 4 0 * * * * * * 2525 0 0 S 5 * * * * * * * * * * * * * 1803 * 937 2388 * * * 5 0 * * * * * * 2846 0 0 L 6 * * * * * 2443 * 2582 * 971 * * * * * 2848 * * * * 6 0 * * * * * * 3058 0 0 V 7 2848 * * * * * * * * 2003 * * * 2582 1688 * * 2898 * * 7 0 * * * * * * 3058 0 0 A 8 1870 * * 3459 * * 3751 * * * * 1704 * * * 1976 * * * * 8 0 * * * * * * 3483 0 0 I 9 3859 * * * * * * 2127 * 1420 * 3976 * * * 3917 2332 * * * 9 0 * * * * * * 3900 0 0 Q 10 3481 * * 2347 * * 3917 * 2786 * * 2983 * 1903 * 3976 4466 * * * 10 0 * * * * * * 3900 0 0 A 11 1356 * * * * * * * 3136 * * 2957 * 1995 * * 3107 * * * 11 0 * * * * * * 4013 0 0 E 12 4660 * 4379 808 * * * * * * 4180 * * 2703 * 4428 3541 * * * 12 0 * * * * * * 4330 0 0 L 13 * * * * 4558 * * 3879 * 523 * * * * * 4683 4569 3154 * * 13 0 * * * * * * 4346 0 0 T 14 2670 * * 2541 * * * 5241 3327 4918 * 3835 3194 * * 2148 4675 4902 * 4871 14 0 * * * * * * 4535 0 0 K 15 5014 * 5090 2093 * * * 5324 3023 * * 2780 * 2412 4155 3602 3997 5465 * * 15 0 * * * * * * 4645 0 0 S 16 3638 * * * * * * * 2439 2889 4411 5720 4417 3468 * 2274 2617 5190 * * 16 0 * * * * * * 4655 0 0 Q 17 * * 4876 * * * * 4184 2075 * * 1571 * 2548 3448 5302 5267 * * 5438 17 0 * * * * * * 4706 0 0 E 18 2513 * 4265 2327 * * 4411 5355 5569 5639 * 5302 * 2213 * 2869 3592 * * * 18 0 * * * * * * 4706 0 0 T 19 4659 * 3588 1836 * 5816 * * 4979 4224 * 5430 * 1718 4404 * 3541 4882 * * 19 45 5021 * 1000 1000 * * 4712 1000 0 I 20 * * * * 5853 * * 1018 * 2714 4591 4414 * 4323 * * * 2336 * * 20 0 * * * * * * 4661 0 0 G 21 2717 * 3649 2144 * 5379 * 4110 4267 7015 * 6168 5816 2915 3103 3963 5634 4823 * * 21 0 * * * * * * 4664 0 0 S 22 2496 * 5674 1831 * * * 5843 3541 4557 * 4768 * 3073 5161 2948 3983 * * * 22 0 * * * * * * 4736 0 0 L 23 5870 * * * * * * 4699 * 367 3931 * * * * * 4714 5747 * 4421 23 0 * * * * * * 4736 0 0 N 24 * * 6252 2685 4508 * * * 2902 5435 6202 3663 * 2614 4402 2905 2367 * * * 24 0 * * * * * * 4763 0 0 E 25 2684 * 4812 2422 * * 5994 5446 2309 3305 * 3964 6673 4575 5191 3768 3967 * * * 25 0 * * * * * * 4798 0 0 E 26 * * 4966 1402 * * 5390 * 2539 * 4488 * * 1930 * 3907 5644 * * * 26 0 * * * * * * 4798 0 0 I 27 4046 5864 * * * * * 2046 * 1162 5416 4677 * * * 6131 5596 2882 * * 27 0 * * * * * * 4797 0 0 E 28 3589 * 3787 2626 * 4289 5040 * 2933 4703 4503 3792 * 3690 5520 3469 3837 4666 * 5933 28 0 * * * * * * 4819 0 0 Q 29 5609 * 3340 874 * 6077 * * 4134 * 5493 5277 * 2996 5511 4774 5766 6240 * * 29 16 * 6490 * * * * 4819 0 0 Y 30 3813 * * 3654 5233 * * 6165 * 1342 2697 6352 * 4634 * 5141 * 5893 * 2621 30 0 * * * * * 0 4835 0 1000 K 31 4602 * 6071 3154 * * * 4634 1636 * * 4396 * 2918 1940 5097 * * * * 31 0 * * * * * 0 4835 0 1000 G 32 4735 * * 2228 * 5655 * 2819 5556 2137 4764 4108 * 4686 4838 4279 4163 3992 * * 32 21 * 6094 * * * 0 4835 0 1000 T 33 3050 * 4862 2390 * * 4538 * 5996 5800 6078 4249 * 3787 5354 2938 2202 4273 * 6205 33 0 * * * * * 0 4818 0 1444 V 34 