HHsearch 1.5 NAME c4c8qE_ FAM FILE c4c8qE_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4c8qE_.a3m DATE Sat Oct 19 08:24:45 2013 LENG 83 match states, 83 columns in multiple alignment FILT 110 out of 536 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.0 EVD 0.4380 0.3158 SEQ >ss_dssp CCCHHHHHHTTTTSEEEEEESSSEEEEEEEEEECTTCCEEEEEEEEEECCSSCGGGCEEEEECCSEEEECTTSEEEEEETCCC >sa_dssp EECEECDBEEBCECDABACCEDEDCBCBDACCCDEEDCADADCACCDDCCEDCDECDECDEDCEDECEBDCEDBDEDDDEBCE >ss_pred CCCHHHHHHHHCCCEEEEEECCCCEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCC >ss_conf 95406889997598599999099099999998978578099547999744776555654078702799999819999817889 >Consensus xxxPlxxLxxxixxxVxVxlxdgrxxxGxLxxxDxxxNivLxdxxExxxxxxxxxxxxxxxrxlgxvxiRGxxIxxIxpxxxx >c4c8qE_ EILPLEVIDKTINQKVLIVLQSNREFEGTLVGFDDFVNVILEDAVEWLIDPEDESRNEKVMQHHGRMLLSGNNIAILVPGGKK >UniRef50_C4Q3X2(578-651:664) Family S9 non-peptidase homologue (S09 family) n=7 Tax=Eukaryota RepID=C4Q3X2_SCHMA E=1e-13 s/c=1.05 id=23% cov=88% -------LNKYIDKRIRVKFSGGREAVGILKGCDNLQNMVIDCTTEFLRDPDDPHRLTEDTRELALVVCRGPSVELVCP---- >UniRef50_P40070(1-79:187) U6 snRNA-associated Sm-like protein LSm4 n=7 Tax=Saccharomycetaceae RepID=LSM4_YEAST E=5e-13 s/c=0.95 id=18% cov=93% -MLPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESainSEDNAESSKAVKLNEIYIRGTFIKFI------ >UniRef50_Q0ULJ4(80-175:234) Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0ULJ4_PHANO E=2e-11 s/c=0.73 id=25% cov=93% QILPVDLppqafltsamLLDMVDKKVDVLLRDEKEYIGILRSYDQFANLVLTECHERIAARNPDAEPSSapsvprwlihDVKLPGVMTIRGENVTI---- --- >UniRef50_Q8SRP0(9-68:71) U6-snRNA ASSOCIATED SMALL NUCLEAR RIBONUCLEOPROTEIN n=1 Tax=Encephalitozoon cuniculi RepID=Q8SRP0_ENCCU E=0.0002 s/c=0.78 id=23% cov=73% ----------FIGRTVKVKICDSSEFRGTSVAIDAYLNISLESA--------SYLQDGQEPRYYSSLFIKGSYIDHIA----- >UniRef50_Q55DS0(25-92:114) Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q55DS0_DICDI E=0.0003 s/c=0.68 id=22% cov=59% -------VQEWMDHEIQIIATGNRMIKGVFTCFDKQQNILLNYAYEDVVLPDGQT---------------------------- >UniRef50_A4RG53(7-102:128) Predicted protein n=2 Tax=Sordariomycetes RepID=A4RG53_MAGGR E=5e-08 s/c=0.61 id=18% cov=89% ----IDFLSSLLNKYLRVTTTDTRMFYGVFKCTDPDRNLILAHAHEYRHPTPEqvaahakkvaaakdageadadddKMTLGMTSRYLGLIVVPGEHIVKI ------ >UniRef50_B6AJV5(1-70:315) Putative uncharacterized protein n=1 Tax=Cryptosporidium muris RN66 RepID=B6AJV5_9CRYT E=0.0003 s/c=0.66 id=17% cov=84% ------MVHEYIGSKITIISRNENRYEGILHSIDvDESTITLKDVRHFGTEGRCLPEIPPTPTIFEMIVFRGSDIT-------- >UniRef50_Q5KN63(12-95:95) Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans RepID=Q5KN63_CRYNE E=4e-12 s/c=0.86 id=21% cov=96% ---PLDLVKLALGERVLIKLRGDRIVTGVLHAYDAHMNVVISQAEESIHVVDVTEEGQPlppriERRTAEMLFVRGDGVILLSPAEQ- >UniRef50_B3L891(30-85:96) Small nuclear ribonucleoprotein, putative n=7 Tax=Eukaryota RepID=B3L891_PLAKH E=0.0004 s/c=0.83 id=25% cov=69% --------------QIWLYDKPDTRIEGKILGFDEYMNMVLDESAEV-------SVKKNTRKDLGKILLKGDTITLI------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * E 1 * * * 1222 * * * * * * * * * 808 * * * * * * 1 0 * * * * * * 1775 0 0 I 2 * * * * 4028 * * 1290 * 3964 1834 * * * * * * 2433 * * 2 0 * * * * * * 4413 0 0 L 3 4551 * * * 4608 * * 1970 * 1275 3680 4357 * 3047 * * * * * * 3 0 * * * * * * 5245 0 0 P 4 * * * * * * * * * * * * 42 * * * * * * 5128 4 0 * * * * * * 6180 0 0 L 5 5764 * * * 3610 5833 * 2667 5350 1093 4847 * * 4969 * 4841 3973 4246 * 6200 5 0 * * * * * * 6474 0 0 E 6 3662 6205 1850 3102 * 5925 5876 5705 3134 4397 5518 4960 5433 4182 5846 3903 4032 * * 5506 6 0 * * * * * * 6651 0 0 V 7 6406 * 6083 5806 2740 * * 4243 6313 1351 3754 * 5997 6076 * * 6254 2513 * 4169 7 62 4570 * 3029 189 * * 6817 1608 0 I 8 * * * * * * * 2581 * 445 5341 * * * * * * 3765 * * 8 45 6172 5915 0 * * * 7060 1000 0 D 9 6271 * 5054 2843 4317 5793 4278 * 2716 4109 5397 3254 * 3612 3190 3196 5390 5239 * 6926 9 0 * * * * 0 * 7081 0 1000 K 10 4191 * 4160 2660 * 6459 6124 * 1914 3875 6912 3304 6731 4606 4156 2937 5320 * * * 10 0 * * * * * * 7456 0 0 T 11 2683 4649 6085 6475 2622 5764 5532 5046 * 2908 4311 5103 * * * 3702 6730 4979 4947 2453 11 32 5492 * 1000 1000 * * 7453 1702 0 I 12 * * * 4187 6409 * 6623 2200 4940 1701 3815 * * 5113 5180 * 6311 2225 6456 * 12 54 4773 * 1739 514 * * 7687 2299 0 N 13 * * 2454 3091 6900 1316 5224 * 4562 * * 2628 * 5008 6331 5983 * * * * 13 25 5869 * 1000 1000 * * 7701 1573 0 Q 14 5391 6721 * 3658 5887 5813 3543 * 1614 5629 6644 4947 * 3756 3461 3352 3719 * * 4684 14 14 6698 * 0 * * * 7701 1000 0 K 15 * 5714 6808 3422 * 6742 5507 4299 2631 4570 * 4472 3955 4609 1934 4966 3372 4636 * 6373 15 38 5262 * 1766 502 * * 7612 1681 0 V 16 * * * * * * * 1864 * 3133 4739 * * * * 6500 6411 897 * 6165 16 0 * * * * * * 7612 0 0 L 17 6785 5409 5255 5621 5228 * 4538 4087 3484 2880 5985 6825 * 5176 2713 3644 3151 3585 4323 4779 17 0 * * * * * * 7612 0 0 I 18 * 5143 * * * * * 1632 * 3723 * * * * * * 5995 842 * * 18 0 * * * * * * 7612 0 0 V 19 5745 * 5114 2315 * * 4027 3150 2521 4978 4814 5694 * 5266 3716 5527 4012 3580 * 4402 19 0 * * * * * * 7612 0 0 L 20 5744 