HHsearch 1.5 NAME c3zeyQ_ FAM FILE c3zeyQ_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3zeyQ_.a3m DATE Sat Feb 16 10:01:38 2013 LENG 104 match states, 104 columns in multiple alignment FILT 104 out of 163 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.5 EVD 0.4142 -0.6156 SEQ >ss_dssp CCCEEEEEEEEESSHHHHHHHHHHHHHHHTTTTCEEEEEECCCCEEEEEEEECCCCSSSCCCEEEEEEEEEEEEEEEEECHHHHHHHTCCCCCSSEEEEE ECCC >sa_dssp EEDBCACBDBCAECCECACEBBDDCCDDBDEEEBECDEDDDEEDEDEEDEDEDDECEEDEEDEDEEECDCCCBBBBBDACDECCEEBDECEDEEDBECCD DECE >ss_pred CCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEEEEEECCHHHHHHHHCCCCCCCEEEEE EEEC >ss_conf 9518999999982889999999999999986198323232589640378875316776520011478899999999957978999983368869808999 9619 >Consensus xexxkixIxlxsxdxxxLexxxxxixxxaxxxxixvxgpxxLPtkxxxxtvlrsPxxxgkksxxqfexrxhkRxixixxxxxxxxxixxxxlPxgVxixv xixx >c3zeyQ_ QETQRVLVKMTSRNAKAVENVMTELLLHARNEKVVLRGPVRLPTRTLKVTTRKTPCGNGTNTWDTYELKIYKRLVELRAPTELVKKITSFPIDAGVDVAI TIPH >UniRef50_D2RQ10(6-101:111) Ribosomal protein S10 n=3 Tax=Halobacteriaceae RepID=D2RQ10_9EURY E=6e-12 s/c=0.75 id=14% cov=93% ------RLTLQSGDRAALDAIVDDIKSTAERKGAALKGPHSHPPQKHSVPQHCRLHADDERRFSSWSYTVFTRELEIHGHDNLARNIASQNFPDSVHIEA EV-- >UniRef50_P46742(1-105:107) Ribosomal protein S10, mitochondrial n=1 Tax=Prototheca wickerhamii RepID=RT10_PROWI E=1e-11 s/c=0.68 id=19% cov=97% ---QQVQLKLKSFDPVYINQLISLLNDVLDTLEIQNSKEIFLPSKIKKITVIRSPHIH-KKSRDQFQIKRYKRSMIISfTNIDILHAFLEICKDlhvVGV QIHISVKY >UniRef50_Q74MI5(4-102:109) 30S ribosomal protein S10P n=1 Tax=Nanoarchaeum equitans RepID=RS10_NANEQ E=4e-15 s/c=0.83 id=23% cov=93% -----LRIKIYSTDLEELNRVVEKIKEIVKQTGVKMRGPIPLPTKILRVPVLRITGHRGTKIWDTYQMRIHRRIIDIATDDRTIKLLMRTPLitkPEKIQ IQLK--- >UniRef50_UPI0001926F28(70-172:191) PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata RepID=UPI0001926F28 E=6e-05 s/c=0.47 id=18% cov=71% ----KVLLTISSTDEAILQTYANYVTKAAKIVDVKVSKSFSMPAIPETVKAKILSEDNSNQKQVEYAFKNYRRIIEV----------------------- ---- >UniRef50_A9VB28(97-201:347) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9VB28_MONBE E=4e-23 s/c=1.04 id=18% cov=98% -QYRTCSIRMEGYNHAVLDSYVTFLERAARELGISCTGRIPLPTHKRRETVLKSPHV-YKQHRVQFDIATHARLFQMrnlsHSTLNTYLTYVQHHLPPGV ATRVKLP- >UniRef50_UPI000194BA1A(87-187:212) PREDICTED: mitochondrial ribosomal protein L48 n=1 Tax=Taeniopygia guttata RepID=UPI000194BA1A E=1e-05 s/c=0.51 id=21% cov=68% -----INIQMTSYDLCLVEHFAQYVHRLCNRLSIQVNESYAMPTRTNEVLFL---EEKGSKMQLDAVLTTHQRVVQIR---------------------- ---- >UniRef50_C4VAZ0(17-117:119) Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4VAZ0_NOSCE