HHsearch 1.5 NAME c4ce4l_ FAM FILE c4ce4l_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4ce4l_.a3m DATE Sat Jan 11 08:59:26 2014 LENG 76 match states, 76 columns in multiple alignment FILT 72 out of 76 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.4 EVD 0.4567 2.0636 SEQ >ss_dssp CCSSCCEEECSSSSCCEEEEECCSSCHHHHHHHHHHHHHHHHSSCCCEEEESSSEEEEESSCCHHHHHHHHHHHCC >sa_dssp EEDCCCDEDEDEEEEECBBBDDDEEEBEDCBEDCCEDBCEEDEEDDBDCCEEEDBDBDBEDDBAEDBDDDBEEDED >ss_pred CCCCCEEEEEECCCEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEEHHHHHHHHHHCCC >ss_conf 9866537668769779999995407389999999997333038875038864099899962024999999983598 >Consensus xxxLPVYxxxkxgtxxxTxIRkIxGDixxLxxdLxxxLxxxxxkxxxxxvxexxgxixikGxxxxxIkxxLxxkGF >c4ce4l_ MHNIPVYRDITHGNRQMTVIRKVEGDIWALQKDVEDFLSPLLGKTPVTQVNEVTGTLRVKGYFDQQLKAWLLEKGF >UniRef50_UPI000180B8B6(94-169:169) PREDICTED: similar to mitochondrial ribosomal protein L49 n=1 Tax=Ciona intestinalis RepID=UPI000180B8B6 E=5e-07 s/c=0.73 id=31% cov=101% FHVLPIVEKEKPRDQPVTVVFYIDGDIWALEKELKELIRPYVEFDPATRVHEVTRSITLKGHHAEVIEKFLYAKGF >UniRef50_B6H448(118-195:195) Pc13g09640 protein n=7 Tax=Trichocomaceae RepID=B6H448_PENCW E=6e-18 s/c=1.18 id=33% cov=100% -NQLPVYVVTKaGGTKQLTKLQKTEGDLDALRNDLASALGVVDGNkpNPDVTLNRLTGHIIVKGWRKPEIVNFLQERRF >UniRef50_Q6BUQ6(53-122:127) DEHA2C08888p n=3 Tax=Saccharomycetaceae RepID=Q6BUQ6_DEBHA E=5e-12 s/c=1.03 id=29% cov=91% --HWPVYKKV-QNTKVTTEIKRIRGDIEQFKNDLLQAHPEL--KPENVMVNKVAGYVNVKGDVVEDIKQIFTE--- >UniRef50_A0C028(59-134:134) Chromosome undetermined scaffold_14, whole genome shotgun sequence n=2 Tax=Paramecium tetraurelia RepID=A0C028_PARTE E=7e-08 s/c=0.77 id=28% cov=97% --NLPVYKKYFARSEVpRTVVRHIEGDVNEFIKELRKVCSNadVIEKVQDETLDQV-GRVEVNGSHTISVRKWLTQIGF >UniRef50_Q6CHQ2(117-186:187) YALI0A06501p n=1 Tax=Yarrowia lipolytica RepID=Q6CHQ2_YARLI E=7e-10 s/c=0.93 id=20% cov=93% LNHIAV-HSWKNSTKVKTEISKITGSAVLLKRDLCKALDLHKS---DVVIAPSGRKIYVRGNMVPEVRTWLEAK-- >UniRef50_A7AMG2(36-103:103) Putative uncharacterized protein n=1 Tax=Babesia bovis RepID=A7AMG2_BABBO E=5e-05 s/c=0.72 id=21% cov=89% --NLAVFVKYRHNNNLaYTYVQKVKGNRKILKQELQVLLGN-------CRIMDTRNAFVIQGNYKNLIVKYLKSIGF >UniRef50_Q21939(103-187:187) Probable 39S ribosomal protein L49, mitochondrial n=2 Tax=Caenorhabditis RepID=RM49_CAEEL E=4e-13 s/c=0.89 id=29% cov=100% -HLLPLYLERKRDLlnektldfdyVELVTIRNVDGDIFACENDLRSYLEEHLGHSIASHVDELKGRIKIKGAPRVLIEQFFYSKGF >UniRef50_Q5KJV4(77-153:153) Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans RepID=Q5KJV4_CRYNE E=7e-16 s/c=1.11 id=29% cov=96% ---LPVYAKYRNDGGCKTIVRKIEGDSHTLKDQLnewfeQSHLDPFT-RPPQATVKPTNGEVQIKGHWVEEIKDFLSDRGF >UniRef50_A7TST6(94-165:166) Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TST6_VANPO E=5e-10 s/c=0.91 