HHsearch 1.5 NAME c3zibD_ FAM FILE c3zibD_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3zibD_.a3m DATE Sat Jun 22 08:24:21 2013 LENG 96 match states, 96 columns in multiple alignment FILT 19 out of 23 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.7 EVD 0.4300 0.3452 SEQ >ss_dssp CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTCCCSSSCHHHHHHHHHHHHHHHHSCCCCTTCCCCHHHHHHHHHTCHHHHHHHHHHTTCC >sa_dssp EDDCCDCACCBADBAABBDCDEDEECDEEBCDCBEECCDEEDBCEDABECACDCADEBCEDECEDEEEEDDBDCBADDACEBEEACDBAEECDEEE >ss_pred CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCC >ss_conf 987899999999999999531625677899999999987303873355899999999951204787854446999999860887999999851897 >Consensus tysqxxxxKnxaLsxClaxxyxxxxxxxDAxsaaxayxexgxxxxEaxxxixaLxxkxlxxxYxxxxgxxxxxlKCidlxHSxELdalxxkxxxxx >c3zibD_ TYTPEEYLKNYALSVCIAEGYSAKEVKNDAAAAARGYTEFGDYSLEAHTAVRALAKEFLAKPYDSMSGEPMTMAKCIDLVHSQELQAIIKKYQGKD >UniRef50_B5BDU9(34-123:127) Putative periplasmic protein n=17 Tax=Salmonella enterica subsp. enterica RepID=B5BDU9_SALPK E=1e-11 s/c=0.79 id=43% cov=94% -YSQSELLKNWALSHCLALVYKDDVVKNDARATASAYLEYGKQSVEIYHEIDEIAKKYSGLKYNgSISSDFNTM-KCIDFIHDRELNELIKR----- >UniRef50_A3RXW5(37-101:115) Putative uncharacterized protein n=1 Tax=Ralstonia solanacearum UW551 RepID=A3RXW5_RALSO E=6e-06 s/c=0.80 id=33% cov=62% TYAQND--KDTVLATCIANAYRsDKDAAEDAGSSVSALRGWTRYNMEkSPDAVRSLADRYLAR----------------------------------- >UniRef50_C9Y425(30-123:132) Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y425_CROTZ E=2e-20 s/c=1.06 id=21% cov=99% -FTQPQIFTEWVQNRCMGYIADSAALKEDANASAAAWLEASELPVEAFNEADTLITQALKTPAGGTAKSDYRVLKCSLIAHSPEIAALYQQFAGR- >UniRef50_B1JPV7(85-174:178) Putative uncharacterized protein n=292 Tax=Yersinia RepID=B1JPV7_YERPY E=2e-19 s/c=1.07 id=46% cov=94% ---QKNNLENFALSICLEEGFPDGEINSEAFSAVGAYVELGAYPVEAYEEVSELAKKFLEKKYISKNGEsKLTVMKCIDLSQSSELSAIKDKY---- >UniRef50_Q87X43(4-100:114) Putative uncharacterized protein n=1 Tax=Pseudomonas syringae pv. tomato RepID=Q87X43_PSESM E=6e-18 s/c=0.95 id=30% cov=94% --SYAQNYKDLVLANCIANAYAYDvKIGIDAGSSVSAMEDWANYDWKVgPDEIQALVKKYLARDYTNpltesqIKGVKFDLLKCLDLYHSKELDALTKK- ---- >UniRef50_B0VVE4(34-120:129) Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii SDF RepID=B0VVE4_ACIBS E=1e-14 s/c=0.93 id=24% cov=85% -------IKNFGFSYCLTKT-KEKELLSEASLAMGGYFQEGNYEEPAYKNIKTFIDKQISKNYNVYKGTGNSaiLMNCLSMYNSPEYNKLI------- >UniRef50_C9Y421(32-124:142) Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y421_CROTZ E=4e-06 s/c=0.56 id=28% cov=83% -----QVVKDMVLARCIAQVSEPGSAfSRDAAHTANALRVWIPFDIENGDkKINALIKQF--KDTVNPSHSEYDqkstglTLNCLRLYHSPELD------ ---- >UniRef50_B1YNX6(45-136:139) Putative uncharacterized protein n=1 Tax=Burkholderia ambifaria MC40-6 RepID=B1YNX6_BURA4 E=1e-25 s/c=1.27 id=40% cov=95% -YSQKTLLKNWALSVCLAQVAHSVRDRDDANAAASAYLEFGRQPIEAYDALRALAQRYANRTYSGSMPASFNTMKCIDLFHSRELDTLVGR----- >UniRef50_Q2F9V5(26-120:121) Putative