HHsearch 1.5 NAME c4dgwC_ FAM FILE c4dgwC_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4dgwC_.a3m DATE Wed Jan 9 22:47:58 2013 LENG 141 match states, 141 columns in multiple alignment FILT 2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.0 EVD 0.4294 0.0743 SEQ >ss_dssp C-----------------------------------CBCCEEEEEECCCSSSTTSCCSCSSTTCCCEEEEEETTCCSSCCCCCCEEEEEECSSSCCBCCE ECSSCSSCCSCCSCCCCCCSSCHHHHHTEEEETTTTEEEEC >sa_dssp E-----------------------------------EEECCCADADBCEEEEDEEEEDEEEDEDDADBEDCDBEEDEDEEEEEDCCCCBCCDDCDECDCD BDDEECDDEEEEEEEEEEDEDCECBECCCECCDEDCCADAE >ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEE CCCHHEEECCCCCCCCCCCCHHHHHCCCCEEECCCCEEEEC >ss_conf 9642122111111111111111111111111112456643079999647887766566742236850212201401431015975999992650001344 18024050344455567311555520220020333078629 >Consensus xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgSxGiAiqVxYssevxExSxDxxDkakvpPxiRIvSxLExsdxkqxxKKfLvIAyEPFexIAIE lPxxEILxsxxxxnxnxxxxVDexNxKxTfWDxxskxxYVQ >c4dgwC_ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSVGXAIQVNYSSEVKENSVDSDDKAKVPPLIRIVSGLELSDTKQKGKKFLVIAYEPFENIAIE LPPNEILFSENNDXDNNNDGVDELNKKCTFWDAISKLYYVQ >UniRef50_C5DEF1(151-247:252) KLTH0C08668p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DEF1_LACTC E=3e-12 s/c=0.75 id=42% cov=70% -------------------------------------SRGIAMRVIYTN--PEPSEDGGDR----PYVRIMSSLEFT-REESDKKYLIIAFEPFKAIAIE IPNEEILTNSAAFNTSGAKSVDDFNSKFTYWDEDNQTLYVQ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * X 1 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 1 * * * * * * * 0 0 0 X 2 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 2 * * * * * * * 0 0 0 X 3 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 3 * * * * * * * 0 0 0 X 4 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 4 * * * * * * * 0 0 0 X 5 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 5 * * * * * * * 0 0 0 X 6 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 6 * * * * * * * 0 0 0 X 7 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 7 * * * * * * * 0 0 0 X 8 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 8 * * * * * * * 0 0 0 X 9 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 9 * * * * * * * 0 0 0 X 10 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 10 * * * * * * * 0 0 0 X 11 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 11 * * * * * * * 0 0 0 X 12 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 12 * * * * * * * 0 0 0 X 13 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 13 * * * * * * * 0 0 0 X 14 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 14 * * * * * * * 0 0 0 X 15 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 15 * * * * * * * 0 0 0 X 16 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 16 * * * * * * * 0 0 0 X 17 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 17 * * * * * * * 0 0 0 X 18 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 18 * * * * * * * 0 0 0 X 19 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 19 * * * * * * * 0 0 0 X 20 