4409 4774 * * * * * 2405 2986 2977 3758 4797 * * * 5711 6300 1588 * * 34 0 * * * * * 0 4818 0 1444 S 35 3553 * 2372 1515 5883 * * 5526 4003 5787 5429 * * 3247 4110 5631 4443 * * * 35 0 * * * * * 0 4818 0 1444 T 36 3755 * 3705 * * 1806 5937 2701 4834 4834 * 4401 * 4452 5315 2850 4548 5411 * * 36 0 * * * * 1022 978 4818 0 1444 L 37 4058 * * * * 4837 * 3615 * 669 4351 * * * * 6170 5442 3734 * 4905 37 0 * * * * * 0 4821 0 1000 E 38 * * 4655 628 * * 5609 * 5481 3821 * 5262 * 3808 4542 * 4080 * * * 38 0 * * * * * 0 4835 0 1000 I 39 5154 * * 5206 4019 * * 5678 1195 4370 4474 4542 * 4123 3072 4537 3811 * * * 39 0 * * * * 0 * 4835 0 1000 E 40 * * 4648 290 * * * * * * * * * 3574 * 4098 * * * * 40 0 * * * * * * 4850 0 0 R 41 * * * * * * * * 3175 * * * * * 226 4860 * * * * 41 0 * * * * * * 4850 0 0 E 42 * * 753 3687 * * 4546 * * * 4658 2397 * 4137 * * * * * * 42 0 * * * * * * 4850 0 0 F 43 * * * * 33 * * * * * * * * * * * * * * 5470 43 0 * * * * * * 4850 0 0 Y 44 * * * * * * * * * * * * * * * * * * * 0 44 0 * * * * * * 4850 0 0 F 45 * * * * 365 * 4546 * * * * * * * * * * * 5481 2658 45 0 * * * * * * 4850 0 0 N 46 5024 * 3265 3147 * 2280 * * * * * 1424 * 4761 5574 3111 * * * * 46 0 * * * * * * 4850 0 0 K 47 * * * * * * * * 38 * * * * * 5260 * * * * * 47 0 * * * * * * 4850 0 0 L 48 * * * * * * * * * 63 * * * * * * * 4546 * * 48 0 * * * * * * 4850 0 0 R 49 * * * * * * 4860 * * * * * * 4803 141 * * 5470 * * 49 0 * * * * * * 4850 0 0 D 50 3929 * 1078 2472 4065 * * * 3699 5470 * 6234 * 4971 4337 6392 6095 * * * 50 0 * * * * * * 4850 0 0 I 51 5260 * * * * * * 430 * 3763 * * * * * * * 2662 * * 51 0 * * * * * * 4850 0 0 E 52 * * * 63 * * * * 4546 * * * * * * * * * * * 52 0 * * * * * * 4850 0 0 I 53 * * 6068 5520 5491 * * 1036 * 2042 * * * * * 5822 6318 2610 * 5920 53 25 5843 * 3000 193 * * 4816 1000 0 L 54 * * * * 3734 * * 2904 * 825 3610 * * * * * * 3977 * 3619 54 0 * * * * * * 4816 0 0 V 55 4413 798 * * 5577 * * 4652 * 4362 4225 * * * * 6008 4789 2823 * 5495 55 94 4346 6160 0 * * * 4816 1507 0 H 56 * * * 4118 * * 4690 * * * * 3940 * 285 5826 * * * * * 56 39 * 5232 * * * 0 4803 0 1000 T 57 4669 * 3929 1917 * * 4406 * 4646 * 4794 3350 5789 3194 4625 3564 3048 4808 * * 57 170 4304 4039 2772 228 * 0 4795 1629 1712 T 58 2855 * 5107 5063 * * 3562 3943 * 4490 * 2516 3369 5105 * 4219 2314 5044 * 5446 58 130 * 3532 * * * 0 4714 0 2432 Q 59 * * 3876 1311 * * * 5553 3779 * 5558 3933 4966 2270 4763 4252 * 5684 * * 59 287 * 2472 * * 2957 199 4603 0 2911 D 60 4234 * 1143 2729 4850 5382 * * * 3547 5200 3650 * 5850 * 4144 5766 * * * 60 389 * 2081 * * * 0 4452 0 3664 L 61 3652 * 2319 5035 * 5098 * 4144 4068 2371 3222 3958 * 3927 * 4288 * 4004 * * 61 100 * 3906 * * 3612 123 4142 0 4026 I 62 * 3895 2241 1783 * 3068 * 4835 3816 4182 * * 5232 3940 * * 4096 * * * 62 220 * 2824 * * 2057 397 4038 0 3907 N 63 3287 * 4942 3692 * 4225 5255 3939 5148 5088 * 2672 3377 2916 4164 3395 4361 * * * 63 0 * * * * 3436 140 4139 0 3422 E 64 4076 * 5271 1248 * 5311 3916 * * 3593 * * 4132 4207 * 3345 * 3186 * * 64 158 5194 3706 0 * * 0 4202 1000 3489 G 65 5295 * 4958 3120 4699 2533 * 4631 3890 4474 * 2208 * 4980 * 2949 3546 * * * 65 136 * 3471 * * 3314 153 4173 0 3486 V 66 * * * 5189 * 2260 * 4058 5362 3619 3807 * 2676 4578 * * 3229 2174 * * 66 295 5075 2686 1585 585 3960 96 4215 1000 3682 Y 67 2918 4308 2391 4310 * * 3353 * 5034 3998 * * 3806 * * 2974 3668 5059 * 3686 67 141 * 3426 * * 3245 161 4016 0 3975 K 68 4887 4096 3289 2518 * 3319 * * 3501 * * * 2957 * * 3404 3229 3152 * * 68 71 * 4378 * * 2446 293 4072 0 4008 G 69 3493 * 3017 * 4131 1921 * 5017 4992 4495 5025 2756 4107 5017 * * 5318 3898 * * 69 112 5142 4423 2000 415 1994 417 4108 1000 3857 A 70 3297 5324 2197 1667 * * * 5577 5257 * * * * 5257 * 1905 * * * * 70 0 * * * * 2067 394 4282 0 3803 L 71 4444 * 3658 2981 * 5589 4896 5441 4096 3775 3856 3609 * 4035 * 2762 4446 2900 * * 71 0 * * * * 1697 532 4419 0 3534 L 72 * * 3439 3598 * * 5244 4511 4684 2293 * 3593 * 5752 * 3067 3115 2746 * 5220 72 123 4497 4730 1260 780 2127 375 4523 1491 3047 R 73 * * 3005 3247 * 4894 * 3380 * 4522 * 3938 1785 3731 4537 5481 3649 5575 * * 73 24 5895 * 0 * 2666 247 4556 1000 2938 F 74 5655 * * * 2035 * * 3870 * 1297 3522 * 4436 * * 4068 4642 5171 * * 74 63 4557 * 2322 322 587 1581 4562 1000 2866 V 75 3994 * * * 6547 * * 2636 5535 1921 4632 * * * 4539 5023 3695 1792 * * 75 0 * * * * 560 1636 4760 0 1787 K 76 4099 * 4742 3218 * 4235 5603 * 1675 * * 2809 * 3209 4065 3893 5685 6293 * * 76 0 * * * * * 0 4764 0 1000 K 77 5224 * 2528 2928 * * 5772 * 1970 * * * * 2477 2898 5272 4880 5547 * * 77 0 * * * * 0 * 4764 0 1000 V 78 6219 * * * * * * 664 * 4689 5406 * * * * * * 1770 * * 78 0 * * * * * * 4807 0 0 E 79 * * * 2768 3535 * 5713 6598 5286 2223 3948 * * 1536 * 4559 4970 6186 * * 79 0 * * * * * * 4807 0 0 S 80 2455 * 2704 2409 * 4905 5537 * 2490 * * 6314 * 3776 3510 4918 4774 * * * 80 0 * * * * * * 4807 0 0 I 81 * * * * * * * 247 * 3957 * * * * * * * 3424 * * 81 0 * * * * * * 4807 0 0 L 82 * * * * * * * 4033 * 213 3713 * * * * * * * * * 82 0 * * * * * * 4807 0 0 Y 83 * * * * * * * * * * * * * * * * * * * 0 83 0 * * * * * * 4785 0 0 A 84 1002 * 4356 3036 * * 4053 * 4500 * * * * 4815 * 2550 5695 * * * 84 29 5662 * 1000 1000 * * 4633 1000 0 T 85 4739 * * * * * * * * 5939 * * * * 4079 3888 287 * * * 85 0 * * * * * * 4510 0 0 A 86 4406 * 2398 649 * * * * * * * 4237 * 4311 * * 5494 * * * 86 0 * * * * * * 4510 0 0 E 87 * * 2310 370 * * * * 5337 * * * * * * * * * * * 87 144 3399 * 1000 1000 * * 4112 1446 0 G 88 * * 4785 * * 251 5054 * * * * 3992 * 5028 * * * * * * 88 0 * * * * * * 3870 0 0 F 89 5290 * * * 193 * * * * 5033 * * * * * * 4935 * * 4768 89 0 * * * * * * 3836 0 0 E 90 4402 * * 310 * * * * 4321 * * * * 3377 * * * * * * 90 0 * * * * * * 3286 0 0 M 91 * * * * * * * 2474 * 1728 3303 * * * * * * 1262 * * 91 0 * * 0 * * * 2727 0 0 //