5070 6928 5796 4869 * * 3382 * 1049 4861 * * 6533 * 5320 2504 3931 * * 20 8 7454 * 0 * * * 7612 1000 0 Q 21 4624 6711 5152 5741 * * 6731 6949 1972 5789 * 3359 6500 3961 2106 3796 3292 4900 * * 21 58 5519 5834 595 1564 * * 7612 1970 0 S 22 5600 * 1418 4329 * 3121 5709 6473 6807 6679 * 2060 6886 * * 3281 4991 6841 * * 22 0 * * * * 0 * 7705 0 1489 N 23 5172 * 3299 4153 * 843 5650 * 6472 * * 2914 * 6842 5923 4400 5606 * * * 23 26 5815 * 3000 193 * * 7612 1093 0 R 24 6003 * 5699 4164 6714 * 5718 4839 3076 4441 6192 5026 * 4596 1366 3919 3497 4503 * 6810 24 0 * * * * * * 7612 0 0 E 25 4790 5372 5112 2423 6671 5795 6735 3974 4203 4637 4705 6002 * 4273 3418 4180 2760 3413 * 4917 25 14 6713 * 1000 1000 * * 7612 1000 0 F 26 5275 * * * 2666 * * 2263 * 2094 5459 * * * * 5815 6634 3472 * 2098 26 25 5858 * 2000 415 * * 7612 1572 0 E 27 * * 5671 2641 6453 * 5010 2473 4726 5990 6785 5775 * 4978 2654 4708 3578 2768 * 4126 27 12 6953 * 1000 1000 * * 7612 1000 0 G 28 * * * * * 0 * * * * * * * * * * * * * * 28 0 * * * * * * 7612 0 0 T 29 * * * 4522 4678 * 4781 2363 3168 5345 * 6023 * 4695 3639 * 2286 2439 * 5209 29 14 6703 * 2000 415 * * 7612 1000 0 L 30 * * * * 3053 * * 3418 * 606 4208 * * * * 6711 6003 4337 * * 30 0 * * * * * * 7612 0 0 V 31 4989 5567 5100 3498 6501 * 4028 3239 2687 3286 4459 6035 * 4639 3288 5922 4274 3128 * 7005 31 12 6894 * 2000 415 * * 7612 1000 0 G 32 1912 3191 6498 4061 * 2218 * * * 5613 6945 3514 * 6697 6894 2491 6411 6052 * * 32 0 * * * * * * 7612 0 0 F 33 5818 4344 * * 1806 * * 3156 * 3562 * 6598 * * * 4933 4001 2549 7214 2581 33 0 * * * * * * 7612 0 0 D 34 * * 141 4153 * 6319 * * * * * 6442 * * * * * 6288 * * 34 41 5166 * 2565 267 * * 7612 2291 0 D 35 4699 * 3145 3095 * 4473 5314 5060 2509 7317 6769 3177 4053 2580 4838 5501 6049 5065 * * 35 0 * * * * * * 7612 0 0 F 36 4822 * 4136 5285 2233 5595 2274 * 5295 4272 * 4130 * 4297 4868 5883 4657 6741 6703 2766 36 0 * * * * * * 7612 0 0 V 37 4155 4322 * 5789 4321 3589 * 7291 5731 3552 1408 6436 * 5162 5172 4517 4906 4264 4816 5411 37 0 * * * * * * 7612 0 0 N 38 * * 4676 * * 6381 6697 * * * * 166 * * * 4877 6143 * * * 38 0 * * * * * * 7612 0 0 V 39 * 5121 * * 5789 * * 1625 * 1538 3175 * * * * 5745 5563 2900 * * 39 0 * * * * * * 7612 0 0 I 40 4305 5514 * * 5805 * 4674 2213 4783 3789 5595 * * 5818 * 4640 3341 1439 * * 40 0 * * * * * * 7612 0 0 L 41 * * * * 6165 * * 3201 * 332 3893 * * * * * * 5995 * * 41 0 * * * * * * 7612 0 0 E 42 4335 5703 3183 2626 6378 5344 6732 5648 2920 5514 * 4559 * 5280 3932 2451 3526 