HHsearch 1.5 NAME c4bl6A_ FAM FILE c4bl6A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4bl6A_.a3m DATE Sat Jun 15 08:27:04 2013 LENG 82 match states, 82 columns in multiple alignment FILT 11 out of 15 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.0 EVD 0.4223 -0.6101 SEQ >ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC >sa_dssp EEEDEEDDEEEDDEDDEEDDDEDEEEDEEDEEEDEEDEDEDEDEEDEEEEDDDEEEEDEDEEECEDDEDEEEEDCCECEEEE >ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 9256899999999999999999999999999988999999999999998743788999999999999999999998764049 >Consensus xxxxetxxklrxeLKalKedaatFaSlRamFaaRcdEyvxQldexxxxlxaaEeEKkTlNxLLrxAIqQKlalTQRLEdxEx >c4bl6A_ IIVSDTXSKLRNELRLLKEDAATFSSLRAXFAARCEEYVTQVDDLNRQLEAAEEEKKTLNQLLRLAVQQKLALTQRLEEXEX >UniRef50_B7PH72(621-813:813) Putative uncharacterized protein (Fragment) n=1 Tax=Ixodes scapularis RepID=B7PH72_IXOSC E=4e-60 s/c=0.42 id=70% cov=101% AVVSETLSKQRHELKSLKEDAATFASLRAMFAARCEEYVAQLDDLQRQLAAVEDERKTLNSLLRMAIHQKLALTQRLEDMEM >UniRef50_UPI0000E47AE7(569-751:762) PREDICTED: similar to Bicaudal D homolog 1 (Drosophila) n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E47AE7 E=6e-54 s/c=0.43 id=69% cov=101% AIIAETMKKLRNELKALKEEAASFASLRAMFAKRCDEYVTQLDDMHRQLSSAEEEKKTLNSLLRMAIQQKLALTQRLEDLEF >UniRef50_A7RT63(378-587:588) Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7RT63_NEMVE E=8e-45 s/c=0.36 id=58% cov=101% AVQAESVAQLKRNLKAFKAEAATFASLRSMFAARCEEYVVQLDELQGKLMAAEEEKKTLNQLLKQAIHQKIALTQRLEEFEI >UniRef50_UPI000180B410(535-721:748) PREDICTED: similar to bicaudal D homolog 2 n=1 Tax=Ciona intestinalis RepID=UPI000180B410 E=2e-42 s/c=0.40 id=60% cov=101% LFVSETMLKLRGELKALKEDAVTFAQLRMMFAARCDEYVAQLDAMQRHLASAEEEKRTLNTLLRKTITQKLAITQRLEDLEF >UniRef50_UPI0000F2E75B(824-985:1138) PREDICTED: similar to MGC84972 protein n=1 Tax=Monodelphis domestica RepID=UPI0000F2E75B E=2e-42 s/c=0.44 id=70% cov=96% SVVSETMSKLRHELKVLKEDAATFSSLRAVFASRCDEYVLQLGEIQQQLAAAEEEKKTLKSLLSLAIQQKRALTQRLE---- >UniRef50_C4Q4U3(663-797:928) Bicaudal D-like protein n=2 Tax=Schistosoma mansoni RepID=C4Q4U3_SCHMA E=5e-40 s/c=0.54 id=64% cov=101% INVSSTMQQLRNELKTLKEDAAIYASLRAVFAQRYDEYMTQLDEMQRKLSVAEEEKRTANTLLRLAIQQKLAVTQRLEELEV >UniRef50_UPI0001923B40(292-498:499) PREDICTED: similar to predicted protein, partial n=1 Tax=Hydra magnipapillata RepID=UPI0001923B40 E=1e-51 s/c=0.50 id=46% cov=101% AIQNDVSNQLKRQIKALKSECQTFVSLRSMFATRCDEYIKQLEIKDQNIAAAENEKQTLNILLKQAIHQKICLTQRLEEYEI >UniRef50_A8WZT7(519-714:834) C. briggsae CBR-BICD-1 protein n=3 Tax=Caenorhabditis RepID=A8WZT7_CAEBR E=5e-43 s/c=0.51 id=61% cov=96% KMQMDITEKMRRELKQLKEDAATFASHRAMFTARGEELKAKAPELR----ANEEEKKTLNQLLRLAIQQKLSLTQRLEDVEV >UniRef50_A8Q020(520-695:728) Cytoskeleton-like bicaudal D protein homolog 2, putative n=1 Tax=Brugia malayi RepID=A8Q020_BRUMA E=6e-41 s/c=0.67 id=57% cov=101% AMTHELLERLRRELKAFKEDAATFASHRAMFTARCEELQAQVDEMAANQKAAEDEKRTLNSLLRMAIQQKLALTQRLEDLEV # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * I 1 902 * * * * * * 2495 3249 3333 * * * * * 3591 * * * * 1 0 * * * * * * 1963 0 0 I 2 * * * * 3333 * * 1817 * * 1946 3299 * * * * * 1967 * * 2 0 * * * * * * 1963 0 0 V 3 * * * * * * * 3793 * * * * * 1578 * * 3429 1000 * * 3 0 * * * * * * 1963 0 0 S 4 2591 * * * * * 3429 * * * 3249 2879 * * * 1189 4021 * * * 4 0 * * * * * * 1963 0 0 D 5 * * 1658 782 * * * * * * * * * * * 3299 * * * * 5 0 * * * * * * 1963 0 0 T 6 * * * * * * * 3249 * 3429 * * * * * 3414 805 2879 * * 6 0 * * * * * * 1963 0 0 X 7 * * * * * * * * * 2411 1136 * * * * 2811 3144 3305 * * 7 0 * * * * * * 1958 0 0 S 8 3414 * * 2336 * * * * 3793 3333 4021 2879 * 3299 * 2073 * * * * 8 0 * * * * * * 1963 0 0 K 9 * * * * * * * * 796 * * * * 1593 3429 * * * * * 9 0 * * * * * * 1963 0 0 L 10 * * * * * * * * * 293 3249 * * 3664 * * * * * * 10 0 * * * * * * 1963 0 0 R 11 * * * * * * * * 2122 * * * * * 377 * * * * * 11 0 * * * * * * 1963 0 0 N 12 * * * * * 3333 2627 * * * * 1684 * * 1225 * * * * * 12 0 * * * * * * 1963 0 0 E 13 * * * 377 * * * * * * * 3414 * 2879 * * * * * * 13 0 * * * * * * 1963 0 0 L 14 * * * * * * * 2879 * 211 * * * * * * * * * * 14 0 * * * * * * 1963 0 0 R 15 * * * * * * * * 114 * * * * * 3722 * * * * * 15 0 * * * * * * 1963 0 0 L 16 848 * * * * * * * * 3722 * * * 3249 * 3664 3299 3591 * * 16 0 * * * * * * 1963 0 0 L 17 * * * * 2422 * * * * 298 * * * * * * * * * * 17 0 * * * * * * 1963 0 0 K 18 * * * * * * * * 0 * * * * * * * * * * * 18 0 * * * * * * 1963 0 0 E 19 3414 * * 377 * * * * * * * * * * * 2879 * * * * 19 0 * * * * * * 1963 0 0 D 20 * * 518 1728 * * * * * * * * * * * * * * * * 20 0 * * * * * * 1963 0 0 A 21 211 2879 * * * * * * * * * * * * * * * * * * 21 0 * * * * * * 1963 0 0 A 22 387 * * * * * * * * * * * * 2879 * * * 3333 * * 22 0 * * * * * * 1963 0 0 T 23 * * * * * * * 3299 * * * * * * * 3793 275 * * * 23 0 * * * * * * 1963 0 0 F 24 * * * * 155 * * * * * * * * * * * * * * 3299 24 0 * * * * * * 1963 0 0 S 25 636 * * * * * * * * * * * * * * 2182 * 2879 * * 25 0 * * * * * * 1963 0 0 S 26 * * * * * * * * * * * * * 3333 * 151 * * * * 26 0 * * * * * * 1963 0 0 L 27 * * * * * * 2336 * * 318 * * * * * * * * * * 27 0 * * * * * * 1963 0 0 R 28 * * * * * * * * * * * * * * 0 * * * * * 28 0 * * * * * * 1963 0 0 A 29 576 * * * * * * * * * 3333 * * * * 2122 * * * * 29 0 * * * * * * 1963 0 0 X 30 * * * * * * * * * * 323 * * * * * * 2316 * * 30 0 * * * * * * 1958 0 0 F 31 * * * * 0 * * * * * * * * * * * * * * * 31 0 * * * * * * 1963 0 0 A 32 318 * * * * * * * * * * * * * * * 2336 * * * 32 0 * * * * * * 1963 0 0 A 33 874 * * * * * * * 3793 * * * * 3299 * 3591 2340 * * * 33 0 * * * * * * 1963 0 0 R 34 * * * * * * * * * * * * * * 0 * * * * * 34 0 * * * * * * 1963 0 0 C 35 * 334 * * * 3249 * * * * * * * * * * * * * 3299 35 0 * * * * * * 1963 0 0 E 36 * * 853 1163 * * * * * * * * * * * * * * * * 36 0 * * * * * * 1963 0 0 E 37 * * * 0 * * * * * * * * * * * * * * * * 37 0 * * * * * * 1963 0 0 Y 38 * * * * * * * * * 2336 * * * * * * * * * 318 38 0 * * * * * * 1963 0 0 V 39 * * * * * * * 2879 3249 * 3299 * * 3429 * * * 825 * * 39 0 * * * * * * 1963 0 0 T 40 1411 * * * * * * * 2879 3591 * * * * * * 1684 3414 * * 40 0 * * * * * * 1963 0 0 Q 41 * * * * * * * * 3249 * * * * 160 * * * * * * 41 0 * * * * * * 1963 0 0 V 42 3249 * * * * * * * * 462 * * * * * * * 2568 * * 42 0 * * * * * * 