HHsearch 1.5 NAME c4b86H_ FAM FILE c4b86H_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4b86H_.a3m DATE Sat Feb 9 15:36:24 2013 LENG 96 match states, 96 columns in multiple alignment FILT 23 out of 27 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.0 EVD 0.4013 -1.4062 SEQ >ss_dssp CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHTBCTTTCSBCSSEECCSSCSSCCCEEGGGTTCCCCCBCHHHHHHHHHHHHHHHHHHHHHCC >sa_dssp CDADEACDCCDDABECBEEEEDDDBDECCEEACECACBCCDDECBEDABADEEDEDCDBCADEBEEEEEEEECEDACEBBECCEEBCDDBEDDDEE >ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >ss_conf 964048899999999999723999998899999997989748764287788999973023343118102347889999999999999999607789 >Consensus mxxmnatslYvxxxrlxlxsxxxdlxxllpxLRqsLsCxVCxxLLxDPxxPxxxxCqHxVCrxCxGxkxxxENxxlxillxCYkxlCxxlxxsxlx >c4b86H_ MNPVNATALYISASRLVLNYAFTEINRLLPYFRQSLSCCVCGHLLQDPIAPTNSTCQHYVCKTCKGKKMMEENKQLSILVNCYKKLCEYITQTTLA >UniRef50_O76733(1-116:761) Male-specific lethal-2 n=2 Tax=Drosophila virilis RepID=O76733_DROVI E=2e-09 s/c=0.55 id=43% cov=97% ---MEAQKLYIKITRLSLKSAsnlskrrIQELNSGIGELRQLLSCAVCCQLLNDPYKPKDKRCGHHVCRLClRGRKRLlpscaqcndccdfktyEENKSM AMQLLCYKTLCVHLLQSSL- >UniRef50_A7USF8(2-112:426) AGAP000533-PA (Fragment) n=1 Tax=Anopheles gambiae RepID=A7USF8_ANOGA E=3e-25 s/c=1.05 id=46% cov=98% --TMNPTSLYITTSRLVFQgdivAGLQDLNRLLPYLRKSLSCAVCCKLLVEPHSPVTGDCQHHICRVCVGKHkklkpacrfckgllQYRENTQLRLLLQC YKSICTFIRTRPV- >UniRef50_UPI0001757DB7(1-112:376) PREDICTED: similar to MSL2 protein n=1 Tax=Tribolium castaneum RepID=UPI0001757DB7 E=9e-24 s/c=0.99 id=41% cov=97% ---MNSTSLYVTTNQIILKSnpsnptTWQDLYRLVPYLRNSLCCVVCGNLLVDPLTPTVGRCQHHLCRRCIGGRKkikpacawckdcsdYTDNKHLRILL QCYKKMCIALVKSGI- >UniRef50_UPI000180CE31(1-115:181) PREDICTED: similar to Male-specific lethal 2-like 1 (MSL2-like 1) (Male-specific lethal-2 homolog 1) (MSL-2) (RING finger protein 184) n=1 Tax=Ciona intestinalis RepID=UPI000180CE31 E=5e-23 s/c=0.94 id=43% cov=100% MDTENCTNLYLQVCQTFLTckyddpSTFEDLYKLLPWLRQSLTCCVCSKVVVDPMSSTQTHCQHFVCAKCRGGKMvlrpscswckdanaFEINEHLVILV QCFSKICELILHSPI- >UniRef50_B7QLX1(1-112:272) Putative uncharacterized protein (Fragment) n=1 Tax=Ixodes scapularis RepID=B7QLX1_IXOSC E=1e-18 s/c=0.84 id=47% cov=97% ---MNALSLYVTTCRRVFesdpndNSAWADIYRLLSLLRQALLCSVCSSLLVVPMTSTMPNCQHSVCKGCLGKKtrlkssclgcedhsKFAENLHLRILL QCYKKFCDYLGTSSL- >UniRef50_UPI000058889F(7-42:364) PREDICTED: similar to KIAA1585 protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI000058889F E=9e-06 s/c=1.42 id=51% cov=39% ------------------------------------------------------------CSWCKNYEKFAEVRQLRILLSCYKKLCEYIAATPIA >UniRef50_B4N486(4-113:634) GK11737 n=1 Tax=Drosophila willistoni RepID=B4N486_DROWI E=2e-20 s/c=0.91 id=41% cov=86% ---------YVTIVRLTIcsdnhmsQSCLIEINKSISELRRYLSCVVCCRLLTDPYEPKGPQCGHYVCRLCvRGDKRlvpecpicrncsgftnYEENRVV TLLLLCYKSICIYMM----- >UniRef50_A7SED6(1-110:327) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SED6_NEMVE