HHsearch 1.5 NAME c4a9zC_ FAM FILE c4a9zC_ COM /bmm/www/servers/phyre2/HH/hhmake -i c4a9zC_.a3m DATE Wed Jan 9 22:45:26 2013 LENG 58 match states, 58 columns in multiple alignment FILT 10 out of 14 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.0 EVD 0.4263 0.9032 SEQ >ss_dssp CCCCCCCCCCSHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHTCSCC >sa_dssp EEEEEEEEDEECEDDEEDCEDDDDEDEDEEDEEEDBDDEDEECCEDEEDDDDEEDEEE >ss_pred CCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC >ss_conf 9854999954624689999988889999607989999999999999999997563069 >Consensus ddevftLxVRGRexYEmLxKixesLeLxxxxpxxxiexYrxkqxrxxqxxxxxxxxxx >c4a9zC_ DDELLYLPVRGRETYEMLLKIKESLELMQYLPQHTIETYRQQQQQQHQHLLQKQTSIQ >UniRef50_Q4H2Z9(113-160:362) Transcription factor protein (Fragment) n=1 Tax=Ciona intestinalis RepID=Q4H2Z9_CIOIN E=3e-12 s/c=1.52 id=39% cov=84% DQEEFTLKIRGRDKFEMLKKIKEALDLAEVAAHQQVENYRDEDARTRQ---------- >UniRef50_Q1AMZ8(414-462:657) P63/73-like protein n=30 Tax=Mollusca RepID=Q1AMZ8_MYTED E=5e-12 s/c=1.48 id=48% cov=76% EDEPFTLSVRGRENYEILCRLRDSLELSSMVPQNQIDVYKQKQ--------------- >UniRef50_A8DPD6(375-415:492) Transcription factor p63 n=2 Tax=Nematostella vectensis RepID=A8DPD6_NEMVE E=2e-11 s/c=1.72 id=55% cov=72% DEEEFTITVRGRDNYEMLLKIKESLDLMNMVPQSVVDNYRK----------------- >UniRef50_D1LXA7(302-347:365) p63-like transcription factor n=2 Tax=Deuterostomia RepID=D1LXA7_SACKO E=1e-14 s/c=1.76 id=64% cov=81% DDDVYTLTVRGRENYEILLKIKESLELMSYIPQNTVNQYRAQQHRQ------------ >UniRef50_P79734(300-341:373) Cellular tumor antigen p53 n=14 Tax=Coelomata RepID=P53_DANRE E=3e-10 s/c=1.58 id=49% cov=74% DEEIFTLQVRGRERYEILKKLNDSLELSDVVPASDAEKYRQK---------------- >UniRef50_C0PUM1(314-354:383) Cellular tumor antigen p53 (Fragment) n=3 Tax=Euteleostei RepID=C0PUM1_SALSA E=3e-10 s/c=1.61 id=48% cov=72% -DNVFLLQVRGREHYEWLKKINDSLELMDHIPPAEQEKYKKK---------------- >UniRef50_B3RZS6(388-427:576) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RZS6_TRIAD E=3e-07 s/c=1.42 id=37% cov=71% NDDVFTITVRGRKNYEILAKMSESLEVLDKLSDAQINEIK------------------ >UniRef50_Q9W679(307-342:367) Cellular tumor antigen p53 n=10 Tax=Percomorpha RepID=P53_TETMU E=1e-06 s/c=1.51 id=41% cov=59% NNEVYTLQIRGRKRYEMLKKINDGLDLLENKPK------------------------- >UniRef50_P10360(307-335:367) Cellular tumor antigen p53 n=1 Tax=Gallus gallus RepID=P53_CHICK E=9e-06 s/c=1.77 id=57% cov=48% DNEIFYLQVRGRRRYEMLKEINEALQL------------------------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * D 1 * * 682 2961 * * * * * * * 2010 * * * * * * * * 1 0 * * * * * * 2003 0 0 D 2 * * 962 2625 * * * * * * * 2366 * 2939 * * * * * * 2 0 * * * * * * 2319 0 0 E 3 * * 2274 530 * * * * * * * 3312 * * * * * * * * 3 0 * * * * * * 2319 0 0 L 4 * * * 2229 * * * 2584 * 3383 * * 3181 * * * * 1273 * * 4 0 * * * * * * 2319 0 0 L 5 * * * * 469 * * * * 3383 * * * * * * * * * 2461 5 0 * * * * * * 2319 0 0 Y 6 * * * * * * * * * 3312 * * * * * * 482 * * 2447 6 0 * * * * * * 2319 0 0 L 7 * * * * * * * 2221 * 348 * * * * * * * * * * 7 0 * * * * * * 2319 0 0 P 8 * * * * * * * * 2939 * * * 3383 1419 * 3181 1788 * * * 8 0 * * * * * * 2319 0 0 V 9 * * * * * * * 2078 * * * * * * * * * 390 * * 9 0 * * * * * * 2319 0 0 R 10 * * * * * * * * * * * * * * 0 * * * * * 10 0 * * * * * * 2319 0 0 G 11 * * * * * 0 * * * * * * * * * * * * * * 11 0 * * * * * * 2319 0 0 R 12 * * * * * * * * * * * * * * 0 * * * * * 12 0 * * * * * * 2319 0 0 E 13 * * 2229 1117 * * * * 2071 * * * * * 3514 * * * * * 13 0 * * * * * * 2319 0 0 T 14 * * * * * * 3312 * 