HHsearch 1.5 NAME c3whlB_ FAM FILE c3whlB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3whlB_.a3m DATE Sat Mar 29 08:15:39 2014 LENG 92 match states, 92 columns in multiple alignment FILT 73 out of 77 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.0 EVD 0.4500 0.9969 SEQ >ss_dssp CCCCCCCCTTHHHHHTTGGGCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >sa_dssp EDEECEECEEBEDCBECAEEBECDDAEEACDCACDBBEBCDDBBEDDEDECEEEEDEEECDDBCDDADDBDECCDDADECCDDCDDEDEEEE >ss_pred CCCHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 95000128789987613310149999999999999999999988435878876755999999999999998889999999999999997319 >Consensus xxxxxxidpxlxxxixxlxxlxlxeLxxxKxxiExelxxlxxvLdxegfpxxxDIDvxxVRxxRxrixxLrNDxkximxxiexxLxxxfxxl >c3whlB_ LLANVKIDPSLTSRISQIDSFKLSELMVLKTDIETQLEAYFSVLEQQGIGMDSDVDVLQVTMIRKNVNMLKNDLNHLLQRSHVLLNQHFDNM >UniRef50_C5JRN2(28-114:248) 26S proteasome non-ATPase regulatory subunit Nas2 n=8 Tax=Onygenales RepID=C5JRN2_AJEDS E=2e-16 s/c=1.00 id=26% cov=84% ----------------ELSSLSLDELFDEKERLEAEFRELSSVLDSHGVTMLTslttfdgyprdDLDIAQIRTTRARIIHLRNDYKDVMARVEQGVHEGF ARL >UniRef50_B7PLI2(16-115:230) 26S proteasome non-ATPase regulatory subunit, putative n=2 Tax=Ixodes scapularis RepID=B7PLI2_IXOSC E=1e-10 s/c=0.67 id=29% cov=90% --SKFRIFETLNRTMQRYK-LQLSHLTKRKLEIEADIASQKAILDANGIGMNeplidnegfprSDIDVYKVRHARHRIICLLNDHKTLMKDIEQAL---- --- >UniRef50_Q10920(4-83:197) Probable 26S proteasome non-ATPase regulatory subunit 9 n=2 Tax=Caenorhabditis RepID=PSMD9_CAEEL E=1e-05 s/c=0.63 id=24% cov=76% -------------------HSKAKELLQQRDELDGKIKELMLVLETNNSTMDsplldaegyplNTIDVYAVRHARHDLICLRNDRAALTEKIVVEMENE- --- >UniRef50_D2VGQ2(17-108:136) Putative uncharacterized protein FM147 n=1 Tax=Naegleria gruberi RepID=D2VGQ2_NAEGR E=3e-05 s/c=0.54 id=22% cov=83% ---------EIPEKPSKLTTQYIKQLVNIKDEMEKEILHLnlsldklgvglkGSLLDKDGFPR-SDMDLNDVASKRHRIACLQNDFSSLMDTIQNYL--- ---- >UniRef50_A8B447(9-82:82) Putative uncharacterized protein n=2 Tax=Giardia intestinalis RepID=A8B447_GIALA E=5e-10 s/c=0.89 id=29% cov=74% ---------------------KLMELDIRKKEIEAEaksyqevLNAYPKVLDDEGFPLPN-VPHELVANAKHKLVCLKTDYKNIMNEIESYLPYAF--- >UniRef50_A4HWS8(18-111:257) Proteasome 26S non-ATPase subunit 9, putative n=3 Tax=Leishmania RepID=A4HWS8_LEIIN E=1e-09 s/c=0.69 id=29% cov=85% --------PAVESTIGDMDKEALREelrrLDAQKAALEAKLTDALQylastpvglrgrLLDDEGFPR-NDCDLYAVRTARNTADSTRNDLRVLNEKIYSL LN------ >UniRef50_Q6BVZ8(15-117:230) DEHA2B15444p