HHsearch 1.5 NAME c4bx9C_ FAM FILE c4bx9C_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4bx9C_.a3m DATE Sat Jul 27 08:33:07 2013 LENG 95 match states, 95 columns in multiple alignment FILT 59 out of 63 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.2 EVD 0.4418 0.2520 SEQ >ss_dssp CTTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTCCHHHHHHHHHHTTCHHHHHHHHHHTTCCHHHHHHHHHHHHCC >sa_dssp DEBEEDCDECDECADDDDEEEDEEBADDBDDDBDBADCADEBCEDDDEEBCECDCDDAACDABEEEDEEDBCDBAEDCEBDEEEBEEBDDECEEE >ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC >ss_conf 98799999999999999721107999999999999999999999857541789799999999980992279999997199856888888966509 >Consensus xxxxxrxxxLxxAxxxxxxskxxfxxkxxxeqxxLLxxQxxLexxxxxxfvgxSlxxTixxLixxgxxkxAxklxkeFkVpdkrfwxxklxaLae >c4bx9C_ ERIEGRVAALQTAADAFYKAKNEFAAKATEDQMRLLRLQRRLEDELGGQFLDLSLHDTVTTLILGGHNKRAEQLARDFRIPDKRLWWLKLTALAD >UniRef50_B3LD49(753-859:950) Vps16-like protein n=4 Tax=Plasmodium RepID=B3LD49_PLAKH E=2e-07 s/c=0.53 id=24% cov=100% KNLDQKKTWLAYAAGFLTTDQMNSHMKFVHKSlmnnIDLLNYQKELEIKYNKKSVigyphkiqGLSLMGTVEYTLSVGEFLDADHIFKKFKISEPKFWRC KIHALA- >UniRef50_B9W7M7(754-836:947) Vacuolar protein sorting VPS16 homologue n=3 Tax=Candida RepID=B9W7M7_CANDC E=9e-06 s/c=0.62 id=27% cov=87% -------------TKCINRSTNQRISKALQREIQILELQKKLSDTYLADFYqDKALMGILKRLIVMNQIKPAKKIAANFQLSVEKFWYLVLNTLMD >UniRef50_Q16SL9(653-739:841) Vacuolar protein sorting vps16 n=4 Tax=Eukaryota RepID=Q16SL9_AEDAE E=4e-20 s/c=1.14 id=30% cov=85% ---------------NYKKANRMLEADACDEAKKLMKHQKVLDEKYQKRLYGLPLHETIRQLLLLGDIKYADRLKSEFKVPERRYWWLRISVLSQ >UniRef50_B7G3T9(849-953:1055) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G3T9_PHATR E=4e-14 s/c=0.75 id=26% cov=98% --VREKQGMLAEASRIFGISKETaFQKSCTDDYLDLRKDQEVLRNKYGSVDVapeSSSVTATISSIVKfaasnireqHRLLADADKVAKKFRVAEKRLWH IKVIAFA- >UniRef50_A0CVA3(682-779:884) Chromosome undetermined scaffold_29, whole genome shotgun sequence n=4 Tax=Paramecium tetraurelia RepID=A0CVA3_PARTE E=2e-10 s/c=0.68 id=23% cov=97% --LTEKIRFLEFAQKYFeEESKDSFYSKILQEQIRTLNdLKQEVEREKKEKIKavmeEKPLNSIMETFLSKDNIQLAQEFAKTYKIPERRFNITRVKAL- - >UniRef50_Q03308(606-696:798) Vacuolar protein sorting-associated protein 16 n=8 Tax=Fungi/Metazoa group RepID=VPS16_YEAST E=5e-14 s/c=0.86 id=25% cov=92% ---------LPQIKDLYSQVQNSEVVNNTIEQLqrqeKLWIYQESLGKRFAISFTNMTLDQTLSKLIETGQDKQVKEIVKKFKISEKKLYHLKCKTLVE >UniRef50_D0MR36(237-325:400) Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0MR36_PHYIN E=7e-12 s/c=0.81 