E=2e-14 s/c=0.73 id=44% cov=95% ---MNATTLYVEACKCMLYfnsenpSKWDDLLQLLPRLRQSLSCRVCRGLVVDPFGS--QSCLHYVCRGCLRKKRalnpgcrwclnldkLVEDRQTKIVL ACYRKLCEFLTESTV- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 1795 0 0 N 2 * * 1881 * * * * * * * * 457 * * * * * * * * 2 0 * * * * * * 1795 0 0 P 3 * * * * * * * * * * * * 784 * * * 1254 * * * 3 0 * * * * * * 2040 0 0 V 4 * * * 3545 * * * * * * 512 * * * * * * 2230 * * 4 0 * * * * * * 2887 0 0 N 5 * * * 2803 * * * * * * * 521 * * * 4347 3175 * * * 5 0 * * * * * * 2887 0 0 A 6 385 3676 * * * * * * * * * * 3361 * * 4091 * * * * 6 0 * * * * * * 2958 0 0 T 7 * * * * * * * * * 4039 4681 * * 1702 * * 871 4437 * * 7 0 * * * * * * 2958 0 0 A 8 2677 * * * * * * * 3592 * * 3676 * * 4676 1307 2063 * * * 8 0 * * * * * * 2958 0 0 L 9 3458 * * * * * * * * 367 * * * * * * * 2907 * * 9 0 * * * * * * 2958 0 0 Y 10 * * * * * * * * * * * * * * * * * * * 0 10 0 * * * * * * 2980 0 0 I 11 4238 * * * * * * 2338 * 2776 * * * 4777 * 4211 4411 1102 * * 11 0 * * * * * * 2980 0 0 S 12 * * * 3879 * * * * 2066 * * * * 3158 4238 1862 1982 * * * 12 0 * * * * * * 2980 0 0 A 13 1955 * * * * * * 3123 * 3322 * * * * * * 1782 2080 * * 13 0 * * * * * * 2980 0 0 S 14 * 1384 * * * * * * * 3322 * 4130 * * * 2441 2862 2858 * * 14 0 * * * * * * 2980 0 0 R 15 * * 4238 * * 4211 * * 3879 4786 * * * 2912 716 4411 * * * * 15 0 * * * * * * 2980 0 0 L 16 4220 3879 * * * * * 3425 * 849 * * * * 4080 3393 3722 * * * 16 0 * * * * * * 2980 0 0 V 17 4796 * * * 3722 * * 3261 * 4090 3879 * * * * 2388 4397 1256 * * 17 0 * * * * * * 2980 0 0 L 18 * * * * 2084 * * 3467 * 1053 3548 * * * * * * 3235 * * 18 320 2328 * 2867 213 * * 3043 2048 0 N 19 * * * * * * * * 2269 * * 3386 * 1293 2719 * 3799 * * 3945 19 358 2186 * 3068 183 * * 3043 1956 0 Y 20 3652 2825 * * * * * * * * * * * 4276 * 649 4291 * * 4693 20 373 2502 4289 2585 263 * * 3043 1757 0 A 21 1463 4375 4113 * * 3361 * * 3827 * * * * * * 4763 1874 * * 4217 21 376 2125 * 2807 222 0 * 3009 1492 1000 F 22 * * * * 1986 * * 3117 * 2303 * * 3234 * * * * 3919 1958 * 22 0 * * * * * * 3043 0 0 T 23 2811 * 2450 3235 * * 4860 4455 4181 * * * * 2539 * 3282 2659 * * * 23 0 * * * * * * 3043 0 0 E 24 * * 572 1821 * * * * * * * * * 4502 * * * * * * 24 0 * * * * * * 3043 0 0 I 25 * * * * * * * 2185 * 571 4275 * 4181 * * * * * * * 25 0 * * * * * * 3043 0 0 N 26 * * * 4181 4479 * * 4291 * 3945 * 1522 * * * 2939 * * * 1711 26 82 4181 * 2585 263 * * 3043 1000 0 R 27 4850 * * * * * * 4502 2720 * * 4181 * 3945 1453 2336 3538 * * * 27 76 4289 * 3000 193 * * 3043 1000 0 L 28 4289 * 4502 * * 2211 * * * 766 * * * * * 4455 * 4181 * * 28 0 * * * * * * 3043 0 0 L 29 * * * * * * * 1881 * 753 * * * * * * * 2885 * * 29 0 * * * * * * 3043 0 0 P 30 4276 * * * * 2214 * * * * * * 771 * * 3285 * 4502 * * 30 0 * * * * * * 3043 0 0 Y 31 * * * 1486 