HHsearch 1.5 NAME c4dndA_ FAM FILE c4dndA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4dndA_.a3m DATE Sat Feb 25 11:27:11 2012 LENG 95 match states, 95 columns in multiple alignment FILT 62 out of 66 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.8 EVD 0.4099 -0.9819 SEQ >ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >sa_dssp EEBEDCDDEACECADEBDDCBEECDEDEEDEEBCDDADDCBDDBCEDADEBDEDBDEBDEDEEEDECDEDDBDEBDDABEDACEBADDACEEBEE >ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 96499999999999999999999961654169999999999999999999999999999473740999999999999999999999988774269 >Consensus DPfxxxxxevxxsixxxxslxxxwxxxxxxxxxxxeLxxxlxxlxxxLxDlexavxxvexxpxkfxlxxxeixxRrxfixxxrxxIxxxkxxxxs >c4dndA_ DPFFVVRGEVQKAVNTARGLYQRWCELEELDWTTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDLQERKVFVERXREAVQEXKDHXVS >UniRef50_B9GV63(11-113:387) Predicted protein n=2 Tax=Malpighiales RepID=B9GV63_POPTR E=6e-13 s/c=0.73 id=21% cov=95% DPLFSAAEVVQDSADRMESLFRLLLHEQNLVRSehpdprllssieyhKRDLATILGTAKWQLEDFERAVN-SSSIANKSQAREDVISRHRQFIIAIREHI NEVE----- >UniRef50_B6KV74(14-105:237) Syntaxin family protein, putative n=3 Tax=Toxoplasma gondii RepID=B6KV74_TOXGO E=4e-09 s/c=0.68 id=19% cov=93% DPYYAARDVTAEGIKDLERSFRDWQHQRGADpkrhaNAGRRLLETLEELLGEVATIEKTVEAAERHAARFGLAPEEVQQRRAFVVAQRDLLK-------- >UniRef50_A3LVJ7(2-98:241) Predicted protein n=8 Tax=Saccharomycetales RepID=A3LVJ7_PICST E=7e-15 s/c=0.84 id=22% cov=101% DPFNEVKEDAWNTVASLESLLRSSAAVggPPPPDTILDFNNNYQELQEIYDDLKQAIAISESSPEKYQLSSADIAARKAVLGDLQNNIADIKSQWDS >UniRef50_A8JFM0(31-129:338) Qc-SNARE SYP6-like protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8JFM0_CHLRE E=3e-14 s/c=0.80 id=20% cov=100% EPFNIIRADIDEQVRVLakgsgELTAAVWAESADVARLAGNLGYDCDALLAELGEVERAMDIVAAEPQRFHVSPAEVQARRSWISTTRDAVRRTAENVA- >UniRef50_B7FRN5(55-160:297) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FRN5_PHATR E=7e-12 s/c=0.68 id=25% cov=101% DPFFVFREDMNRKLELVDEGLAEYLRIvhqtdtavntNELKEAKKQLKRRFKNAESTLKDVYMTVQVVETDRSKFtHISDAELYDRQMLVETSRDRLNRA KNDIQS >UniRef50_Q41380(6-99:183) MRNA, complete ORF n=1 Tax=Senecio odorus RepID=Q41380_9ASTR E=5e-19 s/c=1.01 id=25% cov=96% DPFYIVKDEIQDSIDKLQATFHQWEHIPvasgEQSRLTKELLSNCESIEWQVDELEKAISVAARDPSLYGINQAACDKRRKWTSTARIQVGNIK----- >UniRef50_A6S527(138-239:361) Putative uncharacterized protein n=2 Tax=Sclerotiniaceae RepID=A6S527_BOTFB E=3e-14 s/c=0.78 id=25% cov=98% DPFLQVQADVHHQLSLTRPLFTSYLRIhsltksphptPELLSARSDLTTSLSLLTDDLQDLRDSISAIQADPYKYGLQIEEVSRRVRMIEEIGGEVDDMR EE--- >UniRef50_A2DRC8(3-103:226) Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2DRC8_TRIVA E=1e-11 s/c=0.70 