1963 0 0 D 43 * * 565 2879 * 3591 * * * * * * 3249 * * * * * * * 43 0 * * * * * * 1963 0 0 D 44 3333 * 2140 894 * * * 2879 * * * * * * * * * * * * 44 0 * * * * * * 1963 0 0 L 45 * * * * * * * 3591 2879 1499 1226 * * * * * * * * * 45 0 * * * * * * 1963 0 0 N 46 3429 * 2879 * * * 3793 * * * * 3722 * 949 3249 * * * * * 46 160 * 3249 * * * * 1963 0 0 R 47 3135 * * * * 3273 * * * * * * * 2062 880 * * * * * 47 0 * * * * * 0 1889 0 1000 Q 48 * * * * * * 3232 * 2218 * * 1931 * 1264 * * * * * * 48 0 * * * * * 0 1889 0 1000 L 49 * * * * * * * 2753 * 439 * * * 3135 * * * * * * 49 0 * * * * * 0 1889 0 1000 E 50 982 * * 3544 * * * * 3135 * 3273 * * * * 2390 * * * * 50 0 * * * * 0 * 1889 0 1000 A 51 460 * * * * * * * * * * * * * * 2545 * 3299 * * 51 0 * * * * * * 1963 0 0 A 52 293 * * * * * * * * * * 3249 * * * * * 3664 * * 52 0 * * * * * * 1963 0 0 E 53 * * * 0 * * * * * * * * * * * * * * * * 53 0 * * * * * * 1963 0 0 E 54 * * 2100 665 * * * * * * * 2879 * * * * * * * * 54 0 * * * * * * 1963 0 0 E 55 * * * 0 * * * * * * * * * * * * * * * * 55 0 * * * * * * 1963 0 0 K 56 * * * * * * * * 119 * * * * * 3664 * * * * * 56 0 * * * * * * 1963 0 0 K 57 * * * * * * * * 810 * * * * 2879 1768 * * * * * 57 0 * * * * * * 1963 0 0 T 58 * * * * * * * * * * * * * * * * 0 * * * 58 0 * * * * * * 1963 0 0 L 59 3299 * * * * * * * * 155 * * * * * * * * * * 59 0 * * * * * * 1963 0 0 N 60 * * * * * * * * 3591 * * 125 * * * * * * * * 60 0 * * * * * * 1963 0 0 Q 61 * * * * * * * 2879 * * * * * 1863 * 1364 2316 * * * 61 0 * * * * * * 1963 0 0 L 62 * * * * * * * * * 0 * * * * * * * * * * 62 0 * * * * * * 1963 0 0 L 63 * * * * * * * * * 0 * * * * * * * * * * 63 0 * * * * * * 1963 0 0 R 64 * * * * * * * * 2122 * * * * * 541 3591 * * * * 64 0 * * * * * * 1963 0 0 L 65 * * * * * * * * 3333 1452 1711 * * 2122 * * * * * * 65 0 * * * * * * 1963 0 0 A 66 151 * * * * * * * * * * * * * * * 3333 * * * 66 0 * * * * * * 1963 0 0 V 67 * * * * * * * 114 * * * * * * * * * 3722 * * 67 0 * * * * * * 1963 0 0 Q 68 * * * * * * 1696 * * * * * * 756 * * 3333 * * * 68 0 * * * * * * 1963 0 0 Q 69 * * * * * * * * * * * * * 0 * * * * * * 69 0 * * * * * * 1963 0 0 K 70 * * * * * * * * 0 * * * * * * * * * * * 70 0 * * * * * * 1963 0 0 L 71 * * * * * * * 2122 * 541 * * * * 3591 * * * * * 71 0 * * * * * * 1963 0 0 A 72 398 2879 * * * * * * * * * * * * * 3249 * * * * 72 0 * * * * * * 1963 0 0 L 73 * * * * * * * 3333 * 324 * * * * * * * 3299 * * 73 0 * * * * * * 1963 0 0 T 74 * * * * * * * * * * * * * * * * 0 * * * 74 0 * * * * * * 1963 0 0 Q 75 * * * * * * * * * * * * * 0 * * * * * * 75 0 * * * * * * 1963 0 0 R 76 * * * * * * * * * * * * * * 0 * * * * * 76 0 * * * * * * 1963 0 0 L 77 * * * * * * * * * 0 * * * * * * * * * * 77 0 * * * * * * 1963 0 0 E 78 * * * 0 * * * * * * * * * * * * * * * * 78 0 * * * * * * 1963 0 0 E 79 * * 850 1168 * * * * * * * * * * * * * * * * 79 0 * * * * * * 1944 0 0 X 80 * * * * 3175 * * * * 960 3345 * * * * * * 3030 * 2696 80 0 * * * * * * 1936 0 0 E 81 * * * 0 * * * * * * * * * * * * * * * * 81 0 * * * * * * 1944 0 0 X 82 * * * * 1823 * * 1916 * * 3345 * * * * * * 1499 * * 82 0 * * 0 * * * 1936 0 0 //