2825 * * * * 4132 * * * * 3945 * * * 3799 1698 31 76 * 4291 * * * * 3043 0 0 F 32 * * * * 2397 * * * * 304 * * * * * * * * * * 32 0 * * * * 0 * 2980 0 1000 R 33 * * * * * * * * 4291 * * * * * 76 * * * * * 33 0 * * * * * * 3043 0 0 Q 34 * * 4181 * * * * 4291 3590 * * 4188 * 559 3693 * * * * * 34 0 * * * * * * 3043 0 0 S 35 4132 * * * * * * * * 1684 * * * * * 771 * * * 4455 35 0 * * * * * * 3043 0 0 L 36 * * * * * * * * * 76 * * * * * * * 4289 * * 36 0 * * * * * * 3043 0 0 S 37 3282 4188 * * * * * * * 4132 * * * * * 594 3024 * * * 37 0 * * * * * * 3043 0 0 C 38 * 76 * * * * * * * * * * * * * 4291 * * * * 38 0 * * * * * * 3043 0 0 C 39 2338 3178 * * * * * * * 2825 * * * * 3945 4132 3635 1522 * * 39 0 * * * * * * 3043 0 0 V 40 * * * * * * * 4291 * * * * * * * * * 76 * * 40 0 * * * * * * 3043 0 0 C 41 * 0 * * * * * * * * * * * * * * * * * * 41 0 * * * * * * 3043 0 0 G 42 * 1026 * * * 1839 * * * * * * * * 3945 2604 * * * * 42 0 * * * * * * 3043 0 0 H 43 * * * 4502 * 3945 4693 * 1983 * * 2153 4291 2944 2874 4132 * * * * 43 0 * * * * * * 3043 0 0 L 44 * * * * * * * * * 108 * * * * * * * 3799 * * 44 0 * * * * * * 3043 0 0 L 45 * * * * * * * * * 300 4291 * * * * * * 2870 * * 45 0 * * * * * * 3043 0 0 Q 46 * * * * * * * 4810 3490 4674 3594 3974 * 2475 * * 4455 1107 * * 46 0 * * * * * * 3043 0 0 D 47 * * 457 2220 * * * * * * * * * * * * * 4132 * * 47 0 * * * * * * 3043 0 0 P 48 * * * * * * * * * * * * 0 * * * * * * * 48 0 * * * * * * 3043 0 0 I 49 * * * * 2638 * 2558 3775 * 3185 2956 * * * * * * 4275 * 1708 49 0 * * * * * * 3043 0 0 A 50 2964 * * 3478 * 3101 * 4291 3974 * * * * * * 2099 2111 4850 * 4289 50 0 * * * * * * 3043 0 0 P 51 * * * * * * * * * * * * 311 * * 2367 * * * * 51 97 * 3945 * * * * 3043 0 0 T 52 4603 * * * * * * 3337 1556 * * 4170 * * * * 1259 4431 * * 52 0 * * * * * 0 2968 0 1000 N 53 * * 5011 2989 * 1713 4193 * 4257 * 4005 2858 * 3674 * 4351 4431 4132 * * 53 0 * * * * 0 * 2968 0 1000 S 54 * * * * * 3340 4289 4291 2461 4674 * * 2696 3945 3670 2531 3218 * * * 54 0 * * * * * * 3043 0 0 T 55 * * 2770 4275 * 4479 3231 * * * * 2923 * 3644 1837 3058 4693 * * * 55 0 * * * * * * 3043 0 0 C 56 * 0 * * * * * * * * * * * * * * * * * * 56 0 * * * * * * 3043 0 0 Q 57 * * 4289 4275 * 2705 4850 * * 3945 * * * 634 * * * * * * 57 0 * * * * * * 3043 0 0 H 58 * * * * * * 0 * * * * * * * * * * * * * 58 0 * * * * * * 3043 0 0 Y 59 * * * * 3024 * 1586 * * * * 3181 * * * 4132 * * * 1409 59 0 * * * * * * 3043 0 0 V 60 * * * * * * * 3388 * 4188 * * * * * * * 235 * * 60 66 4479 * 3807 107 * * 3043 1000 0 C 61 * 79 * * * * 4223 * * * * * * * * * * * * * 61 0 * * * * * * 3071 0 0 K 62 3853 * * * * * * * 2747 4259 * * * * 582 4020 * * * * 62 0 * * * * * * 3071 0 0 T 63 * * * * * 1523 * * 3732 1431 * * * * 4147 * 4638 4408 4006 * 63 0 * * * * * * 2989 0 0 C 64 * 0 * * * * * * * * * * * * * * * * * * 64 552 1654 * 