HHsearch 1.5 NAME c4b86I_ FAM FILE c4b86I_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4b86I_.a3m DATE Sat Feb 9 15:40:22 2013 LENG 35 match states, 35 columns in multiple alignment FILT 1 out of 5 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.0 EVD 0.5090 2.4619 SEQ >ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >sa_dssp EEEDDEEEEDEEEDEEEDEEEEDDEEDDEEEEEEE >ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >ss_conf 95678999999999999999999998768766509 >Consensus ssqaaclkqilllqldlieqqqqqlqakekeieel >c4b86I_ SSQAACLKQILLLQLDLIEQQQQQLQAKEKEIEEL # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 * * * * * * * * * * * * * * * 0 * * * * 1 0 * * * * * * 1000 0 0 S 2 * * * * * * * * * * * * * * * 0 * * * * 2 0 * * * * * * 1000 0 0 Q 3 * * * * * * * * * * * * * 0 * * * * * * 3 0 * * * * * * 1000 0 0 A 4 0 * * * * * * * * * * * * * * * * * * * 4 0 * * * * * * 1000 0 0 A 5 0 * * * * * * * * * * * * * * * * * * * 5 0 * * * * * * 1000 0 0 C 6 * 0 * * * * * * * * * * * * * * * * * * 6 0 * * * * * * 1000 0 0 L 7 * * * * * * * * * 0 * * * * * * * * * * 7 0 * * * * * * 1000 0 0 K 8 * * * * * * * * 0 * * * * * * * * * * * 8 0 * * * * * * 1000 0 0 Q 9 * * * * * * * * * * * * * 0 * * * * * * 9 0 * * * * * * 1000 0 0 I 10 * * * * * * * 0 * * * * * * * * * * * * 10 0 * * * * * * 1000 0 0 L 11 * * * * * * * * * 0 * * * * * * * * * * 11 0 * * * * * * 1000 0 0 L 12 * * * * * * * * * 0 * * * * * * * * * * 12 0 * * * * * * 1000 0 0 L 13 * * * * * * * * * 0 * * * * * * * * * * 13 0 * * * * * * 1000 0 0 Q 14 * * * * * * * * * * * * * 0 * * * * * * 14 0 * * * * * * 1000 0 0 L 15 * * * * * * * * * 0 * * * * * * * * * * 15 0 * * * * * * 1000 0 0 D 16 * * 0 * * * * * * * * * * * * * * * * * 16 0 * * * * * * 1000 0 0 L 17 * * * * * * * * * 0 * * * * * * * * * * 17 0 * * * * * * 1000 0 0 I 18 * * * * * * * 0 * * * * * * * * * * * * 18 0 * * * * * * 1000 0 0 E 19 * * * 0 * * * * * * * * * * * * * * * * 19 0 * * * * * * 1000 0 0 Q 20 * * * * * * * * * * * * * 0 * * * * * * 20 0 * * * * * * 1000 0 0 Q 21 * * * * * * * * * * * * * 0 * * * * * * 21 0 * * * * * * 1000 0 0 Q 22 * * * * * * * * * * * * * 0 * * * * * * 22 0 * * * * * * 1000 0 0 Q 23 * * * * * * * * * * * * * 0 * * * * * * 23 0 * * * * * * 1000 0 0 Q 24 * * * * * * * * * * * * * 0 * * * * * * 24 0 * * * * * * 1000 0 0 L 25 * * * * * * * * * 0 * * * * * * * * * * 25 0 * * * * * * 1000 0 0 Q 26 * * * * * * * * * * * * * 0 * * * * * * 26 0 * * * * * * 1000 0 0 A 27 0 * * * * * * * * * * * * * * * * * * * 27 0 * * * * * * 1000 0 0 K 28 * * * * * * * * 0 * * * * * * * * * * * 28 0 * * * * * * 1000 0 0 E 29 * * * 0 * * * * * * * * * * * * * * * * 29 0 * * * * * * 1000 0 0 K 30 * * * * * * * * 0 * * * * * * * * * * * 30 0 * * * * * * 1000 0 0 E 31 * * * 0 * * * * * * * * * * * * * * * * 31 0 * * * * * * 1000 0 0 I 32 * * * * * * * 0 * * * * * * * * * * * * 32 0 * * * * * * 1000 0 0 E 33 * * * 0 * * * * * * * * * * * * * * * * 33 0 * * * * * * 1000 0 0 E 34 * * * 0 * * * * * * * * * * * * * * * * 34 0 * * * * * * 1000 0 0 L 35 * * * * * * * * * 0 * * * * * * * * * * 35 0 * * 0 * * * 1000 0 0 //