id=26% cov=86% -------------KQCVARSVDSFNQVMTNEMLQLLETQRAMERTLAIPaglLVGSSLVETIQKLVTLHPVHRqallvAVDCAEQYTVPPRQFWWTLLRV LA- >UniRef50_D2V809(850-943:1043) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2V809_NAEGR E=4e-10 s/c=0.70 id=27% cov=89% ---------IEKAETYFKErSADKLDLEFAVKERELYGLQLKLEDETDEEFVGASLQDTLYRVMtsealkaKKGERKKFVKvLKKNFGVSPKRYYYSKIK AL-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * E 1 * * * 2977 * * * * 788 * * * * 1767 * * * * * * 1 0 * * * * * * 2746 0 0 R 2 * * * * * * * * * * * 1454 * 2095 1319 * * * * * 2 0 * * * * * * 3177 0 0 I 3 * * * * * * * 3622 * 1508 4695 * 3972 * * 4461 * 1253 * * 3 0 * * * * * * 4091 0 0 E 4 * * 1529 1785 * * * * * * 4728 3231 * 4711 3747 * 3231 * * * 4 0 * * * * * * 4198 0 0 G 5 4575 * 3641 1478 * 5246 * 4865 4953 * * * * 2115 * 2358 * * * * 5 0 * * * * * * 4423 0 0 R 6 * * * * * * * * 1246 * * * * * 790 * * * * * 6 0 * * * * * * 4549 0 0 V 7 4611 * 5311 5394 * * * 1937 3553 2391 3209 * * 4553 * * 3247 3096 * * 7 0 * * * * * * 4644 0 0 A 8 2691 * 3217 3005 5239 3657 * 5267 2614 * * * * * 2793 5290 2756 * * * 8 0 * * * * * * 4727 0 0 A 9 2712 5058 * 4512 4278 4804 5054 4838 3335 2169 4059 * * 5393 * 2855 4756 * 4623 * 9 41 5160 * 1000 1000 * * 4715 1000 0 L 10 * * * * 4891 * * 3090 * 292 * * * * * * * * * 4961 10 0 * * * * * * 4889 0 0 Q 11 3342 * * 2823 * * 5436 * 2790 5390 * 3279 4591 2503 2989 3843 5415 * 5137 * 11 0 * * * * * * 4889 0 0 T 12 4364 * 4029 2654 4362 * * * 2624 3858 * 5023 * 3194 3860 2873 4593 5187 * 4749 12 0 * * * * * * 4889 0 0 A 13 110 * * * * * * 4591 * * * * * * * 4961 * * * * 13 0 * * * * * * 4889 0 0 A 14 2086 * * 3893 * * 5416 3372 2718 4757 * * * 2953 4039 3299 3724 5579 * * 14 0 * * * * * * 5010 0 0 D 15 * * 2795 2572 * 4893 * * 2311 * 5281 3640 * 4654 2426 5164 3428 * * * 15 0 * * * * * * 5081 0 0 A 16 3475 3033 * 5627 4209 5079 4222 3473 4226 2649 5181 3138 * * 4094 5390 * 5331 * 3661 16 0 * * * * * * 5090 0 0 F 17 * 4507 * * 1202 * * 4528 * 3415 * * * * * * * 4678 * 1535 17 63 4555 * 0 * * * 5090 1000 0 Y 18 2794 * 5390 4555 * 2880 5431 * 2975 * * 3572 * * 4292 2557 2805 4653 * 6037 18 0 * * * * * * 5090 0 0 K 19 5623 4890 3537 2257 * * 5495 5016 2607 4154 * 3952 * 2926 2745 * 4976 * * * 19 47 4958 * 0 * * * 5192 1000 0 A 20 1839 5186 3662 * * 3982 5322 * 5694 * * * * * * 1521 3423 3948 * * 20 0 * * * * * * 5232 0 0 K 21 4399 * 5663 * * 2929 * * 1190 * * 5706 * 3476 2730 * 3870 4829 * * 21 114 3712 * 1021 979 * * 5232 2267 0 N 22 * 3041 2261 2458 * * * * * 5286 5071 1701 * * 4697 4079 5198 * * * 22 215 2852 * 314 2354 * * 5221 2696 