n=3 Tax=Saccharomycetales RepID=Q6BVZ8_DEBHA E=2e-13 s/c=0.74 id=27% cov=98% LMKNLNLDESqFKSYKTNFSQLTYDQLSTTKNEIESQLSLLFDilanqykadmatpLLTDDGYPR-NDIDVVGIRLIRVKIIRLRNDVKLVYTLLETKLI EKFE-- >UniRef50_Q6CQU6(33-134:251) KLLA0D14135p n=1 Tax=Kluyveromyces lactis RepID=Q6CQU6_KLULA E=2e-13 s/c=0.75 id=31% cov=99% --NEITIIPTgLTERINELPHLNFSQASQLKKEVEDELTNQFDNLSAHKVDMNTplttaegfprgDLDLVTIRLIKRNVNVLRNDLRRIIERVEYLLPLE FESL >UniRef50_Q6C5B5(2-83:204) YALI0E19470p n=1 Tax=Yarrowia lipolytica RepID=Q6C5B5_YARLI E=1e-10 s/c=0.82 id=24% cov=74% ------------------------ELQNKRNSLRETVDALYDVLKSHNVNMttpltvdgfpRADIDVHQIRNTRHQIIRLENDIEAIQKELEEAVMGHWQ N- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * L 1 * * * * * * * * * 0 * * * * * * * * * * 1 0 * * * * * * 1650 0 0 L 2 * * * * * * * * * 783 2192 * * * * * * 2322 * * 2 0 * * * * * * 2521 0 0 A 3 2843 * * * * * * * 2748 * * 1833 * * * 1214 * * * * 3 0 * * * * * * 3027 0 0 N 4 * * * 2890 * * * * 2924 * * 1026 * * 2045 * * * * * 4 0 * * * * * * 3186 0 0 V 5 3170 * * * 3048 * * 2116 * 1670 * * * * * * * 3139 * 3190 5 0 * * * * * * 3253 0 0 K 6 3384 * * * * * * * 2298 * * 2446 * 3297 3240 * 1691 * * * 6 0 * * * * * * 3399 0 0 I 7 * * * * * * * 483 * 1812 * * * * * * * * * * 7 0 * * * * * * 3399 0 0 D 8 * * 509 * 3350 * * 3285 3372 * * * * * * * * * * * 8 0 * * * * * * 3470 0 0 P 9 3585 * * 1994 * * * * * * * * 587 * * * * * * * 9 107 3801 * 0 * * * 3633 1000 0 S 10 2042 * * 2571 * * * * 3960 3756 * * * * * 2229 2075 * * * 10 246 2672 * 0 * * * 3817 1628 0 L 11 * * * * 2876 * * 2102 * 1124 * * * * * * 3681 3411 * * 11 0 * * * * * * 3817 0 0 T 12 3820 * * 3411 * * * * 3798 3803 * 3631 3452 2854 2149 * 2683 * * * 12 0 * * * * * * 3817 0 0 S 13 * * * 1621 * * * 3701 3756 * * 2879 * * 3631 2079 3823 * * * 13 0 * * * * * * 3817 0 0 R 14 * * * * 3681 3820 * * 2617 * * * * 2174 2683 * 2516 * * 2876 14 0 * * * * * * 3817 0 0 I 15 * * * * * * * 872 4048 2987 3921 4224 3586 * * * * 3964 * * 15 0 * * * * * * 3876 0 0 S 16 * * 3936 3024 * 2870 * * * * 3964 3730 * 2974 * 2248 2339 * * * 16 0 * * * * * * 3876 0 0 Q 17 * * 1965 2202 * * * * 2137 * * 4451 * 3292 3275 * 4385 * * * 17 70 * 4409 * * * * 3994 0 0 I 18 * * * * 3548 * * 2264 * 962 3726 * * * * * * * * 3090 18 0 * * * * * 0 3917 0 1000 D 19 * * 2501 2993 * * * * 2723 * * * 4086 4181 * 1466 3829 * * * 19 83 * 4160 * * * 0 3986 0 1000 S 20 * * 4463 4457 * * 1973 * 3392 * * * * 2875 4131 2228 2715 * * * 20 0 * * * * 880 1130 4036 0 1430 F 21 * * * 3194 3522 * * * * 886 3916 * * 4041 * 2881 * * * * 21 0 * * * * * 0 4088 0 1000 K 22 3482 * 4691 * * 5097 * * 2249 * * 3241 4678 4657 4130 2141 3090 * * 4431 22 0 * * * * * 0 4223 0 1000 L 23 3948 * * * 3788 * * 2658 * 1054 5338 * * * * * * 3343 * 3329 23 0 * * * * * 0 4195 0 1000 S 24 4377 * 4279 5627 * * * * 2210 4961 3608 5454 3120 2908 3021 3312 5037 5349 * * 24 0 * * * * * 0 4191 0 1000 E 25 * * 3569 750 * * 5257 * * * * * * 2322 4507 5179 5421 * * * 25 50 4875 * 2000 415 0 * 4204 1000 1000 L 26 5030 * * * * * * * * 153 5612 * * * * * * 4326 * * 26 0 * * * * * * 4364 0 0 M 27 4266 * 2885 5957 3646 5427 * 3833 * 3748 1980 * * 4135 * 3333 5679 3502 * 4993 27 0 * * * * * * 4362 0 0 V 28 2611 * 2847 4170 * * * 4860 3176 5403 * 3440 * 2472 3770 3948 4783 5248 * * 28 0 * * * * * * 4362 0 0 L 29 3829 5319 * 2722 * * * 4188 2915 2511 * * * 3129 2825 * 3856 4295 * 6093 29 0 * * * * * * 4362 0 0 K 30 * * * 4963 * * * * 351 * * * * * 2442 * * * * * 30 0 * * * * * * 4340 0 0 T 31 5054 * 1758 2666 * * * * 2087 5754 * 3877 * 5757 5539 4588 3145 * * * 31 0 * * * * * * 4340 0 0 D 32 3271 * 3010 1705 * 6135 4745 * 3536 5527 * 5089 * 4515 2849 3803 5474 * * * 32 0 * * * * * * 4340 0 0 I 33 * * * * * * * 1086 * 1462 3141 * * * * * * 4248 * * 33 0 * * * * * * 4340 0 0 E 34 * * 3775 158 * * * * * * * * * * 5030 * * * * * 34 0 * * * * * * 4340 0 0 T 35 1768 * 3866 4465 * 4609 5547 5513 2723 * * 4704 * 4137 * 3046 3105 5374 * * 35 0 * * * * * * 4340 0 0 Q 36 * * 4001 1014 * * * * 3138 5547 * * * 2350 5539 5527 3881 * * * 36 49 4890 * 2807 222 * * 4340 1000 0 L 37 * * * * 5828 * * 1619 * 1010 2948 * * * * * * 5030 * * 37 34 5437 * 3585 126 * * 4340 1000 0 E 38 3267 * 4465 2337 * 3993 * * 2538 5173 * 3307 * 5304 3719 3455 3596 * * 6158 38 0 * * * * * * 4350 0 0 A 39 1749 * 4196 2871 * 5561 4342 * 5369 4849 * 5026 * 3781 3563 3206 3995 * 5464 * 39 0 * * * * * * 4350 0 0 Y 40 5038 6210 5464 * 4188 * 3882 3925 * 1051 * 3798 * 3016 * * * * 6367 4197 40 41 5173 * 3585 126 * * 4350 1000 0 F 41 5168 * * 4872 2253 2560 * * 5145 2957 3439 * 5035 6300 * 3682 3851 4758 * 3606 41 0 * * * * * * 4268 0 0 S 42 4839 * 1932 2851 * 4551 * * 4262 4187 * 5504 * 2820 * 2220 4782 * * * 42 68 4445 * 3653 120 * * 4251 1655 0 V 43 * * 5468 * 6173 * * 2695 * 2034 6118 5331 * * 3595 * 5741 1392 * 4532 43 24 5922 * 3585 126 * * 4251 1000 0 L 44 * * * * * * * 4923 * 48 * * * * * * * * * * 44 250 2653 * 3706 115 * * 4327 2566 0 E 45 4547 * 1095 3280 * 6161 5189 5293 3787 5139 * 4581 * 4190 * 4570 3651 * * * 45 25 5887 * 3700 115 * * 4327 1000 0 Q 46 2853 * 2627 4771 * 4895 5553 * 4185 * * 3136 3818 5382 4860 1859 5750 5977 * * 46 80 4212 * 3287 156 * * 4103 1995 0 Q 47 * * 2708 1184 * * 3358 * * * * 3040 * 2998 * 6837 * 4694 * 6037 47 89 4067 * 2914 205 * * 4127 1955 0 G 48 * * 5885 * * 474 4922 * 5643 * * 3291 * 5351 4486 4694 * * * * 48 10 7186 * 0 * * * 4127 1000 0 I 49 4163 * 5521 * 1068 * * 4141 * * * * * * * 5800 * 1885 * 3321 49 0 * * * * * * 4127 0 0 G 50 * * 3206 * * 2515 * * * * * 3948 832 * * * 4281 * 4694 * 50 0 * * * * * * 4127 0 0 M 51 * * * * 5521 * * 5485 * 3440 1379 * * * 1061 * * * * * 51 1021 3714 1214 3425 141 * * 4127 2300 0 D 52 * * 1842 4456 * * 3975 * 5263 5587 * 2404 2852 4704 2653 4631 * * * * 52 734 1744 3320 3233 162 0 * 4289 2874 3108 S 53 2851 4591 5408 * * 4121 * * * * * 1611 * * * 1823 2957 * * * 53 338 2950 3655 3437 140 0 * 4119 2698 2032 D 54 5270 * 211 * * * * * * * * 5890 * * * 5945 3702 * * * 54 0 * * * * 0 * 4044 0 1947 V 55 * 3605 * * * * * 754 * 3082 5223 * * * * * * 2474 * * 55 53 4791 * 2953 200 * * 4127 1535 0 D 56 * * 99 * * * * * * * * * 5156 * * * * 4696 * * 56 0 * * * * * * 4129 0 0 V 57 * * * * * * 3876 1929 * 2600 * * * * * * * 987 * * 57 0 * * * * * * 4105 0 0 L 58 3682 6089 * 5135 5601 * 4493 4844 * 3019 5519 5236 3386 * * * * 3397 6493 1301 58 0 * * * * * * 4105 0 0 Q 59 2124 * 5236 4049 * 4977 * * 3978 4051 4894 * * 1935 3759 3175 4373 * * * 59 61 4592 * 5524 32 * * 4105 1000 0 V 60 4377 * * * * * * 1541 * 5592 * * * * * * * 767 * * 60 0 * * * * * * 4105 0 0 T 61 3726 * * * * * * 5850 6150 6035 * * * * 253 * 4703 * * * 61 0 * * * * * * 4105 0 0 M 62 4890 * * * * 5094 3174 4608 3739 3023 5691 3202 * 4681 4512 3435 1999 6441 * 5481 62 0 * * * * * * 4105 0 0 I 63 1242 * 4538 4204 * * * 2936 5236 3657 * * * 6035 * 4667 2906 4176 * * 63 0 * * * * * * 4105 0 0 R 64 * * * * * * * * 3219 * * * * * 164 * * * * * 64 0 * * * * * * 4105 0 0 K 65 3181 * * * * 3874 1699 * 3775 * * 3471 * 3047 3231 4820 4823 4261 * * 65 0 * * * * * * 4105 0 0 N 66 5770 * 5253 4315 * 6217 * * 2960 * * 2859 * 4046 1131 4293 4125 * * * 66 0 * * * * * * 4105 0 0 V 67 4657 * * * 4776 * * 789 * 2270 * * * * * * * 3234 * 4998 67 0 * * * * * * 4105 0 0 N 68 