0 * * * 2989 1737 0 K 65 * * * * * * * 4147 2009 3022 * * * * 1216 * * 2821 * * 65 0 * * * * * * 2989 0 0 G 66 * * 4562 * * 197 * * * * * 5650 * * 3932 * * * * * 66 55 4737 * 1000 1000 * * 2989 1000 0 K 67 * * 4409 4597 * 2436 * * 1347 * * * * 3503 2448 * * * * 4006 67 79 4236 * 4087 87 * * 2989 1000 0 K 68 * * * 3117 * * 4408 * 505 * * * * * 2911 * * * * * 68 228 2776 * 3807 107 * * 2989 1540 0 M 69 * * * * * * 4810 * 2900 4737 1935 3676 * 4408 1502 * 4236 * * * 69 714 1357 * 3832 105 * * 2989 2428 0 M 70 * * * * 1742 * * * 4737 1573 4638 * * * * * * * * 1799 70 455 1886 * 4000 93 * * 2989 1601 0 E 71 3689 * * 1187 * * * * 4236 * * * 4737 3503 4408 * 3340 2657 * * 71 55 4737 * 3585 126 * * 2989 1000 0 E 72 * * 4147 204 * * * 3732 * * * * * * * * * * * * 72 0 * * * * * * 2989 0 0 N 73 * * 3093 * * * * * * * * 213 * * * * * 5650 * * 73 0 * * * * * * 2989 0 0 K 74 * * * 3732 * * * * 1927 3323 * * * * 1198 * 3499 4737 * * 74 0 * * * * * * 2989 0 0 Q 75 3546 * * * * * 2401 * * 4791 4810 * 4236 1185 * 3692 4800 4409 * * 75 0 * * * * * * 2989 0 0 L 76 * * * * * * * 4236 * 827 1886 * * * * * 3932 4409 * * 76 0 * * * * * * 2989 0 0 S 77 2070 * * * * 4884 * * 3932 * * * * 4111 1726 2961 3339 3732 * * 77 0 * * * * * * 2989 0 0 I 78 4810 * * * * * * 1040 * 1659 3795 * * * * * 4236 4791 * * 78 0 * * * * * * 2989 0 0 L 79 * * * * * * * * * 605 * * * 1852 * * * 3932 * * 79 0 * * * * * * 2989 0 0 V 80 * * * * * * * 4111 * 437 * * * * * * * 2296 * * 80 0 * * * * * * 2989 0 0 N 81 3932 * 4111 * * * 3503 * * 1654 * 4638 * 1284 * 5650 * * * * 81 0 * * * * * * 2989 0 0 C 82 * 79 * * * * * * * * * * * * * 4235 * * * * 82 0 * * * * * * 2989 0 0 Y 83 * * * * 3732 * * * * * * * * * * * * * * 113 83 0 * * * * * * 2989 0 0 K 84 * * * * * * * * 599 * * * * 4236 2240 3732 * * * * 84 0 * * * * * * 2989 0 0 K 85 4236 * * * * * * * 1050 * * 4111 * * * 2884 1886 * * * 85 0 * * * * * * 2989 0 0 L 86 * * * * 4117 * * 2247 * 567 4147 * * * * * * * * * 86 0 * * * * * * 2989 0 0 C 87 * 0 * * * * * * * * * * * * * * * * * * 87 0 * * * * * * 2989 0 0 E 88 * * 4117 1397 * * * 2735 * 3503 * * * * * * 4408 1852 * * 88 0 * * * * * * 2989 0 0 Y 89 4147 4111 * * 3151 * 1879 * * 3732 * * * 4273 * * * * * 1418 89 0 * * * * * * 2989 0 0 I 90 * * * * 4562 * * 1687 * 1032 4409 * * * * * * 3171 * * 90 0 * * * * * * 2989 0 0 T 91 4183 * * * * 4117 * * 4597 1660 3484 * * * 3591 4111 2349 4147 * 4423 91 0 * * * * * * 2989 0 0 Q 92 5342 * * 3719 * 4225 2428 * 3967 * * 4446 * 1408 * * 2528 * * * 92 0 * * * * * * 2879 0 0 T 93 * * * * * * * * 4287 * * * * * 4105 477 2539 * * * 93 0 * * * * * * 2879 0 0 T 94 3544 * * 4225 * 3020 * * * * * 4446 1632 * * 2030 3012 * * * 94 0 * * * * * * 2879 0 0 L 95 * * * * * * * 2152 * 939 4366 * * * * * * 2287 * * 95 0 * * * * * * 2862 0 0 A 96 0 * * * * * * * * * * * * * * * * * * * 96 0 * * 0 * * * 1567 0 0 //