id=25% cov=93% --NLPVYSeKINGGSKIITEIRKINGNINQFKLELQEQLPNIPKDKWV--IKQQSNKLIIYADVVDIVKNILSKK-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * 888 * * * * 3040 2042 * * * * * * * * 3391 1 0 * * * * * * 3457 0 0 H 2 * 5180 * * * 4066 1224 * * * * 1511 * * * * * * * 2902 2 0 * * * * * * 4681 0 0 N 3 * * * * * * 3275 * 5085 3832 2568 1159 * 3047 * 5062 * 5080 * * 3 0 * * * * * * 5419 0 0 I 4 * * * * * * * 3146 * 499 6105 * * 5057 * * * 4406 4319 4730 4 0 * * * * * * 5493 0 0 P 5 4301 * * * * * * * * 5792 * * 124 * * 6222 * * * * 5 0 * * * * * * 5503 0 0 V 6 * * * * * * * 3687 * 4416 * * * * * * * 192 * * 6 30 * 5603 * * * * 5503 0 0 Y 7 * * * * 3775 * * * * * * * * * * * * 5117 * 155 7 54 4774 * 2038 403 0 * 5453 1496 1000 R 8 6134 * * 5137 * * 4246 4882 3305 1623 * * 4406 4070 4249 3233 2884 4513 * * 8 26 5813 * 0 * * * 5503 1000 0 D 9 6743 * 1789 2535 * 5283 4758 * 1767 6332 * 6332 * * 4320 4199 * 4542 * * 9 24 5944 * 0 * * * 5503 1000 0 I 10 5276 * * 4377 4336 * 5967 2035 6080 6562 * * 5944 * 4084 * 2712 3452 4241 2190 10 163 3864 4723 0 * * * 5503 2162 0 T 11 * * * * 4864 * * 5644 1130 * * 4862 * * 2039 3045 3475 * * * 11 292 2447 * 0 * 0 * 5465 3504 1616 H 12 5063 * * * 5283 3184 2361 * 4252 * * 2151 5137 4260 2095 4399 * * * * 12 319 2535 5277 0 * * * 5503 3584 0 G 13 6057 * 4013 * * 572 * * 5267 * 5852 2992 * * 4376 4907 * * * * 13 229 2997 5534 0 * 0 * 5493 2838 1593 N 14 * * 5131 * * 4360 * * 5998 4808 * 2007 5656 3272 6260 3558 1317 * * * 14 70 4409 * 3322 152 0 * 5497 1289 1132 R 15 6126 * * 4947 4991 5036 * 4863 1798 4029 * 4656 6080 3821 1955 4707 6280 3756 * * 15 19 6280 * 0 * * * 5503 1000 0 Q 16 5987 6134 * 4416 4465 * 3639 2918 3280 5051 * * 4545 3251 3529 * 4791 2167 4691 * 16 53 4806 * 0 * * * 5503 1582 0 M 17 * * * 5462 4014 * 6126 2345 4844 1909 3729 * * 5528 4936 5254 3401 3817 5909 3946 17 0 * * * * * * 5503 0 0 T 18 * * * * * * * * * * * * * * * * 138 3455 * * 18 37 5286 * 0 * * * 5512 1000 0 V 19 6337 * * 2332 * * 5992 2759 3697 3065 * * * 4043 5667 * 3806 1944 * 5861 19 0 * * * * * * 5512 0 0 I 20 * * * * * * * 686 * 4022 * * * * * * 5794 1742 * * 20 0 * * * * * * 5512 0 0 R 21 6379 * * * 5147 * * * 2453 * * 5018 5794 3864 646 5607 * * * * 21 0 * * * * * * 5512 0 0 K 22 * * * * * 5230 3196 * 819 * * 3207 * * 2637 * * * * 5147 22 0 * * * * * * 5512 0 0 V 23 6179 * * * * * * 849 * * * * * * * * 3896 1528 * 5849 23 0 * * * * * * 5512 0 0 E 24 4890 * 2507 2021 6179 * 3308 * 2781 * * 5825 * 2981 4718 4856 4982 * * 4825 24 0 * * * * * * 5512 0 0 G 25 * * * * * 0 * * * * * * * * * * * * * * 25 0 * * * * * * 5512 0 0 D 26 * * 359 * * * * * 5293 * * 2772 * * 6276 4825 * * * * 26 0 * * * * * * 5512 0 0 I 27 3844 * * 5849 * 6348 * 1444 3758 2658 5993 * 5480 * 4073 5149 * 2514 * * 27 19 * 6273 * * * * 5512 0 0 W 28 5254 * 