E=3e-08 s/c=0.59 id=25% cov=97% -EMMKVHIDLSTIKKNAISNACEKFEAFAGNFINDIKKET-LPKQTGIVPTLKTPCGQGTKTWAKYKIIVHQVRYVITSSHDQLEKVIQFlKNFPDIDIN MGI-- >UniRef50_Q2S4M9(137-233:238) Ribosomal protein S10p/S20e, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S4M9_SALRD E=2e-10 s/c=0.69 id=18% cov=92% -----LQIRLSSTDHQMVDRAVRQITQFVSDRQPRAPVAVPLPVGKKAAADERQGRTNGPPSRDEsFSQHIHHRAIEMwTAGPKLVAQLGQVQLPEAVDV TV---- >UniRef50_O44159(47-147:186) Putative uncharacterized protein n=2 Tax=Caenorhabditis RepID=O44159_CAEEL E=7e-09 s/c=0.61 id=18% cov=94% -EYNTINVRIQGHDFGSLEKYQAYIHKTAKRFGFTVVDSYAVAAQTQKAITYK---PYSTVSESEIDMSTYDRVVRLSDVAaprfSLFSQIIRAHIPIGV TMTVK--- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * Q 1 * * * * * * * * 1622 * * * * 567 * * * * * * 1 0 * * * * * * 2843 0 0 E 2 * * * 741 * * * * 4445 * * * * 1901 3509 * * * * * 2 0 * * * * * * 4797 0 0 T 3 * * * * 4962 * * 2382 * 4597 3968 2669 * 5071 * * 2363 3223 * 2455 3 0 * * * * * * 5228 0 0 Q 4 * * * 3627 * * 3559 * 2359 * 3734 4702 * 1929 2946 * 3413 * * 4662 4 0 * * * * * * 5783 0 0 R 5 5471 6423 6135 5044 * * 5121 * 1188 * * 6404 * 5032 3332 3763 2397 4906 * 6034 5 0 * * * * * * 5971 0 0 V 6 3352 5388 * * * * * 1247 * 2052 5067 * * * * * * 2561 * 5930 6 0 * * * * * * 6290 0 0 L 7 5154 5739 5814 5322 * * 5041 * 3605 4222 * 2955 * 3554 1364 4348 4126 5353 * 6526 7 0 * * * * * * 6485 0 0 V 8 * * * * 5830 * * 815 * 2195 6215 * * * * * * 2456 * * 8 0 * * * * * * 6614 0 0 K 9 * * 3978 5303 * * 4817 4452 1960 5080 6471 4802 * 3540 2926 5062 2228 4818 * * 9 0 * * * * * * 6617 0 0 M 10 * * * * 5481 * * 1821 * 1032 3863 * * * * * * 2867 * * 10 0 * * * * * * 6613 0 0 T 11 5912 * * 3703 6585 * 7022 * 1647 6589 * 6556 * 4155 3175 2794 2826 4724 7206 4275 11 0 * * * * * * 6613 0 0 S 12 3411 6937 * * * 2032 * * * * * * 6301 * * 706 5171 * * * 12 0 * * * * * * 6555 0 0 R 13 * * 6301 * 2138 4303 3050 5171 4792 5161 * 4952 * 5803 5155 5035 2907 6957 * 2019 13 16 6464 * 0 * * * 6555 1000 0 N 14 * * 1066 2822 5022 * 4655 * 3930 * * 2793 * * * 3689 * * 6925 6073 14 0 * * * * * * 6555 0 0 A 15 3255 6831 * 4763 3664 * 3012 * 3701 3054 5130 6524 3277 * 3943 4094 6767 3192 * 3950 15 0 * * * * * * 6560 0 0 K 16 2930 6307 4434 3349 5512 4964 5364 4923 2828 * 5502 4567 3484 3590 3463 4644 4658 5130 * 5369 16 0 * * * * * * 6560 0 0 A 17 3216 * 5081 6656 5997 5895 4848 3737 4153 2140 5354 4629 5458 4097 * 3734 