2939 * * 1323 * * 1872 * 3383 * * * 14 0 * * * * * * 2319 0 0 Y 15 * * * * 2939 * * * * * * * * * * * * * * 202 15 0 * * * * * * 2319 0 0 E 16 * * * 0 * * * * * * * * * * * * * * * * 16 0 * * * * * * 2319 0 0 M 17 * * * * * * * 1336 * * 991 * * * * * * * 3312 * 17 0 * * * * * * 2319 0 0 L 18 * * * * * * * * * 0 * * * * * * * * * * 18 0 * * * * * * 2319 0 0 L 19 2926 3181 * * * * * * 987 1978 * * * * * * * * * * 19 0 * * * * * * 2319 0 0 K 20 * * * 3514 * * * * 318 * * * * * 3181 * * * * * 20 0 * * * * * * 2319 0 0 I 21 * * * * * * * 559 * 2400 2926 * * * * * * * * * 21 0 * * * * * * 2319 0 0 K 22 * * * * * * * * 1380 * * 1419 * * 3181 2926 * * * * 22 0 * * * * * * 2319 0 0 E 23 * * 1334 729 * * * * * * * * * * * * * * * * 23 0 * * * * * * 2319 0 0 S 24 2198 * * * * 3232 * * * * * * * * * 566 * * * * 24 0 * * * * * * 2319 0 0 L 25 * * * * * * * * * 0 * * * * * * * * * * 25 0 * * * * * * 2319 0 0 E 26 * * 1645 755 * * * * * * * * * 3514 * * * * * * 26 0 * * * * * * 2319 0 0 L 27 * * * * * * * * * 203 * * * * * * * 2926 * * 27 0 * * * * * * 2319 0 0 M 28 2772 * * * * * * * * 1970 1345 * * * * 2288 * * * * 28 0 * * * * * * 2265 0 0 Q 29 * * 1561 1916 * * * * * * * 3442 * 3198 * 2358 * * * * 29 0 * * * * * * 2265 0 0 Y 30 * * * * * * 3171 * 2872 * 2283 3076 * * * * * 2073 * 2391 30 0 * * * * * * 2265 0 0 L 31 2772 * * * * * * 2376 3076 2026 * * * * * * * 1753 * * 31 0 * * * * * * 2265 0 0 P 32 2772 * * * * * * * * * * * 480 * * 2872 * * * * 32 0 * * * * * * 2265 0 0 Q 33 3453 * 2872 * * * 2772 * 3076 * * * 3171 1336 * * * * * * 33 0 * * * * * * 2265 0 0 H 34 1812 * * * * * 3096 * * * * 2191 * 2619 * 2208 * * * * 34 0 * * * * * * 2334 0 0 T 35 * * 3172 2982 * * * * * * * * * 1178 * * 2218 3245 * * 35 0 * * * * * * 2334 0 0 I 36 3172 * * * * * * 1336 * * * * * 2982 * * * 1449 * * 36 0 * * * * * * 2334 0 0 E 37 * * 2143 951 * * * * * * * 1964 * * * * * * * * 37 0 * * * * * * 2334 0 0 T 38 * * * 2660 * * * * 2074 * * 1898 * 3351 * * 3096 3048 * * 38 0 * * * * * * 2334 0 0 Y 39 * * * * * * * 2660 * * * * * * * * * * * 249 39 0 * * * * * * 2334 0 0 R 40 * * * * * * * * 1301 * * * * * 751 * * * * * 40 0 * * * * * * 2334 0 0 Q 41 2966 * 2425 * * * * * 1849 * * * * 1293 * * * * * * 41 0 * * * * * * 2184 0 0 Q 42 * * * 2169 * * * * 1074 * * * * 1725 * * * * * * 42 0 * * * * * * 2179 0 0 Q 43 * * 1744 * * * * * * * * * * 511 * * * * * * 43 0 * * * * * * 1921 0 0 Q 44 1408 * * * * * 1682 * * * * * * 1682 * * * * * * 44 0 * * * * * * 1707 0 0 Q 45 * * * * * * * * * * * * * 1682 539 * * * * * 45 0 * * * * * * 1707 0 0 Q 46 * * * * * * * * * * * * * 682 * * 1408 * * * 46 0 * * * * * * 1707 0 0 H 47 * * * * * * 1000 * * * * * * * 1000 * * * * * 47 0 * * * * * * 1520 0 0 Q 48 * * * * * * * * * * * * * 0 * * * * * * 48 0 * * * * * * 1520 0 0 H 49 * * * * * * 0 * * * * * * * * * * * * * 49 0 * * * * * * 1000 0 0 L 50 * * * * * * * * * 0 * * * * * * * * * * 50 0 * * * * * * 1000 0 0 L 51 * * * * * * * * * 0 * * * * * * * * * * 51 0 * * * * * * 1000 0 0 Q 52 * * * * * * * * * * * * * 0 * * * * * * 52 0 * * * * * * 1000 0 0 K 53 * * * * * * * * 0 * * * * * * * * * * * 53 0 * * * * * * 1000 0 0 Q 54 * * * * * * * * * * * * * 0 * * * * * * 54 0 * * * * * * 1000 0 0 T 55 * * * * * * * * * * * * * * * * 0 * * * 55 0 * * * * * * 1000 0 0 S 56 * * * * * * * * * * * * * * * 0 * * * * 56 0 * * * * * * 1000 0 0 I 57 * * * * * * * 0 * * * * * * * * * * * * 57 0 * * * * * * 1000 0 0 Q 58 * * * * * * * * * * * * * 0 * * * * * * 58 0 * * 0 * * * 1000 0 0 //