uncharacterized protein n=1 Tax=Vibrio sp. DAT722 RepID=Q2F9V5_9VIBR E=3e-22 s/c=1.11 id=32% cov=100% TQSDEQLFKNFALSSCIATYYKDSDVAKDAITAMQGYREFSELPLESFFEVSELLDTDDMSRYKSKNGNVIELAYCVDFSNSDGVHKLYIKAKSE- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * T 1 * * * * * * * * * * * * * * * * 0 * * * 1 0 * * * * * * 2042 0 0 Y 2 * * * * 2535 * * * * * * * * 2733 * * * * * 563 2 0 * * * * * * 2943 0 0 T 3 3853 * * * * * * * * * * * * * * 523 2091 * * * 3 0 * * * * * * 3142 0 0 P 4 * * 3044 * * * * * * * * * 2900 650 * * * * * 3216 4 0 * * * * * * 3262 0 0 E 5 3589 * * 1653 * * * * 1755 * * 4300 2837 * * 3159 * * * * 5 0 * * * * * * 3321 0 0 E 6 * * 4394 2192 * * * * 3911 * * 3603 * 1310 * * 2461 * * * 6 70 * 4394 * * * * 3503 0 0 Y 7 * * * * * * * 2936 * 1263 * 2071 * * * * * 3391 * 3066 7 0 * * * * * 0 3457 0 1000 L 8 * * * * 1874 * * 3211 * 1224 * * * * * * * 3666 * 3154 8 0 * * * * 0 * 3751 0 1000 K 9 * * * 3884 * * * * 360 * * * * * 4407 * 3235 * * * 9 0 * * * * * * 3807 0 0 N 10 * * 1719 3235 * * * * * * * 761 * * * * * * * * 10 0 * * * * * * 3807 0 0 Y 11 * * * * 1930 * * * * 4238 2189 * * * * * 4994 * 1563 3392 11 0 * * * * * * 3807 0 0 A 12 923 * * * * 3243 * * * * * * * * * * * 1446 * * 12 0 * * * * * * 3807 0 0 L 13 * * * * 3243 * * * * 343 * * * 3235 * * * * * * 13 0 * * * * * * 3807 0 0 S 14 1719 * * * * * * * * * * 3235 * * * 761 * * * * 14 0 * * * * * * 3807 0 0 V 15 * * * 3256 * * 3572 2841 * * * 4238 * * 2490 3489 3042 3004 * 3243 15 0 * * * * * * 3807 0 0 C 16 * 0 * * * * * * * * * * * * * * * * * * 16 0 * * * * * * 3807 0 0 I 17 * * * * * * * 1572 * 1114 3235 * * * * * * 3388 * * 17 0 * * * * * * 3807 0 0 A 18 562 * * 3884 * 3235 * * * * * * * * * * 2751 * * * 18 0 * * * * * * 3807 0 0 E 19 * * * 3109 * * * * 3243 3572 * 3567 * 1904 * * 2079 * * 3235 19 0 * * * * * * 3807 0 0 G 20 2108 * * * * 2617 * 3235 * * * * * * * * 3243 1717 * 3489 20 161 * 3243 * * * * 3807 0 0 Y 21 1823 * * * 3691 * * * * * * * * * * 3621 * * * 840 21 0 * * * * 0 * 3534 0 1000 S 22 4238 * 3235 3800 * * 3709 * 1404 * * * 3884 3072 3648 4376 * * * * 22 46 4994 * 0 * * * 3807 1000 0 A 23 4376 * 1349 3243 * * * * * * * * 3800 4152 * 2122 * * * 3383 23 0 * * * * * * 3807 0 0 K 24 2622 * 2474 3800 * 2841 * * 2106 * * * * 4369 * 3489 * 3709 * * 24 225 2793 * 0 * * * 3807 1419 0 E 25 3235 * 3053 1896 * * * * 4238 * * 4543 4152 * 2754 3057 * 3572 * * 25 84 4152 * 0 * * * 3807 1000 0 V 26 2267 * 3709 * * * * 3050 * 2239 * * * * * * 3800 1683 * * 26 107 3800 * 0 * * * 3807 1000 0 K 27 2055 * * * * 3383 * * 1808 3243 * 3884 * * 3709 2965 * * * * 27 0 * * * * * * 3807 0 0 N 28 * * 3709 2862 * * * 3383 2782 * 4369 2479 * * 2800 2528 * * * * 28 0 * * * * * * 3807 0 0 D 29 * * 275 2528 * * * * * * * * * * * * * * * * 29 0 * * * * * * 3807 0 0 A 30 84 * * * * * * 4152 * * * * * * * * * * * * 30 0 * * * * * * 3807 0 0 A 31 2581 * * * 3884 1719 * 3489 * * * 