0 E 23 3733 * 2668 3951 * * 5742 * 3930 4417 5718 5071 4065 3454 * 2269 3651 3559 * * 23 187 3038 * 1261 779 * * 5221 2772 0 F 24 5631 * * 4984 966 5558 * 4650 4943 2872 4938 * * * 5154 3314 5114 5960 * * 24 0 * * * * * * 5173 0 0 A 25 3794 4646 3855 1957 * 5992 3794 4224 * 4368 5408 4044 * 3893 * 3537 4453 4984 * 4141 25 0 * * * * * * 5173 0 0 A 26 1519 * * 5557 * * 5219 * 3355 3465 4030 * * 3489 4761 2514 5581 4984 * * 26 0 * * * * * * 5173 0 0 K 27 4064 * 5812 3430 * * * * 1193 * * 4541 * 4630 3745 3118 3979 5015 * 5330 27 0 * * * * * * 5246 0 0 A 28 2012 3060 * * 3862 * * 2641 * 2776 3939 5214 * 4675 * 4230 4114 6077 * * 28 0 * * * * * * 5358 0 0 T 29 4443 3262 * * 5000 * * 2903 * 2773 * * * * 5342 5869 1715 2605 * 5165 29 0 * * * * * * 5358 0 0 E 30 4292 * 2864 1438 * 5810 4596 4061 4822 5495 * 3643 * 3170 * 5021 5950 5172 * * 30 0 * * * * * * 5358 0 0 D 31 4233 * 2566 1150 * * 5021 * 2941 * * 5823 * 5082 3619 4726 * * * * 31 0 * * * * * * 5358 0 0 Q 32 3022 * * 2086 * * 4856 * * * 4285 * * 1239 * 4699 4354 * * 4492 32 32 5502 * 2000 415 * * 5438 1000 0 M 33 3842 5377 * * * * * 1746 4765 2556 2788 5199 * 5000 4323 3519 5711 4580 * * 33 28 5677 * 2000 415 * * 5497 1000 0 R 34 5696 * 3206 2737 * * * * 2027 5070 * 4026 * 3179 2634 3827 4508 * * * 34 0 * * * * * * 5439 0 0 L 35 * * * * * * * 3460 * 191 * * * * * * 4912 * * * 35 0 * * * * * * 5446 0 0 L 36 * * * 6145 4882 * * 2942 * 598 5241 * * * 4576 * * 5605 5096 4537 36 0 * * * * * * 5446 0 0 R 37 5962 * 3584 2414 * 4112 * 4895 2415 5406 6145 3613 * 3458 2478 4507 * * * * 37 49 4912 * 0 * * * 5446 1000 0 L 38 * * 4119 3256 3548 * 4046 4441 * 2013 3805 * * * * 6082 5213 4840 5308 2154 38 37 5308 * 0 * * * 5446 1000 0 Q 39 * * * * * * * * 4163 * * * * 125 5214 * * * * * 39 0 * * * * * * 5446 0 0 R 40 5706 * 4556 2653 * 5706 4996 4736 2656 4046 6318 * * 3369 2858 3566 3105 5369 * * 40 0 * * * * * * 5446 0 0 R 41 2936 * 5406 2698 * 6312 * * 2515 * * 3178 * 4209 2934 3482 4373 3817 * * 41 0 * * * * * * 5446 0 0 L 42 * * * * 5022 * * 4411 5308 411 3970 * * * * * * 4912 * 4379 42 0 * * * * * * 5446 0 0 E 43 5890 * 2817 1107 * 5068 * * * * 5148 * * 3677 4577 2992 4396 5290 * * 43 46 4996 * 0 * * * 5446 1199 0 D 44 4282 * 3441 2683 * 5056 5455 5557 3170 * * 3112 * 6311 2214 3355 4129 5882 * * 44 0 * * * * * * 5446 0 0 E 45 6345 * 3613 1919 * * * 4624 2092 4546 * 6138 * 4131 4185 5322 2535 * * * 45 0 * * * * * * 5472 0 0 L 46 4617 * 5952 5934 3892 * 5083 4744 3687 1751 * * 4482 6100 * 5516 4700 * * 1746 46 61 4596 * 3703 115 * * 5472 1689 0 G 47 3579 * 4942 3270 * 2516 3865 * 2677 3949 * 2698 * 2907 * * 5150 * * * 47 60 4606 * 2477 286 * * 5495 1649 0 G 48 3760 6284 3068 2522 * 5439 4346 4011 4036 * * 4365 * 3508 4841 2868 4535 4243 * 5608 48 252 2642 * 2303 327 * * 5495 3319 0 Q 49 * * 3174 3381 * 4659 * 4634 2513 5963 5804 2880 3949 3747 3786 3091 5809 5542 * * 49 274 2533 * 1038 963 * * 5495 3716 0 F 50 * * 5542 5804 600 * * 4503 * 2757 * * * * * 5631 * 4835 4599 6319 50 0 * * * * * * 5495 0 0 L 51 * * 6078 4669 * * 5426 4523 3879 2819 * 4083 * 5429 6349 * 3195 1331 * 3871 51 205 2918 * 1805 486 * * 5495 3020 0 D 52 * * 3665 3161 * 942 * * * * * 3003 * 5193 4906 3953 5286 * * 6252 52 0 * * * * * * 5495 0 0 L 53 3792 5569 * 4700 * 6078 * 6146 3128 1300 3815 * * 4670 4715 3072 4280 * * * 53 0 * * * * * * 5495 0 0 S 54 5613 * * * * * * * * * * 5518 3575 * * 414 3018 * * * 54 0 * * * * * * 5495 0 0 L 55 5193 5426 * * * * * 3836 * 721 * * * * * * * 1875 * * 55 0 * * * * * * 5495 0 0 H 56 4313 * 3143 * 5429 5055 3164 5677 5334 * 3822 2153 * 4331 5309 3258 3912 3877 5818 * 56 0 * * * * * * 5495 0 0 D 57 3816 * 1614 2254 * 3638 4621 * 5443 * * 4714 5575 3396 5334 4930 4753 * * * 57 0 * * * * * * 5495 0 0 T 58 5309 * * * 5735 * * 3415 * * 5334 * * * * * 356 4157 * * 58 0 * * * * * * 5495 0 0 V 59 6405 * * * * * * 1183 * 1974 3426 * * * * * * 2321 * * 59 0 * * * * * * 5495 0 0 T 60 4322 6328 * 2874 4918 4888 4187 5575 3368 4817 * * * 4855 2877 3515 5029 3981 * 2523 60 0 * * * * * * 5495 0 0 T 61 6078 * * 5424 * * * 5436 2086 3455 * 6284 * 3012 2678 3483 2635 * * 3866 61 0 * * * * * * 5495 0 0 L 62 4468 2791 * * 4930 * * 4667 * 596 5677 * * * * * 5631 4761 * * 62 0 * * * * * * 5495 0 0 I 63 4504 * * * 5193 * 5334 1276 * 1694 4841 * * * * * 6319 3375 * 4715 63 29 5638 * 2807 222 * * 5495 1000 0 L 64 4116 5309 * 2519 3803 * * 5735 2319 3437 * 6136 * 4070 3485 4238 3695 3916 * * 64 31 5542 * 3170 170 * * 5495 1000 0 G 65 * * 5752 4998 * 6625 3150 3400 3594 1851 2370 5379 * 6136 5206 4703 6136 4525 * 5804 65 34 5429 * 0 * * * 5495 1000 0 G 66 * * 4930 5335 * 955 3469 * 3235 * 5896 2616 * * 5542 5122 * * * * 66 0 * * * * * * 5495 0 0 H 67 5804 5334 4277 2693 5735 * 4567 * 5752 2591 5984 3531 5348 1948 3968 * * * * 4173 67 41 5963 6356 0 * * * 5495 1000 0 N 68 6267 * 3423 2938 4746 4188 3935 2926 * 2564 6067 3927 6121 * 4520 5970 3846 4005 * 5739 68 0 * * * * 0 * 5497 0 1000 K 69 5542 * 4682 4077 * 4096 4596 * 982 5631 * 5426 * 4451 2947 4174 * * * * 69 0 * * * * * * 5495 0 0 R 70 