id=20% cov=98% DPFIVAQQDVISDMEKINTLLStRNDMIHDSRGINVDIFNNLGvqsqnliqNVKENLSDLDGAFQQILKNPSRFDISESELTNRKNFLASYNQKLAQFEN Q--- >UniRef50_Q4UI31(8-107:222) Putative uncharacterized protein n=2 Tax=Theileria RepID=Q4UI31_THEAN E=4e-10 s/c=0.66 id=25% cov=98% DPYDEAENKVRKSIRKAillqSQLYDNTGSLKndnnEAVRSGDELASVCSSIENDIGELQKVILAIQQNPNKYKISQTLIDSRQQTINEFKSKLNGIVQH --- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * D 1 * * 39 5215 * * * * * * * * * * * * * * * * 1 0 * * * * * * 5883 0 0 P 2 6090 * * * * 6129 * 5967 * * * * 88 * * * * 6161 * * 2 0 * * * * * * 5883 0 0 F 3 * * * * 609 * * * * 4363 * * * * * * * * * 1758 3 0 * * * * * * 5883 0 0 F 4 * * 4428 * 1479 * 3822 5152 * 3851 * 3284 * * * * 5339 5466 * 1854 4 0 * * * * * * 5883 0 0 V 5 4650 4572 3661 2483 * * * 3907 * 3117 5746 * 5135 3756 5388 2685 * 2492 * * 5 24 5917 * 2000 415 * * 5883 1000 0 V 6 1288 * * * 3220 * * 4014 * 5339 6038 * * * * * * 1462 * 5758 6 0 * * * * * * 5883 0 0 R 7 2205 5466 * 3502 * * * * 1775 * * 5917 * 3040 2047 * * * * * 7 0 * * * * * * 5883 0 0 G 8 3523 * 1987 1780 * 3961 5971 * * * * 4428 * 2915 4048 4830 6080 * * * 8 0 * * * * * * 5883 0 0 E 9 * * 1689 844 * * * * 5426 * * * * * * 6049 5473 3798 * * 9 0 * * * * * * 5870 0 0 V 10 3037 * * * * * * 2207 * 3632 5305 * * * * * 5404 910 * * 10 0 * * * * * * 5870 0 0 Q 11 3983 * 3921 3053 4287 * 5694 5167 4799 4688 * 4850 * 1351 4038 5905 5852 5052 5296 * 11 0 * * * * * * 5870 0 0 K 12 4070 * 2673 2368 * 6989 5694 5997 2338 * * 3616 * 5827 3584 2867 5082 * * * 12 0 * * * * * * 5870 0 0 A 13 3649 * 5167 * * 4402 5884 * 3663 * * 3293 * 3103 * 1296 3014 * * * 13 0 * * * * * * 5870 0 0 V 14 2490 * * * * * * 2191 * 1771 4489 * * * * 5743 * 2110 * 6049 14 0 * * * * * * 5870 0 0 N 15 3989 * 1802 3417 * 5154 * * 3922 5762 * 3063 * 3846 3394 3029 4745 * * * 15 25 * 5884 * * * * 5870 0 0 T 16 4832 * 5373 4852 * 5443 * 5067 2216 2896 * 3852 * 3603 2854 3805 3603 4059 * * 16 22 * 6040 * * * 0 5848 0 1000 A 17 3221 5365 * * * * * 3408 * 1974 2211 6401 * * * * 2807 2747 * * 17 77 4271 * 2191 357 * 0 5834 1826 1506 R 18 5950 6722 5278 1523 * * 5351 5432 4208 5228 5434 3707 5901 3156 2598 5386 4201 * * * 18 23 * 5959 * * 728 1335 5834 0 1506 G 19 4545 * 4133 5291 * 3558 * * 4588 4302 * * 4501 3100 5388 1415 3021 6095 * * 19 0 * * * * * 0 5846 0 1452 L 20 3464 * * 5710 * 5291 * 4196 5642 901 * * * 5383 4645 5388 2882 5013 * * 20 34 5410 * 2807 222 * 0 5846 1000 1452 Y 21 4496 * * * 2249 * 4112 5297 * 2358 5461 * * * 6012 4816 4371 * * 1536 21 37 5297 * 1000 1000 725 1340 5846 1000 1452 Q 22 3488 * 3863 3151 * * 4687 * 6112 6670 * 4748 * 