3873 4209 3785 * 4189 4202 4650 6418 5489 3957 * 3789 5385 3747 4389 4003 2090 5986 28 0 * * * * * 0 5509 0 1000 A 29 1261 * 6077 4926 5916 4876 * 3583 3299 4439 5990 * * 2826 5694 6119 4653 5439 * * 29 59 5207 6264 3807 107 * 0 5509 1000 1000 L 30 * 4012 * * 2642 * * 6591 * 497 4509 * * * * * * 6070 * * 30 0 * * * * * 0 5503 0 1483 Q 31 3380 4848 * 2349 * * 5607 5139 2216 5019 * * * 4078 1898 * 6113 5676 * 5927 31 0 * * * * 1082 922 5503 0 1483 K 32 5458 * 3124 2462 * * 5403 * 2038 4968 * 2601 * 4199 3921 4207 4559 * * * 32 0 * * * * * 0 5506 0 1000 D 33 5144 * 828 1664 * 6076 6653 * 5224 * * * * 5205 6138 * * * * * 33 0 * * * * 0 * 5506 0 1000 V 34 * * * * 6273 * * 3714 * 324 4507 * * * * * * 3875 * * 34 36 6139 6609 2322 322 * * 5512 1000 0 E 35 2522 5603 5283 4109 5385 * * 5272 2747 4343 * * * 2481 2192 4417 * 5114 * * 35 17 * 6428 * * * 0 5503 0 1000 D 36 3268 * 3526 2269 * * * 6290 2097 6059 * 5240 6122 3668 5446 3221 4814 4578 * 6223 36 89 * 4060 * * * 0 5499 0 1577 F 37 2886 * 5344 * 2671 6167 3503 4799 * 2584 * * * 4275 4479 5245 5242 3126 * 3127 37 62 * 4573 * * * 0 5480 0 2641 L 38 * 4608 * * * * 5998 4123 * 393 5322 * * * * * 4797 3982 * * 38 69 4822 6490 2951 200 * 0 5457 1507 2878 S 39 6137 * 4014 2439 4196 2428 * * 4029 * 5850 3990 3048 3916 4365 3263 * * * 5820 39 166 4680 3841 972 1029 1939 436 5458 1969 3089 P 40 6185 * 5052 2327 5358 4082 4823 * 3948 3605 * 2794 2319 4667 4905 4783 * 4742 * * 40 174 5567 3431 1000 1000 2041 402 5427 1000 3367 L 41 5070 * 4937 4589 5519 * 4274 2753 3093 2686 6091 3724 5908 4583 5142 4124 5754 3514 * 4032 41 61 * 4601 * * * 0 5334 0 3699 L 42 4006 3949 6139 5031 * 5023 * 4209 5170 2436 * * 2628 4735 4411 5964 3097 3604 * 3850 42 102 5088 4691 0 * 2106 381 5284 1159 3848 G 43 6206 * * 2833 * 1927 4939 4476 2387 * 5740 3668 4684 5086 4628 3740 5728 6101 * * 43 221 3991 3656 1096 910 1606 574 5291 2173 3818 K 44 4621 * 4445 4898 5022 * 4197 * 1162 5637 4114 4148 6085 6233 2857 4893 * * 6191 * 44 71 4883 6153 562 1632 1591 582 5249 1601 3681 T 45 * * 3149 3374 * 5240 * 3532 4012 4074 * 3528 2650 4005 4706 3648 4058 4162 * 6134 45 21 * 6104 * * 1891 453 5310 0 3500 P 46 5164 2826 3656 4649 4133 * * 2936 5190 3624 * * 2705 5496 4813 4419 * 3916 3678 6203 46 15 * 6572 * * 1193 830 5335 0 3312 V 47 2515 * 2723 2907 * 5970 6159 4231 3885 4261 * 4217 5127 4574 4301 4769 6529 3507 6436 6034 47 132 4378 4677 2005 414 1585 585 5428 1983 2737 T 48 3521 4339 * 5598 * * * 2833 4532 4235 * * * * * 2780 2279 1974 * * 48 0 * * * * 1650 553 5442 0 2822 Q 49 * 5987 * 4014 * * 4412 4615 4567 5241 5348 6315 3625 2509 2339 6272 2463 4225 * 5229 49 0 * * * * 404 2035 5458 0 2456 V 50 4696 * * * 6070 * * 1954 5286 4034 4217 5405 * * * 6432 6026 1007 * * 50 0 * * * * * 0 