4223 2825 * 6402 17 16 6513 * 1000 1000 * * 6560 1000 0 V 18 5124 * * * * * * 2649 * 618 6806 * * * * * * 2723 * * 18 0 * * * * * * 6560 0 0 E 19 6986 * 2014 1368 * * 6947 * 3628 * * 3075 * 3666 5989 4188 * * * * 19 0 * * * * * * 6560 0 0 N 20 3951 * 4774 4609 4328 6932 4476 5372 2809 4559 7064 3427 * 4047 3360 2298 4389 6818 * 5188 20 18 * 6316 * * * * 6560 0 0 V 21 2317 5407 * * 2874 * 5905 5555 * 5742 * 7931 * 6289 * 3349 5671 2450 * 1916 21 25 5865 * 2000 415 * 0 6560 1103 1000 M 22 2489 2254 * 4889 5905 * * 6389 * 4543 6723 * * 3292 * 3697 3467 2134 * * 22 0 * * * * 0 * 6560 0 1000 T 23 3454 * 3093 3700 5018 4741 6975 6796 2449 6616 * 3961 * 3705 3030 3321 4030 * * 6449 23 0 * * * * * * 6560 0 0 E 24 7296 6600 4277 2900 2059 5997 * * 2886 3968 6050 4575 * 3399 4567 6333 5877 6302 6197 3425 24 0 * * * * * * 6560 0 0 L 25 3649 6116 * * 3524 * * 1095 * 2718 6376 * * * * * * 2421 * * 25 41 6320 5999 1585 585 * * 6571 1000 0 L 26 4912 4566 * 4725 6382 * 2703 2987 2381 3498 5199 6377 * 4388 6642 5968 4179 3113 * 5023 26 0 * * * * * 0 6670 0 1000 L 27 4621 * 3773 2396 * 5235 5806 * 2870 3960 5781 3934 * 3705 2559 3865 5181 7043 5874 * 27 0 * * * * * 0 6670 0 1000 H 28 2143 6676 * 5558 3452 4785 6735 2875 4425 3400 * 4580 * * 6945 4052 2914 3866 * 5915 28 0 * * * * * 0 6670 0 1000 A 29 1025 3325 * * 6148 3795 * 3482 7016 3697 * 6678 * * * 5798 5192 3425 * * 29 0 * * * * * 0 6670 0 1000 R 30 4947 6140 3902 2872 * 5181 4696 5518 1682 * * 4295 * 5593 3486 3322 5442 * * 3910 30 14 6646 * 2585 263 * 0 6670 1000 1000 N 31 3734 6007 4163 3080 * 6646 * 5650 3578 5566 * 2710 5673 3735 2976 3754 4541 4964 * 3703 31 17 6451 * 0 * * 0 6670 1000 1000 E 32 4634 6148 * 6735 3401 6948 * 5055 3524 1815 3165 5362 * * 5327 4075 2597 5650 * 5209 32 133 3977 5366 135 3482 * 0 6670 2685 1000 K 33 6351 * 3235 4657 * 1440 * 4462 4494 6886 * 2457 * 3594 6821 3510 6219 * * * 33 26 7029 6587 3459 138 573 1610 6644 1000 1958 V 34 3297 * 5866 5565 4161 5946 * 1632 * 2720 * 5197 4657 6375 * 4674 5894 2811 * 4802 34 18 * 6335 * * 923 1081 6679 0 1503 V 35 4249 * 3501 3824 * 5701 5611 4840 2191 6011 * 4889 3007 3632 3771 4175 4775 3728 * * 35 0 * * * * * 0 6678 0 1732 L 36 4858 5839 * * 5462 * * 2158 6923 2574 4389 5560 * * 5701 5682 3823 1592 * 6060 36 12 * 6953 * * 927 1076 6678 0 1732 R 37 3477 7458 5138 4035 * 4749 7113 5760 2045 * 6925 4781 5356 5908 3671 2410 3521 4050 * 6622 37 18 * 6358 * * * 0 6687 0 1507 G 38 6344 5664 3652 3762 * 897 * * 