5999 * 5633 42 26 * 5818 * * * * 7612 0 0 D 43 * 6598 1304 3415 * 5511 4552 * 4774 * * 2119 6170 3828 6281 4251 * * * 6658 43 0 * * * * * 0 7598 0 1514 A 44 1818 2260 * 6170 * * * 5791 * * * * 6172 * * 4049 3117 1805 * * 44 62 6587 4974 3322 152 816 1212 7598 1000 1514 V 45 5171 5426 4255 3353 4966 * 4677 3040 3720 5923 * 6748 * 4785 4692 5141 2228 2715 7012 5183 45 102 * 3874 * * 1631 563 7577 0 2416 E 46 * * 4422 529 * * 5258 4400 * 5550 * * * 4945 3863 * * 4390 * 5898 46 60 5606 5631 2777 227 * 0 7542 1582 4006 W 47 * 6057 6437 4961 3413 * 5632 4204 4676 4789 5376 * 6510 * 2877 3896 2191 3181 5559 3197 47 222 4022 3623 2039 402 2471 287 7526 2847 4224 L 48 4023 * 4131 6490 4762 4546 4786 2293 4474 5657 * * 4920 6535 3149 3353 3660 3685 3980 6530 48 94 6527 4261 2000 415 3309 153 7558 1000 4576 I 49 3745 * 5919 4544 4434 4461 5319 3619 2827 4624 4504 * 3109 6689 3751 4720 3391 4154 7163 4441 49 28 5724 * 1769 501 3633 121 7512 1656 4982 D 50 3757 * 3067 2918 * 3797 6187 4943 4633 6367 * 3118 3920 6269 3422 3628 3598 4551 * 6620 50 62 6437 5038 2585 263 * 0 7505 1000 5143 P 51 4016 * 5461 4691 6201 2509 * 5877 3270 4267 6577 3665 2867 4670 4248 4035 3422 4564 * * 51 61 5381 5861 3798 108 2173 362 7390 1743 5377 E 52 4501 6593 2681 2705 * 4657 6149 5413 3041 4939 * 2561 5280 5375 3485 4352 4787 6495 * * 52 69 6859 4709 4087 87 2303 327 7049 1000 5054 D 53 5603 4673 2898 3226 6034 4102 6327 4744 3071 4487 * 3944 6689 5344 3826 3562 5322 3150 * 5628 53 62 4971 6622 4073 88 3021 190 7037 2145 4921 E 54 4815 * 3160 2976 3580 4032 * 6237 2995 5248 * 5125 3260 4145 5120 4043 4859 4660 * 3995 54 49 5700 6149 4192 81 1478 642 7051 1646 4745 S 55 3254 6605 3905 3862 5681 3327 3885 4683 4305 4237 5292 4119 4087 5462 4493 3842 3962 4846 5487 5643 55 70 * 4399 * * 1765 503 7131 0 4207 R 56 5314 * 3864 2843 * 3763 * 4761 2773 4420 * 3685 3973 3731 3929 3992 6218 3642 6510 6204 56 50 6763 5322 0 * 1868 462 7091 1000 4196 N 57 5272 * 4030 3017 6642 4135 * 3330 3723 3412 4381 2882 5111 4082 6263 3234 5031 5605 * 6481 57 122 5529 4074 2288 331 2146 369 7053 1683 4030 E 58 5506 * * 3071 * 2774 6627 4610 3233 4210 5656 3997 4042 3925 4662 3164 3502 4897 * 5683 58 15 * 6627 * * * 0 6918 0 4648 K 59 5242 * 4720 2599 4781 3518 5483 5679 2387 6776 6171 3160 4074 4602 5540 4303 4747 4153 * 6283 59 173 4101 4187 3534 130 1436 666 6915 3012 4816 V 60 4897 * 4497 2204 6206 6029 * 4658 2993 5002 5614 5835 5277 3727 4149 3757 2916 3900 * 6545 60 70 6770 4718 0 * 2138 372 6955 1000 