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 20 * * * * * * * 0 0 0 X 21 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 21 * * * * * * * 0 0 0 X 22 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 22 * * * * * * * 0 0 0 X 23 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 23 * * * * * * * 0 0 0 X 24 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 24 * * * * * * * 0 0 0 X 25 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 25 * * * * * * * 0 0 0 X 26 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 26 * * * * * * * 0 0 0 X 27 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 27 * * * * * * * 0 0 0 X 28 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 28 * * * * * * * 0 0 0 X 29 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 29 * * * * * * * 0 0 0 X 30 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 30 * * * * * * * 0 0 0 X 31 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 31 * * * * * * * 0 0 0 X 32 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 32 * * * * * * * 0 0 0 X 33 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 33 * * * * * * * 0 0 0 X 34 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 34 * * * * * * * 0 0 0 X 35 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 35 * * * * * * * 0 0 0 X 36 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 36 * * * * * * * 0 0 0 G 37 * * * * * 0 * * * * * * * * * * * * * * 37 0 * * * * * * 1000 0 0 S 38 * * * * * * * * * * * * * * * 0 * * * * 38 0 * * * * * * 1432 0 0 V 39 * * * * * * * * * * * * * * 1071 * * 932 * * 39 0 * * * * * * 1432 0 0 G 40 * * * * * 0 * * * * * * * * * * * * * * 40 0 * * * * * * 1432 0 0 X 41 * * * * * * * 0 * * * * * * * * * * * * 41 0 * * * * * * 1000 0 0 A 42 0 * * * * * * * * * * * * * * * * * * * 42 0 * * * * * * 1432 0 0 I 43 * * * * * * * 932 * * 1071 * * * * * * * * * 43 0 * * * * * * 1432 0 0 Q 44 * * * * * * * * * * * * * 932 1071 * * * * * 44 0 * * * * * * 1432 0 0 V 45 * * * * * * * * * * * * * * * * * 0 * * 45 0 * * * * * * 1432 0 0 N 46 * * * * * * * 1071 * * * 932 * * * * * * * * 46 0 * * * * * * 1432 0 0 Y 47 * * * * * * * * * * * * * * * * * * * 0 47 0 * * * * * * 1432 0 0 S 48 * * * * * * * * * * * * * * * 932 1071 * * * 48 0 * * * * * * 1432 0 0 S 49 * * * * * * * * * * * 1071 * * * 932 * * * * 49 932 * 1071 * * * * 1432 0 0 E 50 * * * 0 * * * * * * * * * * * * * * * * 50 0 * * * * * 0 1000 0 1000 V 51 * * * * * * * * * * * * * * * * * 0 * * 51 0 * * * * 0 * 1000 0 1000 K 52 * * * * * * * * 932 * * * 1071 * * * * * * * 52 0 * * * * * * 1432 0 0 E 53 * * * 0 * * * * * * * * * * * * * * * * 53 0 * * * * * * 1432 0 0 N 54 * * * * * * * * * * * 932 1071 * * * * * * * 54 0 * * * * * * 1432 0 0 S 55 * * * * * * * * * * * * * * * 0 * * * * 55 0 * * * * * * 1432 0 0 V 56 * * * 1071 * * * * * * * * * * * * * 932 * * 56 0 * * * * * * 1432 0 0 D 57 * * 0 * * * * * * * * * * * * * * * * * 57 0 * * * * * * 1432 0 0 S 58 * * * * * 1071 * * * * * * * * * 932 * * * * 58 0 * * * * * * 1432 0 0 D 59 * * 932 * * 1071 * * * * * * * * * * * * * * 59 0 * * * * * * 1432 0 0 D 60 * * 0 * * * * * * * * * * * * * * * * * 60 0 * * * * * * 1432 0 0 K 61 * * * * * * * * 932 * * * * * 1071 * * * * * 61 932 * 1071 * * * * 1432 0 0 A 62 0 * * * * * * * * * * * * * * * * * * * 62 0 * * * * * 0 1000 0 1000 K 63 * * * * * * * * 0 * * * * * * * * * * * 63 0 * * * * * 0 1000 0 1000 V 64 * * * * * * * * * * * * * * * * * 0 * * 64 0 * * * * * 0 1000 0 1000 P 65 * * * * * * * * * * * * 0 * * * * * * * 65 0 * * * * 0 * 1000 0 1000 P 66 * * * * * * * * * * * * 0 * * * * * * * 66 0 * * * * * * 1432 0 0 L 67 * * * * * * * * * 932 * * * * * * * * * 1071 67 0 * * * * * * 1432 0 0 I 68 * * * * * * * 932 * * * * * * * * * 1071 * * 68 0 * * * * * * 1432 0 0 R 69 * * * * * * * * * * * * * * 0 * * * * * 69 0 * * * * * * 1432 0 0 I 70 * * * * * * * 0 * * * * * * * * * * * * 70 0 * * * * * * 1432 0 0 V 71 * * * * * * * * * * 1071 * * * * * * 932 * * 71 0 * * * * * * 1432 0 0 S 72 * * * * * * * * * * * * * * * 0 * * * * 72 0 * * * * * * 1432 0 0 G 73 * * * * * 932 * * * * * * * * * 1071 * * * * 73 0 * * * * * * 1432 0 0 L 74 * * * * * * * * * 0 * * * * * * * * * * 74 0 * * * * * * 1432 0 0 E 75 * * * 0 * * * * * * * * * * * * * * * * 75 0 * * * * * * 1432 0 0 L 76 * * * * 1071 * * * * 932 * * * * * * * * * * 76 0 * * * * * * 1432 0 0 S 77 * * * * * * * * * * * * * * * 932 1071 * * * 77 932 * 1071 * * * * 1432 0 0 D 78 * * 0 * * * * * * * * * * * * * * * * * 78 0 * * * * 0 * 1000 0 1000 T 79 * * * * * * * * * * * * * * 1071 * 932 * * * 79 0 * * * * * * 1432 0 0 K 80 * * * 1071 * * * * 932 * * * * * * * * * * * 80 0 * * * * * * 1432 0 0 Q 81 * * * 1071 * * * * * * * * * 932 * * * * * * 81 0 * * * * * * 1432 0 0 K 82 * * * * * * * * 932 * * * * * * 1071 * * * * 82 0 * * * * * * 1432 0 0 G 83 * * 1071 * * 932 * * * * * * * * * * * * * * 83 0 * * * * * * 1432 0 0 K 84 * * * * * * * * 0 * * * * * * * * * * * 84 0 * * * * * * 1432 0 0 K 85 * * * * * * * * 0 * * * * * * * * * * * 85 0 * * * * * * 1432 0 0 F 86 * * * * 932 * * * * * * * * * * * * * * 1071 86 0 * * * * * * 1432 0 0 L 87 * * * * * * * * * 0 * * * * * * * * * * 87 0 * * * * * * 1432 0 0 V 88 * * * * * * * 1071 * * * * * * * * * 932 * * 88 0 * * * * * * 1432 0 0 I 89 * * * * * * * 0 * * * * * * * * * * * * 89 0 * * * * * * 1432 0 0 A 90 0 * * * * * * * * * * * * * * * * * * * 90 0 * * * * * * 1432 0 0 Y 91 * * * * 1071 * * * * * * * * * * * * * * 932 91 0 * * * * * * 1432 0 0 E 92 * * * 0 * * * * * * * * * * * * * * * * 92 0 * * * * * * 1432 0 0 P 93 * * * * * * * * * * * * 0 * * * * * * * 93 0 * * * * * * 1432 0 0 F 94 * * * * 0 * * * * * * * * * * * * * * * 94 0 * * * * * * 1432 0 0 E 95 * * * 932 * * * * 1071 * * * * * * * * * * * 95 0 * * * * * * 1432 0 0 N 96 1071 * * * * * * * * * * 932 * * * * * * * * 96 0 * * * * * * 1432 0 0 I 97 * * * * * * * 0 * * * * * * * * * * * * 97 0 * * * * * * 1432 0 0 A 98 0 * * * * * * * * * * * * * * * * * * * 98 0 * * * * * * 1432 0 0 I 99 * * * * * * * 0 * * * * * * * * * * * * 99 0 * * * * * * 1432 0 0 E 100 * * * 0 * * * * * * * * * * * * * * * * 100 0 * * * * * * 1432 0 0 L 101 * * * * * * * 1071 * 932 * * * * * * * * * * 101 