3399 6608 * 4685 5839 * 5093 5512 * 4324 6054 * 38 39 6295 6162 4644 59 * 0 6740 1000 1961 P 39 4550 5293 * 3630 * 6323 6459 5220 5157 5835 * 6515 1009 5831 5608 3094 5660 3798 * * 39 0 * * * * 0 * 6714 0 2432 V 40 5143 6358 6598 5316 3714 * 4384 2056 4776 4995 4692 * * * 6835 * 3469 2117 4468 3678 40 40 * 5205 * * * * 6697 0 0 R 41 2472 6351 6676 * 4726 4847 * 6128 * * 5325 4795 1325 * 2870 3956 5461 5786 * 6829 41 15 * 6561 * * 0 * 6611 0 1125 L 42 6381 * 6202 6621 4807 * 5634 4836 * 683 3067 5460 6205 3965 6679 * 7212 6116 * * 42 0 * * * * 0 * 6689 0 1000 P 43 4599 * * 6606 * * * * 3432 * * * 262 * 5524 * * * * * 43 36 5329 * 0 * * * 6687 1466 0 T 44 3926 * 6354 6147 6239 * 5585 6020 3611 7696 4956 5307 2679 * 4181 5127 1295 4178 * 6418 44 0 * * * * * * 6687 0 0 R 45 4816 * * 4234 * 5368 4848 4071 1531 * * 6966 * 2885 2392 4400 3928 * * * 45 0 * * * * * * 6687 0 0 T 46 5880 * 6063 3888 4835 * 5025 3457 1986 7065 6239 6588 5708 * 2174 5882 2787 4601 * 5921 46 14 * 6653 * * * * 6687 0 0 L 47 5668 * 6230 3124 4288 5270 5096 3898 2837 2585 6118 6338 * 4418 2685 4956 3790 5531 * 5875 47 0 * * * * * 0 6687 0 1000 K 48 5334 * * 4604 7244 * 5872 3043 2437 3291 * 4757 * 5392 1793 4224 5003 3875 * * 48 25 * 5875 * * * 0 6687 0 1000 V 49 4607 * * 6691 2497 * * 3173 6575 4449 6745 * * * * * * 1844 3150 2290 49 40 * 5210 * * 0 * 6703 0 1713 T 50 4904 3213 5742 * * * * 5389 4827 5256 6110 6602 3225 4471 * 5013 870 * * * 50 0 * * * * * 0 6712 0 1651 T 51 5176 * 5306 * 4632 * * 4741 5047 3226 5495 * * 4371 6127 * 2351 1195 * 6100 51 0 * * * * * 0 6712 0 1651 R 52 * * * 5306 4547 * 5576 3837 5628 1078 6110 3687 5128 * 2803 6209 * 5744 * 4296 52 59 * 4649 * * 0 * 6712 0 1651 K 53 3989 5609 * * * * * 4743 1357 * * 6763 * 5180 1228 5323 * * * * 53 70 * 4401 * * * 0 6689 0 2009 T 54 4066 * 5281 5612 * 6541 * 6441 * 4492 * 4548 5754 5233 3855 724 3942 * * * 54 30 * 5612 * * * 0 6577 0 2671 P 55 5024 * * * * 5242 * 6545 6128 3201 * 6583 545 * * 5403 5322 4357 * 5988 55 17 * 6453 * * 1264 777 6605 0 2773 C 56 * 2909 5971 4690 2632 5190 1205 * 5873 7485 * 5738 5795 * 4687 3957 * 6135 * 6267 56 42 * 5120 * * 286 2476 6654 0 2688 G 57 3472 * 4233 5203 * 2166 5357 2691 6030 * * * 4718 * * * 4111 1661 * * 57 141 * 3427 * * 0 * 6818 0 2308 N 58 6590 * 1942 3215 * * 2901 5966 3840 * * 1989 * 3252 6585 5726 * * * 5974 58 819 * 1208 * * 0 * 6643 0 2868 G 59 5218 * 5198 * 3200 1115 6302 * * * * * * * * 2332 * 5629 * 2796 59 53 * 4791 * * 0 * 6528 