4559 M 61 5369 * 4597 3585 * 5846 * 4342 2345 4739 6683 * 3639 3725 3634 5379 2623 3087 * * 61 46 5643 6419 3644 120 2497 281 7077 1638 4493 Q 62 5366 6219 * * * 5608 6106 4080 2943 4220 * 4141 6396 4942 1306 5532 3713 3623 * * 62 30 6617 6577 4248 78 * 0 7096 1000 4305 H 63 6122 6585 4599 4025 3752 * 4117 4431 2999 4321 5697 3523 4850 4286 3874 3448 4116 4741 * 3793 63 14 6686 * 0 * 1863 464 7074 1000 4319 H 64 6790 * * 6112 4497 * 4258 2362 * 1323 4519 5372 5595 * * * 6589 3563 5965 3535 64 55 6866 5132 2322 322 1633 562 6962 1000 3943 G 65 5525 * 3816 3726 * 881 * * 4442 * * 4359 3867 5323 6650 3463 * * * * 65 19 6244 * 0 * 1684 538 7008 1000 3908 R 66 6298 6094 4100 3372 6973 * * * 4365 2004 3272 6603 * 2867 4205 4985 3013 4553 * 6838 66 18 6312 * 1000 1000 822 1204 7065 1000 3205 M 67 3198 4927 * 6626 6331 * * 2689 6381 2939 2903 * * * * * 4809 1666 * 4222 67 0 * * * * 647 1468 7104 0 2122 L 68 * * * * 1836 * * 3269 * 2146 3572 * * * * 6511 4992 2382 * 3798 68 14 6672 * 0 * * 0 7108 1000 1000 L 69 * 5159 * * 5111 * * 1193 * 2014 5609 * * * * * * 2073 * * 69 17 6405 * 2322 322 0 * 7104 1000 1000 S 70 * * * * * * 6029 * 3321 * 5857 5616 3693 * 415 5663 * * * * 70 0 * * * * * * 7067 0 0 G 71 * 6351 * * * 91 * * * * * * * * * 4350 * * * * 71 0 * * * * * * 7067 0 0 N 72 6597 6567 1977 2502 * 5374 6465 * 5203 6845 * 2528 4546 5356 6482 2455 4533 * * * 72 0 * * * * * * 7070 0 0 N 73 4788 5849 5426 4989 6389 5050 3052 * * * 6451 1653 6341 3408 5830 2521 3693 * * 5382 73 13 6851 * 0 * * * 7070 1000 0 I 74 * * * * * * * 949 * 4410 * * * * * * * 1201 * * 74 31 5547 * 1178 841 * * 7097 1609 0 A 75 3627 6110 5387 5171 6514 6635 * 3184 4651 2672 4705 * * 6034 3864 4543 3312 1947 * * 75 16 6523 * 0 * * * 7088 1000 0 I 76 * 6370 * 5942 2389 * 4686 3565 5833 2331 3665 * * * * 3843 3671 4529 6068 2682 76 19 6227 * 1000 1000 * * 6912 1000 0 L 77 * 6187 * * 4385 * * 830 * 3076 5164 * * * * * 5942 2231 * * 77 28 5725 * 0 * * * 6811 1000 0 V 78 3022 3945 * * * 4260 * 3567 * * * 5446 * * * 1661 3788 2450 * 3631 78 98 3934 * 1585 585 * * 6379 1000 0 P 79 * * * 3509 * * * 4447 4422 * * * 372 * * * 4406 * * * 79 84 4152 * 1000 1000 * * 5059 1000 0 G 80 2608 * 3791 4031 * 1564 * * * * * 3865 3291 * * * 2369 * * * 80 0 * * * * * * 4682 0 0 G 81 3711 * * 1416 * 1490 * * * * * * 2944 * * * * * * 3990 81 0 * * * * * * 4634 0 0 K 82 * * * 1058 * * * * 1393 * * * * 2847 * * * * * * 82 0 * * * * * * 4373 0 0 K 83 * * * * * * * * 609 * * * * * 1538 * * * * * 83 0 * * 0 * * * 2119 0 0 //