4416 * 2844 3463 * * 5608 * 3668 3090 6252 * 3360 3072 2667 * 5309 3844 * 5336 70 91 4035 * 2633 254 * * 5495 2212 0 A 71 330 * * * 5638 * * * * 3635 * * * * * * 5608 3581 * * 71 0 * * * * * * 5495 0 0 E 72 4779 * 2736 1970 * 4665 6135 6034 2873 3866 * 3786 * 3264 5818 4465 * 4485 * * 72 0 * * * * * * 5495 0 0 Q 73 4779 * 4137 3697 * 6097 4938 * 1393 * * 5896 * 3295 2595 4042 4523 6232 * * 73 29 5638 * 0 * * * 5495 1000 0 L 74 * 5348 * * 4283 * * 2606 * 828 3806 * * * * * * 3001 * * 74 0 * * * * * * 5495 0 0 A 75 2215 4628 * * 4837 * * 4066 2029 5818 * * * 4133 2226 * 6035 3312 * * 75 0 * * * * * * 5495 0 0 R 76 4183 * * 5348 * * 5429 * 1104 * * 3120 * * 3927 2619 3500 * * * 76 0 * * * * * * 5495 0 0 D 77 4018 * 2659 1316 * * * 5443 2396 * * 4625 * 4188 * * 4230 5896 * * 77 0 * * * * * * 5495 0 0 F 78 * * * * 436 * * * * 3595 * 5309 * * * * * * 5735 2900 78 0 * * * * * * 5495 0 0 R 79 * 5193 5837 * * 4478 5429 * 771 * * 3806 * 3867 3556 4888 5348 5807 * * 79 0 * * * * * * 5495 0 0 I 80 * * * * 5326 * * 1694 * 3647 4313 * * * * * * 900 * * 80 26 5818 * 1585 585 * * 5495 1000 0 P 81 5542 6097 5286 * * * * * * * * * 1031 5569 5575 1517 4656 * * 5818 81 0 * * * * * * 5495 0 0 D 82 * * 1198 1302 5232 * * 5283 * * * * 4479 4618 * * * 5590 * * 82 0 * * * * * * 5491 0 0 K 83 5423 * * 3520 * * * * 1024 * * * 5617 5395 1745 6126 5232 6131 * * 83 0 * * * * * * 5491 0 0 R 84 * * * * * * 6131 4465 2029 * 4246 5828 * 3705 1023 * 4692 5807 * * 84 0 * * * * * * 5491 0 0 L 85 5807 * * * 1123 * 4280 5509 * 3255 * * * * * 5946 * * 3451 2077 85 0 * * * * * * 5491 0 0 W 86 5093 4611 * * * * 4972 * * * * 4927 * 5167 * 5395 3970 * 829 2421 86 0 * * * * * * 5491 0 0 W 87 5423 * * * 4653 * 3517 3752 5807 * * 5961 * * 2926 * 5539 * 1163 2818 87 0 * * * * * * 5491 0 0 L 88 6344 3444 * * * * * 2180 * 1472 * * * * * 4474 3052 3267 * 4465 88 0 * * * * * * 5491 0 0 K 89 5800 * * * * * * * 820 5328 4247 * * * 1991 * 5750 3883 * * 89 0 * * * * * * 5345 0 0 L 90 6022 3149 * * * * * 1758 * 1274 * * * * * 6175 * 2748 * * 90 0 * * * * * * 5345 0 0 T 91 6186 5036 3145 6123 6022 * 5619 5426 1889 5575 6352 4767 * 3765 2341 3254 4806 5790 * * 91 0 * * * * * * 5345 0 0 A 92 756 4409 * * * 3978 * 4841 * * * * * * * 6064 2992 3036 * * 92 0 * * * * * * 5345 0 0 L 93 * * * * 4003 * * * * 220 4935 * * * * * * * * 4439 93 0 * * * * * * 5099 0 0 A 94 540 4999 * * * * * * * * 4590 * * * * 2673 * 3597 * * 94 0 * * * * * * 4726 0 0 D 95 * * 2255 507 * * * * * * * * * 3524 * * * * * * 95 0 * * 0 * * * 4166 0 0 //