0 * * * * * * 1432 0 0 P 102 * * * * * * * * * * * * 0 * * * * * * * 102 0 * * * * * * 1432 0 0 P 103 * * * * * * * * * * * 1071 932 * * * * * * * 103 0 * * * * * * 1432 0 0 N 104 * * * 1071 * * * * * * * 932 * * * * * * * * 104 0 * * * * * * 1432 0 0 E 105 * * * 0 * * * * * * * * * * * * * * * * 105 0 * * * * * * 1432 0 0 I 106 * * * * * * * 0 * * * * * * * * * * * * 106 0 * * * * * * 1432 0 0 L 107 * * * * * * * * * 0 * * * * * * * * * * 107 0 * * * * * * 1432 0 0 F 108 * * * * 932 * * * * * * * * * * * 1071 * * * 108 0 * * * * * * 1432 0 0 S 109 * * * * * * * * * * * 1071 * * * 932 * * * * 109 0 * * * * * * 1432 0 0 E 110 * * * 932 * * * * * * * * * * * 1071 * * * * 110 0 * * * * * * 1432 0 0 N 111 1071 * * * * * * * * * * 932 * * * * * * * * 111 0 * * * * * * 1432 0 0 N 112 1071 * * * * * * * * * * 932 * * * * * * * * 112 0 * * * * * * 1432 0 0 D 113 * * 932 * 1071 * * * * * * * * * * * * * * * 113 0 * * * * * * 1432 0 0 X 114 * * * * * * * * * * * 0 * * * * * * * * 114 0 * * * * * * 1000 0 0 D 115 * * 932 * * * * * * * * * * * * * 1071 * * * 115 0 * * * * * * 1432 0 0 N 116 * * * * * * * * * * * 932 * * * 1071 * * * * 116 0 * * * * * * 1432 0 0 N 117 * * * * * 1071 * * * * * 932 * * * * * * * * 117 0 * * * * * * 1432 0 0 N 118 1071 * * * * * * * * * * 932 * * * * * * * * 118 0 * * * * * * 1432 0 0 D 119 * * 932 * * * * * 1071 * * * * * * * * * * * 119 0 * * * * * * 1432 0 0 G 120 * * * * * 932 * * * * * * * * * 1071 * * * * 120 0 * * * * * * 1432 0 0 V 121 * * * * * * * * * * * * * * * * * 0 * * 121 0 * * * * * * 1432 0 0 D 122 * * 0 * * * * * * * * * * * * * * * * * 122 0 * * * * * * 1432 0 0 E 123 * * 1071 932 * * * * * * * * * * * * * * * * 123 0 * * * * * * 1432 0 0 L 124 * * * * 1071 * * * * 932 * * * * * * * * * * 124 0 * * * * * * 1432 0 0 N 125 * * * * * * * * * * * 0 * * * * * * * * 125 0 * * * * * * 1432 0 0 K 126 * * * * * * * * 932 * * * * * * 1071 * * * * 126 0 * * * * * * 1432 0 0 K 127 * * * * * * * * 0 * * * * * * * * * * * 127 0 * * * * * * 1432 0 0 C 128 * 932 * * 1071 * * * * * * * * * * * * * * * 128 0 * * * * * * 1432 0 0 T 129 * * * * * * * * * * * * * * * * 0 * * * 129 0 * * * * * * 1432 0 0 F 130 * * * * 932 * * * * * * * * * * * * * * 1071 130 0 * * * * * * 1432 0 0 W 131 * * * * * * * * * * * * * * * * * * 0 * 131 0 * * * * * * 1432 0 0 D 132 * * 0 * * * * * * * * * * * * * * * * * 132 0 * * * * * * 1432 0 0 A 133 932 * * 1071 * * * * * * * * * * * * * * * * 133 0 * * * * * * 1432 0 0 I 134 * * 1071 * * * * 932 * * * * * * * * * * * * 134 0 * * * * * * 1432 0 0 S 135 * * * * * * * * * * * 1071 * * * 932 * * * * 135 0 * * * * * * 1432 0 0 K 136 * * * * * * * * 932 * * * * 1071 * * * * * * 136 0 * * * * * * 1432 0 0 L 137 * * * * * * * * * 932 * * * * * * 1071 * * * 137 0 * * * * * * 1432 0 0 Y 138 * * * * * * * * * 1071 * * * * * * * * * 932 138 0 * * * * * * 1432 0 0 Y 139 * * * * * * * * * * * * * * * * * * * 0 139 0 * * * * * * 1432 0 0 V 140 * * * * * * * * * * * * * * * * * 0 * * 140 0 * * * * * * 1432 0 0 Q 141 * * * * * * * * * * * * * 0 * * * * * * 141 0 * * 0 * * * 1432 0 0 //