0 3831 T 60 4729 * 7164 4347 * * * * 989 * * 5664 5304 * 5297 3013 2319 * * 7029 60 21 * 6084 * * 0 * 6737 0 1739 N 61 4852 * 3330 4638 * * 4803 5936 1144 * * 3367 5316 4349 3747 6818 5809 4649 * 6822 61 0 * * * * * 0 6719 0 1000 T 62 4284 6632 * * * * 3530 3958 3786 * 4612 * * 5478 4567 1227 2683 5223 * * 62 0 * * * * * 0 6719 0 1000 W 63 * * 5055 4674 5568 7016 * * 3934 4550 5192 * * 2988 1306 * 6152 * 2718 3839 63 0 * * * * 0 * 6719 0 1000 D 64 3724 * 1992 1544 6839 * 6379 6142 * 5282 * 5036 * * 5529 3754 4337 3415 * * 64 0 * * * * * * 6742 0 0 T 65 6882 * 3611 3387 5852 * 3099 * 3943 5358 * 3727 6240 1377 3879 5631 5116 * * * 65 36 5339 * 0 * * * 6811 1000 0 Y 66 5252 * * * 1138 * 5016 4664 * 7039 5759 * * * * 6197 * * 3421 1662 66 0 * * * * * * 6811 0 0 E 67 5377 * 4980 794 * * 5151 5246 3619 6231 * 6583 * 3736 5852 4478 5275 4850 6606 * 67 0 * * * * * * 6811 0 0 L 68 * * * * 4101 * * 2199 6799 2196 2127 * * 5024 3523 7044 5706 4165 6760 4101 68 0 * * * * * * 6945 0 0 K 69 5809 * * 5355 * * 5294 3980 2515 * * 5459 * 4790 1135 4509 2880 * * * 69 0 * * * * * * 6945 0 0 I 70 * * * 4333 6799 * * 2315 5932 5391 4903 5662 * 5029 5177 5819 1520 2446 * 4681 70 0 * * * * * * 6945 0 0 Y 71 * * * * 3950 * 1020 * 4299 5615 * 5843 * 6346 * 5922 * * 6589 1670 71 0 * * * * * * 6945 0 0 K 72 5153 * 6090 3232 5920 4549 4641 7910 1398 6056 * * * 3841 2942 4637 4600 5358 * 4408 72 19 6244 * 0 * * * 6814 1000 0 R 73 * 5351 * * * * * * 4179 6056 5719 * * 5467 290 7843 5374 5846 * * 73 0 * * * * * * 6929 0 0 L 74 4536 6562 5102 5547 4797 7428 * 2861 4917 1851 5188 4278 * * 4215 4963 4906 2797 6056 4351 74 0 * * * * * * 6929 0 0 V 75 * * * * 3734 * * 1302 * 2157 4503 * * * * * * 2149 * 5288 75 0 * * * * * * 6929 0 0 E 76 5825 * 2060 2772 6660 6940 5169 4201 4552 * 6223 4750 * 2335 4355 4799 5535 4370 6336 4742 76 10 7117 * 0 * * * 6797 1000 0 L 77 * * * * 4228 * * 1139 * 2002 3832 * * * * * 6270 2812 * 5851 77 183 3067 * 1397 689 * * 6853 3510 0 R 78 5198 * 3803 4371 * 6211 3207 4444 2802 6676 * 3818 5147 4669 3901 2868 3630 5275 6400 3814 78 242 2697 * 1366 709 * * 6846 3934 0 A 79 2149 3330 3360 4562 5353 3462 * 6056 * * * 2923 * 6768 * 2710 3428 6862 * 6678 79 118 3665 * 1110 898 * * 6787 3105 0 P 80 5248 * 4201 5292 4919 4201 3370 6065 7052 4417 * 3672 2832 5641 5823 3088 2318 3931 * * 80 15 6550 * 1585 585 * * 6955 1000 0 T 81 2178 * 2526 4600 * 6057 5100 6110 4458 4418 * 3861 2860 4761 * 3975 3663 5199 * * 81 173 3145 * 1735 