2453 * * 3572 3243 * * * * 31 0 * * * * * * 3807 0 0 A 32 1466 * * * * * 3800 * * 3243 * * * * * 1429 3489 * * * 32 0 * * * * * * 3807 0 0 A 33 1204 * * * * * * * * * * * * * * 1564 2135 * * * 33 0 * * * * * * 3807 0 0 A 34 852 * * * * * * 4152 * * 2360 * * * * * * 2358 * * 34 0 * * * * * * 3807 0 0 R 35 3235 * * * * 2028 * * * * * 3800 * 3489 3392 1349 * * * * 35 0 * * * * * * 3807 0 0 G 36 494 * * * * 1786 * * * * * * * * * * * * * * 36 0 * * * * * * 3807 0 0 Y 37 * * * * * * * * * 1996 4238 * * * * * * * 3235 761 37 0 * * * * * * 3807 0 0 T 38 * * * 4238 3243 * * * * 1375 4369 * * * 1779 * 4376 3884 * * 38 0 * * * * * * 3807 0 0 E 39 * * 2318 760 * 4994 * * * * * * * 3243 * * * 3800 * * 39 0 * * * * * * 3807 0 0 F 40 3235 * * 3243 1588 * * * * 3884 * * * * * * * * 1719 3572 40 0 * * * * * * 3807 0 0 G 41 4238 * * * * 997 * 3800 * * * * * * * 2356 2483 * * * 41 0 * * * * * * 3807 0 0 D 42 3884 * 3392 2356 * * * * 3572 * * 2656 3800 3800 3213 * * * * 2761 42 0 * * * * * * 3807 0 0 Y 43 * * * * 3057 * * * * 2356 * * * 2106 * * * * * 1145 43 0 * * * * * * 3807 0 0 S 44 * * 1539 3243 * * * * * * * 4994 1559 * * 2479 * * * * 44 0 * * * * * * 3807 0 0 L 45 * * * 3243 * * * 2754 * 1715 2937 * * * * * * 1954 4238 * 45 0 * * * * * * 3807 0 0 E 46 3800 * * 378 * * * * 4238 * * * 3243 * * * * * * * 46 284 2483 * 0 * * * 3807 1606 0 A 47 978 * * * * * * 3572 * * * 3057 * * * 2614 * 3003 * * 47 79 4238 * 0 * * * 3807 1000 0 H 48 * * * * 2356 3800 3392 * * * * * 2446 * * 4369 * * * 1301 48 0 * * * * * * 3807 0 0 T 49 * * 1290 3884 3489 * 3572 * 3243 4543 * 3235 * * * * 3392 * * * 49 107 3800 * 0 * * * 3807 1000 0 A 50 1700 * 3820 1339 * * * * 3861 * * 3289 * * * * * 4186 * * 50 0 * * * * * * 3808 0 0 V 51 3250 * * * * 4396 * 1472 * 2784 * * * * * * * 1549 * * 51 0 * * * * * * 3808 0 0 R 52 * * 2408 5607 * * 4186 4427 2397 * * 3861 * 4291 2158 2682 * * * * 52 0 * * * * * * 3808 0 0 A 53 1294 * * 1808 * * * * * * * * * * 5607 3671 2269 * * * 53 0 * * * * * * 3808 0 0 L 54 * * * * 3289 * * 3585 * 296 * * * * * * * * * * 54 0 * * * * * * 3808 0 0 A 55 1623 * * * * 4427 * 1856 * 3501 * * * * * * * 1920 * * 55 0 * * * * * * 3808 0 0 K 56 2991 * 2173 4047 * * * * 1454 * * 4396 * 3750 * * 3250 * * * 56 0 * * * * * * 3808 0 0 E 57 * * * 4384 * * * * 1089 * * * * 2524 2528 * 2891 * * * 57 0 * * * * * * 3808 0 0 F 58 3250 * 3501 * 1846 * * * * * * * * 3289 * * * * * 1231 58 103 * 3861 * * * * 3808 0 0 L 59 3629 * 3466 * * * * 3222 * 847 * * * * * 3519 * 3674 * * 59 0 * * * * * 0 3702 0 1000 A 60 1234 * * 3802 * 3519 * * 3156 * 3466 3629 * * 5305 3222 * * * * 60 0 * * * * 0 * 3702 0 1000 K 61 * * * * * * * * 1586 2697 * * * * 1647 3501 3250 * * * 61 0 * * * * * * 3808 0 0 P 62 * * 1726 * * * * * 2135 * * 3288 2710 * 3476 * 3001 * * * 62 0 * * * * * * 3795 0 0 Y 63 3262 * * * * * * * * * * * * * * * 3872 * * 273 63 110 3767 * 0 * * * 3795 