2276 * 5017 * * * 4991 1358 * * 5380 2573 * * 3995 * 5715 3897 * * 68 0 * * * * * * 4105 0 0 M 69 6663 1477 * 3203 * * 4107 4939 * 5032 3141 * * * 2582 4968 4786 4245 * * 69 0 * * * * * * 4105 0 0 L 70 * * * * * 5770 * 4455 5524 176 * * * * * * 5111 * * * 70 0 * * * * * * 4105 0 0 K 71 * * * 4307 * * 6089 * 2482 4273 * 4510 * 2242 1194 * 6411 * * * 71 0 * * * * * * 4105 0 0 N 72 * * * * * * 5620 * * * * 345 * * * 4340 2805 * * * 72 0 * * * * * * 4105 0 0 D 73 * * 49 4894 * * * * * * * * * * * * * * * * 73 0 * * * * * * 4105 0 0 L 74 * * * * 5260 * 1784 5171 * 1803 * * * * 3090 * * 6077 6453 2149 74 0 * * * * * * 4100 0 0 N 75 4420 * 5821 4482 * 4928 5849 * 821 6471 * 5580 * 4016 3699 3616 * 5507 * * 75 0 * * * * * * 4100 0 0 H 76 2025 * 2864 2859 * * 5580 * 3225 4097 * 3526 * 5228 3979 4839 4056 5588 * * 76 0 * * * * * * 4100 0 0 L 77 * * * * * * * 2152 5535 1419 * * * * * * 5579 1480 * * 77 0 * * * * * * 4100 0 0 L 78 * * * 3705 * * * 4298 * 3384 1085 4277 * 6083 4493 5354 3085 4735 * 6077 78 13 6761 * 3000 193 * * 4100 1000 0 Q 79 4874 * 2507 2020 * * * * 2413 6107 * 2787 * 4299 6011 4070 4669 5007 * * 79 0 * * * * * * 4070 0 0 R 80 5033 5751 6529 2384 * * 5379 6205 2471 3288 * * * 2896 2214 4579 4780 * * * 80 0 * * * * * * 4062 0 0 S 81 * 6031 * * * * * 798 * 1951 5494 * * * * 4595 5781 3854 * * 81 0 * * * * * * 4144 0 0 H 82 4962 * * 861 * * 3068 * 5645 * 6178 3992 * 4258 * 3814 5194 5113 * 5524 82 0 * * * * * * 4144 0 0 V 83 4608 * * 2460 * * * * 2046 6021 * 4023 * 2823 5946 3789 3411 3158 * 5492 83 0 * * * * * * 4196 0 0 L 84 2266 * * 4774 * 2546 5772 * 3683 2045 * * * 6298 4136 4565 * 4050 * 3764 84 0 * * * * * * 4149 0 0 L 85 * * * * * * * 3519 * 381 3700 * * * * * 5960 4262 * * 85 0 * * * * * * 4149 0 0 N 86 2597 * * 3131 * * 2356 5390 * * 4954 2813 2720 4098 * 3643 * * * 4771 86 0 * * * * * * 4174 0 0 Q 87 4446 * 4033 2686 * 3806 * * 3848 3849 * 3062 4218 2187 4490 4911 * * * 4146 87 0 * * * * * * 4127 0 0 H 88 3390 * * 2908 * 5331 1636 4660 5042 * * 4778 * 3427 * * * 2357 * 5046 88 0 * * * * * * 4124 0 0 F 89 * * * * 446 * 4108 4906 * * * * * * * 4758 * * 4472 3432 89 0 * * * * * * 3965 0 0 D 90 2249 * 2799 1496 * * * * * * * * * 2596 * 3674 4391 * * * 90 0 * * * * * * 3796 0 0 N 91 * * 3711 3967 * * * * * 3869 * 1704 * * 2251 1867 * * * * 91 0 * * * * * * 3642 0 0 M 92 * * * * * * * * * 282 2494 * * * * * * * * * 92 0 * * 0 * * * 3272 0 0 //