515 * * 7022 3260 0 E 82 5449 * 2635 2681 * * 5187 4381 3423 * * 3404 2689 3576 3840 4543 4457 * * * 82 47 4961 * 444 1915 * * 7022 2147 0 L 83 3685 * 5450 4255 5914 * * 2682 * 2677 5211 4245 * 4286 * * 1838 3668 5670 6778 83 66 4493 * 1884 456 * * 6738 2411 0 V 84 3681 * * 6034 2052 * * 2525 * 2292 5491 * * * * * 5036 2449 5674 4953 84 29 5670 * 0 * * * 6738 1000 0 K 85 5216 * 2784 3379 * * 5121 4481 3225 2377 6400 5461 * 5059 2945 3831 4506 4317 * * 85 0 * * * * * * 6738 0 0 K 86 3562 * 3632 2426 5440 4629 * * 3145 4873 5086 4823 * 2991 3499 3753 4166 5107 * * 86 17 6375 * 0 * * * 6566 1000 0 I 87 * * * * 3713 * * 1833 * 1531 6315 * * * * * 5858 2939 * 2870 87 0 * * * * * * 6518 0 0 T 88 4337 6497 6716 * * 5202 * 2379 5391 2504 2182 5993 * 5151 * 5176 2860 3630 * * 88 0 * * * * * * 6494 0 0 S 89 * * 5218 2918 5853 5483 6967 5834 3583 5289 5674 3814 5991 1775 3362 3161 4920 6716 * 5932 89 16 * 6497 * * * * 6494 0 0 F 90 3475 * 5986 * 2837 4910 6125 2800 5972 2818 * * * 4065 3149 5065 3880 3268 4999 * 90 94 3991 * 1212 815 0 * 6485 2610 1000 P 91 3745 5894 2998 4879 * * 4837 6507 3599 * 5835 2281 3782 3673 4497 3135 3912 5506 * * 91 0 * * * * * * 6567 0 0 I 92 * 5766 * * 3511 * * 2341 4936 1211 4549 4041 6291 * * * * 3111 * * 92 18 6300 * 1585 585 * * 6567 1000 0 D 93 4786 * 4141 4448 4308 6379 * * 7783 5979 * * 499 * * 4599 * 5079 * * 93 49 4914 * 1107 900 * * 6567 1722 0 A 94 2344 * 3816 1935 * * * 5816 6221 * * 5927 1985 * * 3524 4926 4795 * 6113 94 16 6526 * 1585 585 * * 6464 1000 0 G 95 4804 * 3586 5411 5629 570 5600 * 6319 * * 6567 * 6015 5729 4636 4455 * * * 95 0 * * * * * * 6464 0 0 V 96 5945 * * * * * * 2939 * * * * * * * * * 229 * * 96 0 * * * * * * 6464 0 0 D 97 3158 * 2627 2806 5875 4684 3833 4744 3426 * * 3911 * 3837 5582 3396 4788 * 6386 5259 97 0 * * * * * * 6472 0 0 V 98 5561 * * * 5191 * * 1375 * 3006 2842 * * * * 6459 6062 1859 * * 98 0 * * * * * * 6424 0 0 A 99 5089 * 3630 1535 * 5689 3753 * 3680 5348 * 3716 * 4907 4282 3373 3711 6062 * * 99 0 * * * * * * 6424 0 0 I 100 3757 6230 * * * * * 1575 * 3325 4367 * * * * * * 1222 * * 100 0 * * * * * * 6424 0 0 T 101 6429 * * 2135 * 4549 * 6161 1988 * * 5933 * 4474 5335 2267 2929 6111 * 6348 101 0 * * * * * * 6098 0 0 I 102 * * * * * * * 1678 * 1834 3861 * * * * * * 1564 * * 102 0 * * * * * * 5329 0 0 P 103 * * * * * * * * 1133 * * * 878 * * * * * * * 103 0 * * * * * * 2687 0 0 H 104 * * * * * * 565 * * * * * * * * * * * * 1625 104 0 * * 0 * * * 2132 0 0 //