1293 0 D 64 * * 4363 * * 1801 * 3859 3476 * * 2420 * * 3142 4618 3371 3872 * * 64 61 4591 * 0 * * * 3795 1000 0 S 65 * * * * * 2145 * * * * * 2042 * * * 1222 * 3288 * * 65 385 2095 * 2485 284 * * 3795 1656 0 M 66 * * * * * * * 2381 2655 * 3541 * 3872 4415 * 3036 3262 3387 * 2983 66 0 * * * * * * 3795 0 0 S 67 2413 * * * * * * 4540 1984 * 4618 2655 3767 * * 2284 * 4711 * * 67 0 * * * * * * 3795 0 0 G 68 4745 * 4072 * * 913 3872 * 3262 * * * 3664 * * 3051 * * * * 68 0 * * * * * * 3795 0 0 E 69 3947 * 4591 2318 * * * 4537 * * * 3476 * * * 1781 3288 2584 * * 69 103 3859 * 0 * * * 3795 1000 0 P 70 * * 2764 2937 3121 3288 * * 2152 * * * 3388 * 4216 4618 * 3476 * * 70 0 * * * * * * 3795 0 0 M 71 * * * * 1491 * * 3476 * 3859 3388 2202 * * * * * * * 2535 71 0 * * * * * * 3795 0 0 T 72 5375 * 1846 3476 * * * * * * * 3036 * * 3262 3288 1840 * * * 72 270 2551 * 1875 459 * * 3795 1719 0 M 73 * * * * 3142 * * * * 1475 2612 * * * * * 2395 2530 * * 73 176 * 3121 * * * * 3795 0 0 A 74 2300 * * * * * * * * 1214 1451 * * * * * * * * * 74 0 * * * * 0 * 3791 0 1588 K 75 * * * * * * * * 435 * * 2551 * * * * * * * 3476 75 0 * * * * * * 3795 0 0 C 76 * 0 * * * * * * * * * * * * * * * * * * 76 0 * * * * * * 3795 0 0 I 77 * * * * * * * 1317 * 1534 * * * * * 3262 * 2744 * * 77 0 * * * * * * 3795 0 0 D 78 * * 464 * * * * * * 3262 * * * * 3872 3288 * * * * 78 0 * * * * * * 3795 0 0 L 79 * * * * 2176 * * 3262 * 918 2782 * * * * * * * * * 79 0 * * * * * * 3795 0 0 V 80 3262 * * * 2715 * * 3565 * * * * * * * 2655 * 3388 * 1305 80 0 * * * * * * 3795 0 0 H 81 * * * * * * 437 * * * * 2379 * 3859 * * * * * * 81 0 * * * * * * 3795 0 0 S 82 * * 3565 * * 4072 * * * * * * * * * 224 * * * * 82 0 * * * * * * 3795 0 0 Q 83 * * 3476 * * * * * 1815 * * * 1532 4363 2622 3859 * * * * 83 0 * * * * * * 3795 0 0 E 84 * * * 136 * 3476 * * * * * * * * * * * * * * 84 0 * * * * * * 3795 0 0 L 85 * * * * * * * 3262 * 507 * * * * * * * 3476 * 3288 85 0 * * * * * * 3795 0 0 Q 86 2726 * 1137 * * * 3476 * * * * 2420 * 4363 * 3859 * * * * 86 0 * * * * * * 3795 0 0 A 87 944 * * 3114 * * * * 2323 * * * * * 3627 * 3573 * * * 87 0 * * * * * * 3694 0 0 I 88 3921 * * * * * 5193 2282 * 644 * * * 4030 * * * * * * 88 0 * * * * * * 3694 0 0 I 89 2974 * * * * * * 1755 3770 * * * * * * * 2435 3167 * 2273 89 0 * * * * * * 3694 0 0 K 90 * * 3589 * * 3439 * 3195 1276 * * * * 2451 5039 3483 * * * * 90 0 * * * * * * 3442 0 0 K 91 * * * * * * * * 1128 * * * * 2329 1542 * * * * * 91 0 * * * * * * 3442 0 0 Y 92 2393 * * * 1571 * * * * * * * * * * * * * * 1080 92 0 * * * * * * 3046 0 0 Q 93 1676 * * * * * * * 1073 * * * * 2239 * * * * * * 93 0 * * * * * * 2258 0 0 G 94 * * * * * 930 * * * * * 2339 * * * 1850 * * * * 94 0 * * * * * * 2258 0 0 K 95 * * * 1850 * * * * 2239 * * * * 2339 1676 * * * * * 95 0 * * * * * * 2258 0 0 D 96 * * 1000 * * * * * * * * * 1000 * * * * * * * 96 0 * * 0 * * * 1207 0 0 //