3039 1467 3521 4904 5301 * * 22 77 4262 * 2354 314 * 0 5849 1723 1000 R 23 * * 3596 3914 * * * 6990 3867 3510 6097 3439 * 3899 2270 2903 2782 5236 * * 23 0 * * * * * 0 5849 0 1000 W 24 4855 * * * 3722 * 4614 * * 4187 4164 5153 * * * 5289 5399 5712 1051 2651 24 206 3113 5826 2481 285 * 0 5849 3737 1000 C 25 3087 6471 5145 3808 6171 5379 * 5572 4893 1974 * 4944 4366 3392 3133 3913 4538 5348 * * 25 52 4831 * 2658 249 * 0 5833 1759 1501 E 26 4452 * 5314 3434 * 6003 2821 * 4006 * 5145 3234 4731 3386 2053 3485 5706 * * * 26 23 6003 * 1000 1000 * 0 5833 1000 1501 L 27 * * 4015 3474 5958 4440 * 2009 5370 2404 * 3424 * 3437 * 3935 4803 5277 * 6394 27 500 1773 * 3089 180 725 1340 5833 4369 1501 E 28 3779 * 6149 3755 * 5823 3997 * 2762 * * 5295 1681 2726 4747 4242 4929 * * * 28 284 2486 * 2743 233 * 0 5849 3059 1000 E 29 4224 * 2680 1424 4899 3267 * * * * * 5522 3764 6149 5393 3021 * * * 5381 29 29 5630 * 3453 138 * 0 5849 1701 1000 L 30 3403 * 4477 * 4204 5890 * 3359 4525 1596 * 5479 5289 4687 4882 3065 * 4523 * 4879 30 22 6028 * 3807 107 * 0 5849 1000 1000 D 31 3370 * 2740 3513 * 5092 5479 6147 3544 3730 6781 5890 3994 3845 5153 3632 3970 3210 * * 31 60 4623 * 2199 354 * 0 5849 1792 1000 W 32 4329 * 3533 2863 * 5153 5456 6028 4998 6149 * 4438 * 2909 3125 3123 4863 6065 2673 * 32 22 6071 * 3807 107 * 0 5849 1000 1000 T 33 2456 * * * * * 6071 3604 * 2004 * 6781 4316 5320 6028 4114 2283 3859 * 4659 33 95 4326 6149 3807 107 * 0 5849 1342 1000 T 34 3556 5154 * * * 3991 6078 4292 2895 4217 * 3565 * 3653 2869 3150 3128 * * 4569 34 0 * * * * * 0 5844 0 1455 N 35 4730 * 3467 6748 * 4114 5654 * 2538 5275 * 3889 5964 3903 2320 3160 3379 5136 * * 35 35 5389 * 1000 1000 714 1358 5844 1000 1455 E 36 4855 * 2085 1150 * * * * 4097 * * 5236 * 3478 4021 * 5720 5381 * * 36 29 5627 * 2322 322 0 * 5849 1000 1000 L 37 * * * * 4319 * * 2215 * 545 6073 * * * 5997 * * 5746 * * 37 0 * * * * * * 5863 0 0 R 38 3812 * * 2883 5170 5241 4354 4375 2908 3511 * 4815 * 3704 2463 5831 3746 4825 * * 38 0 * * * * * * 5863 0 0 N 39 3916 * 4856 3785 * 4054 * * 4328 * 5979 2297 * 4614 3851 3210 2357 * * 3574 39 23 5997 * 2807 222 * * 5863 1000 0 G 40 1954 5770 3853 3818 * 4140 * 4170 5408 * * 2970 * * 5310 3955 2623 3878 * * 40 0 * * * * * * 5863 0 0 L 41 * 2504 * * 5310 * * 2456 * 909 * * * * * * 4676 5680 * 5307 41 0 * * * * * * 5863 0 0 R 42 4123 * 3687 2500 * 2112 5266 * 3006 * * * * 4319 3734 3101 4614 * * 5395 42 41 5170 * 3000 193 * * 5863 1000 0 S 43 3963 * 5358 2706 * 5196 * * * 4812 5368 3156 5408 * * 1901 2219 5468 * 5038 43 0 * * * * * * 5863 0 0 I 44 2062 * * * * * * 1914 * 1411 4675 * * * * * 4817 4491 * * 44 13 6789 * 2000 415 * * 5863 1000 0 E 45 4791 * 6687 1395 * * * * 2165 4325 * 5038 * 4575 3319 3877 4048 * * * 45 0 * * * * * * 5863 0 0 W 46 3590 * 5707 2316 * 4647 * * 3904 * * 5438 * 4835 5481 4522 5368 * 1178 * 46 0 * * * * * * 5863 0 0 D 47 * * 1360 3907 * * * 5307 * 5330 * 5170 * 1630 * 5680 3021 * * * 47 0 * * * * * * 5863 0 0 L 48 * * * * * * * 2862 * 528 * * * 5330 * * * 3075 * 5307 48 0 * * * * * * 5863 0 0 E 49 4740 * 2611 1510 * 3794 * 4333 3671 * 6081 3949 * 5707 5882 2923 * * * * 49 0 * * * * * * 5863 0 0 D 50 * * 680 1761 5680 * * 5395 * * * * * 6159 * * 5414 * * * 50 0 * * * * * * 5863 0 0 L 51 * * * * 2275 * * 4441 * 636 * * * * * * * 3270 * * 51 0 * * * * * * 5863 0 0 E 52 5394 * 2490 1201 * * * * 4074 5468 * * * 3011 4030 5496 6607 4705 * 5310 52 0 * * * * * * 5863 0 0 E 53 4899 * 4715 1941 * 4248 * * 2503 * 5310 5038 * 3601 2155 5395 4248 * * * 53 0 * * * * * * 5863 0 0 T 54 1181 * * * * * * * * * 5408 * * * * 2318 1789 4460 * * 54 0 * * * * * * 5863 0 0 I 55 5747 * * * 5170 * * 1356 * 5330 5241 5408 * * * * 4987 1132 * * 55 0 * * * * * * 5863 0 0 G 56 3411 * 3621 3268 * 3295 * * 3540 4620 * 3421 * 3881 2828 2884 5266 5113 * * 56 87 6715 4351 2585 263 * * 5994 1000 0 I 57 2356 * * * * * * 2050 * 3717 3259 * * 5068 4839 5785 3821 2126 * * 57 0 * * * * 681 1411 5934 0 1385 V 58 2180 * * * * * * 2561 * * * * * * * 2432 4870 1357 * * 58 0 * * * * * 0 5963 0 1000 E 59 3082 * * 1076 * * 5027 * 5038 4244 5783 6007 * 3984 5356 2860 * * * 4855 59 23 * 6007 * * 0 * 5963 0 1000 A 60 2506 * 4105 4864 * 4264 * 5646 2301 * * 3968 * 3534 3175 2727 4486 * * * 60 28 5687 * 0 * * 0 5978 1000 1000 N 61 * * 2484 3655 5465 * 3543 4756 5684 * 4618 1356 * * 5588 4079 3928 * * * 61 50 5794 5988 0 * * 0 5978 1000 1000 P 62 3517 4948 5942 * 5799 4606 * * * * * 4830 874 * 3035 3536 * * * 5980 62 23 * 5956 * * 0 * 5980 0 1397 G 63 2997 * 3894 2150 * 4881 * 6067 4430 * 5812 4049 * 3621 5340 2648 4285 5910 * 3730 63 72 * 4359 * * * 0 5963 0 1000 K 64 4696 * * * * * 4714 * 1081 5844 * * * 4753 1438 * * * 5212 * 64 24 5895 * 0 * * 0 5939 1000 1537 F 65 * * * * 676 * * * * * * * * * * 3674 * * 4580 1978 65 200 3183 5695 0 * * 0 5939 2807 1537 K 66 * * 5035 * * 1866 2674 * 3017 * * 2816 * 3496 3395 3925 * 5420 * * 66 38 5281 * 0 * 2247 341 5935 1000 1724 L 67 5716 5724 * * * * * 1532 5442 1114 5747 * * * * * 4982 3625 * * 67 0 * * * * 0 * 5951 0 1626 P 68 4381 5237 1916 4121 * 5393 * * * * * 5961 6487 5714 4273 1552 2834 * * * 68 0 * * * * * * 5970 0 0 A 69 2705 * 2531 2375 * * 6520 5056 4708 6109 * 4678 2435 3996 * 3706 5393 * * * 69 0 * * * * * * 5970 0 0 G 70 2542 * 3717 2248 6055 4362 6105 5886 3547 4672 * 3644 * 4216 5192 3981 3849 5168 * * 70 0 * * * * * * 5970 0 0 D 71 5961 * 2728 672 * * * 5492 * 5436 * * 5884 * 6085 * 3707 4273 * * 71 46 * 4981 * * * * 5970 0 0 L 72 4771 5902 * * * * * 1490 * 1579 * * * * 5820 * 5812 2182 * * 72 0 * * * * 0 * 5959 0 1305 Q 73 2609 * 2784 3677 * * 5393 * 4459 * * 6104 5962 2981 4599 2139 3428 * * 5321 73 0 * * * * * * 5970 0 0 E 74 3268 * 4453 3453 * * * 6668 3944 * * 3647 * 3576 1737 2410 4943 * * * 74 0 * * * * * * 5970 0 0 R 75 * * * * * * 2787 * * * * * * * 226 * * * * * 75 0 * * * * * * 5970 0 0 K 76 5720 * * * * * 5935 5340 1752 * 5857 * * 3199 1100 * 5025 5660 * * 76 24 5935 * 0 * * * 5929 1000 0 V 77 2872 * 4107 6015 * * 5508 * 4429 5449 5273 3455 * 1755 2731 3268 5667 6470 * * 77 0 * * * * * * 5929 0 0 F 78 * * * * 861 * * 5307 * 3869 5660 4404 * * * 5025 5402 5243 2533 4833 78 0 * * * * * * 5929 0 0 V 79 3920 * * * * * * 1318 * 2959 * * * * * 5839 3463 1757 * * 79 0 * * * * * * 5929 0 0 E 80 2996 * 4468 2699 * 3993 * 5781 * * 5564 3495 * 4598 4392 2357 2665 4548 * * 80 0 * * * * * * 5911 0 0 R 81 2156 * 2753 2751 * 5686 5916 4540 4503 * * 3562 * 6281 3081 4155 3576 * * * 81 0 * * * * * * 5911 0 0 X 82 3235 4672 * * 3765 * * 2500 * 3924 4176 * * 5226 * 3718 2494 2763 * 4170 82 0 * * * * * * 5921 0 0 R 83 * * 5707 2923 * 3981 6198 * 2229 * * 5053 * 3596 1231 * * 5647 * * 83 0 * * * * * * 5911 0 0 E 84 4237 * 3231 3393 * 4026 * 4069 3496 * 5650 2457 * 3557 3167 3172 5244 * * * 84 0 * * * * * * 5911 0 0 A 85 4095 * 6337 2059 * * 4640 5245 3275 5205 * 5140 * 1935 3333 6282 4843 4175 * * 85 0 * * * * * * 5898 0 0 V 86 * * * * * * * 1223 * 2133 * * * * * * * 1541 * * 86 0 * * * * * * 5898 0 0 Q 87 3570 * 3601 3184 * 4403 * * 2360 * * 2426 * 4429 3723 2934 * 5482 * 5660 87 0 * * * * * * 5873 0 0 E 88 * 5827 3007 2262 * 3251 * * 5530 * * 2301 * 2350 3399 * 5116 * * * 88 0 * * * * * * 5691 0 0 X 89 3559 * * * 4638 * * 2427 * 4728 1860 * * * * 5009 4574 1914 * 4739 89 0 * * * * * * 5555 0 0 K 90 4601 * * 1932 * * 4950 * 1018 * * * * * 3057 * * 4312 * * 90 0 * * * * * * 5546 0 0 D 91 * * 2150 2042 * 5417 * * * * * 2090 * 3718 * 2338 * * * * 91 0 * * * * * * 5190 0 0 H 92 4045 * 2869 1941 * * 1899 * * * * 3614 * 2379 * * * * * * 92 0 * * * * * * 4744 0 0 X 93 * * * * * * * 3023 * 1197 2396 * * * * * * 3021 2970 * 93 0 * * * * * * 4064 0 0 V 94 1553 * 3048 * * 3350 * * * * * * * 2168 * 3756 3678 3931 * * 94 0 * * * * * * 4018 0 0 S 95 * * * * * * * * * * * * * * * 124 3604 * * * 95 0 * * 0 * * * 3776 0 0 //