5486 0 1000 N 51 4432 * 3629 * * 6323 3413 3267 4489 6137 5118 1320 * 4228 3559 4787 * * * * 51 112 * 3741 * * * 0 5486 0 1000 E 52 5288 * 5614 1044 * 6000 6498 * 5077 * * 5128 3560 3333 4000 4307 4667 4391 * * 52 46 * 4994 * * 2120 377 5456 0 2504 V 53 6102 * * * 6025 4464 5356 4145 3847 1985 5114 * 6201 4823 4385 5414 3367 1859 * * 53 48 * 4934 * * 457 1882 5429 0 2348 T 54 3730 6033 * 6209 5251 3878 * 5382 4409 6061 * 2774 3882 * 5693 2505 1855 5076 * * 54 43 5084 * 4895 49 951 1050 5451 1600 2448 G 55 * 5936 4135 * * 1048 * * 3947 * 5172 2786 * 4460 3270 4143 * * * * 55 0 * * * * 937 1066 5503 0 1512 T 56 5850 5204 * 5216 5226 * 2540 4656 2082 * 5788 * * 3249 3637 3685 3266 * 6267 4166 56 38 5277 * 1585 585 0 * 5506 1000 1000 L 57 * * * * 4194 * * 1356 * 2195 * * * * * * * 1572 * * 57 15 6609 * 0 * * * 5512 1000 0 R 58 * 5119 * 2085 5293 5667 4314 2663 4315 5015 6511 4368 * 3625 3571 5286 5147 3737 6086 4929 58 0 * * * * * * 5512 0 0 V 59 * * * * 4462 * * 1139 * 3501 * * * * * 5293 * 1537 * 4571 59 0 * * * * * * 5512 0 0 K 60 * * 5510 4714 * 5293 4734 * 838 * * 4092 * 4461 2485 * * 5849 * 5825 60 0 * * * * * * 5512 0 0 G 61 5825 * * * * 61 * * * * * * * * * 5413 * * * * 61 0 * * * * * * 5512 0 0 Y 62 4429 5667 1834 * * * 3325 * 5293 3076 6326 2112 * 4879 5293 5788 * * 4281 4765 62 0 * * * * * * 5512 0 0 F 63 5526 6584 5219 * 3239 * 1375 * * 5653 5555 * 5651 * 3628 * * 3316 4239 2696 63 0 * * * * * * 5504 0 0 D 64 4426 * 5103 4762 5676 * * 4343 2327 * 6304 * 6467 5966 3727 3530 3888 1516 * * 64 0 * * * * * * 5504 0 0 Q 65 5210 * 3874 2208 * * 5969 5717 3080 6151 5425 3333 3935 4963 3249 3808 4001 4459 * 5920 65 0 * * * * * * 5504 0 0 Q 66 4226 * 3793 1619 * * 6341 3885 3495 4230 5293 * 4447 3572 6060 4902 6136 3437 * 5920 66 0 * * * * * * 5504 0 0 L 67 5676 * * * 5268 * * 1146 * 3498 * * * * * * * 1272 * * 67 0 * * * * * * 5504 0 0 K 68 5966 * 6115 3118 * * * * 945 * 5676 * * 4918 2906 * 4301 3348 * * 68 0 * * * * * * 5504 0 0 A 69 3594 * 3605 2331 6115 * 5601 * 2163 5219 * 4618 * 2701 4115 5505 4375 * * 5125 69 23 5952 * 2000 415 * * 5504 1000 0 W 70 5440 5206 * * 2144 * 6300 4495 * 4993 * * * * * * * 3752 1146 3197 70 0 * * * * * * 5501 0 0 L 71 * 5262 * * 4446 * * * * 155 5070 * * * * * * * * * 71 0 * * * * * * 5501 0 0 L 72 4931 * 4068 3386 * 5957 * 6403 3389 2271 5203 5866 * 3766 3775 3959 3621 4411 * 3351 72 0 * * * * * * 5529 0 0 E 73 3188 * 3518 2179 * 3702 5189 * 3660 4183 5946 5522 * 4357 5875 2161 * * * 5937 73 0 * * * * * * 5529 0 0 K 74 4171 5977 * * 4344 * * 3241 1178 3125 * * * 5794 2329 * * * * * 74 0 * * * * * * 5379 0 0 G 75 * * * * * 153 * * 4973 * * 4306 * * 5774 * * * * * 75 0 * * * * * * 5130 0 0 F 76 * * * * 98 * * * * * * * * * * * * * * 3933 76 0 * * 0 * * * 5115 0 0 //