HHsearch 1.5 NAME c3w0dA_ FAM FILE c3w0dA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3w0dA_.a3m DATE Sat May 25 08:33:37 2013 LENG 68 match states, 68 columns in multiple alignment FILT 87 out of 91 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.4 EVD 0.4613 1.9119 SEQ >ss_dssp CHHHHHHHHHHHHHHCTTSBCCHHHHHTCCCSSEEEECTTCCCCCCCCTTCEEEEECTTSBEEEEEEC >sa_dssp EDEDAEEBBDDADEECDDDDCDEEBCEDBEBEDCCCCDEEDEDEEEEDCCCAAACACEEDDADDADCC >ss_pred CCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCEECCCCCCCEEEEEECCCCCEEEEECC >ss_conf 98644888888778761971246777421655227726988330366887269999899829997719 >Consensus xpxxCxxxaxxxxQxlVGqxxtexxxxxxgaxxxRvixPxxxvTmDyrxdRlNixxDxxgxIxxvxCG >c3w0dA_ DPATCEKEAQFVKQELIGQPYTDAVANALQSNPIRVLHPGDMITMEYIASRLNIQVNENNEIISAHCA >UniRef50_A5VF51(35-101:101) Putative uncharacterized protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VF51_SPHWW E=1e-05 s/c=0.76 id=29% cov=97% -PVACapARAEAFVGQN--GQAVAEQARTAAGAKTVRVIAPGQAVTMDYRTDRLNVETDAAGNVVKVYCG >UniRef50_B6B414(33-94:94) Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6B414_9RHOB E=6e-06 s/c=0.84 id=30% cov=93% -PETCSKSEFA---SLMGTQINDAALPLTLTY--RVVWPDDLVTTDFVEDRLEIAVDGSGIITGLRCG >UniRef50_Q4ZUH0(46-113:113) Lipoprotein, putative n=9 Tax=Pseudomonas RepID=Q4ZUH0_PSEU2 E=5e-11 s/c=1.01 id=26% cov=100% -PGRCDAGlAQFAIGKQASIDLLSQVRARSGSQDARILGPDDMVTLEYRSERVNVNTDASGKVTRINCG >UniRef50_B5J1M9(38-98:99) Putative uncharacterized protein n=2 Tax=Octadecabacter antarcticus RepID=B5J1M9_9RHOB E=5e-07 s/c=0.91 id=31% cov=76% ---------------LIGEDAT-TLERVLLLGQVRVIRQNQADTMDFRPERINFNVGSDNRIRSTSC- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * D 1 * * 914 1091 * * * * * * * * * * * * * * * * 1 0 * * * * * * 2057 0 0 P 2 * * * * * * * * * * * * 0 * * * * * * * 2 0 * * * * * * 3228 0 0 A 3 1529 * 3442 3472 * 1960 * * * * * * * 2826 * * * 3772 * * 3 0 * * * * * * 3635 0 0 T 4 3852 * * * * * * * * 4026 * 3756 2799 * 3728 1975 1636 * * * 4 0 * * * * * * 3679 0 0 C 5 * 91 * * * * * * * * * * * * * * * 4030 * * 5 74 4330 * 1000 1000 * * 3835 1000 0 E 6 2672 4030 2331 3752 * 3863 * * 4169 * * 1892 * * * 3854 4442 * * * 6 0 * * * * * * 3835 0 0 K 7 1029 * * * * * * * 2802 * * * 2991 * 4330 3032 * 3863 * * 7 0 * * * * * * 3835 0 0 E 8 2671 * 2602 1579 * 4238 * * * * * * * 3503 * 2981 3723 * * * 8 190 3021 * 0 * * * 3835 1566 0 A 9 622 * * 2361 * 4030 * * * * * * * 4359 * 4449 * * * * 9 386 4120 2497 0 * * * 3835 1000 0 Q 10 4060 * * * 3555 * * * * * 4087 * * 1738 3587 * * 1914 * 2760 10 486 * 1806 * * * 0 3680 0 1958 F 11 3136 * * 3618 1343 * * * * * * * * * * 2352 3207 * * 3230 11 174 * 3136 * * * 0 3465 0 2782 V 12 2227 * * * * * 3456 * * 2991 * * * * * 3428 * 2110 * 2029 12 370 * 2144 * * 1436 665 3236 0 2937 K 13 2151 * * * * 3446 * 2295 2998 1958 * * * * * * * 3370 * * 13 0 * * * * 773 1269 3221 0 2944 Q 14 * * * 5485 * 3439 * * 4036 * * * * 349 * 5775 * 5564 * * 14 0 * * * * 588 1579 4422 0 2008 E 15 2941 * 3578 2494 * 3378 4517 * 4377 * * 4672 * 3256 4849 2591 * 4302 * 5309 15 22 * 6048 * * 0 * 4573 0 1000 L 16 * * * * 2609 * 5743 5165 5009 834 4486 * * 5636 * * * 5651 5998 3364 16 0 * * * * * 0 4977 0 1000 I 17 3393 * * * * * * 2012 * 4881 3475 * * * * * 4952 998 * * 17 0 * * * * 0 * 5019 0 1000 G 18 5127 * * * * 144 * * * * * 4399 * * * 5701 * * * * 18 0 * * * * * * 5006 0 0 Q 19 5997 * 6099 5650 * * 5862 5701 1746 * * * * 1260 3278 * 3870 5254 * * 19 0 * * * * * * 5006 0 0 P 20 6658 * 3195 5269 * * * * 3168 6010 5456 4084 1418 4131 4356 4306 3250 6558 * * 20 127 3962 5655 533 1695 * * 5017 2238 0 Y 21 1991 * 6199 * 6364 5464 6288 3129 * 2386 5799 6230 * * 3000 4790 4090 3739 * 4169 21 80 5388 5042 1000 1000 * 0 5071 1000 1000 T 22 3420 * 4187 4418 * 4164 * * * 3225 * 4250 * * * 2377 1427 5314 * * 22 571 3034 2288 2000 415 1557 599 4985 2695 2011 D 23 2897 * 2482 1102 * * * 5572 5392 * * 4266 4598 5227 * 4156 * * * * 23 358 2955 3457 2260 338 122 3628 4893 2670 3537 A 24 1903 * 4843 4760 * 5823 5082 * * * * * * 2036 3563 2663 3546 4584 * * 24 91 4462 6011 2056 397 311 2368 5187 2159 2521 V 25 2069 * 5059 * 3960 * * 2910 * 2162 4851 * * * 5327 5927 5959 2192 * * 25 52 5445 6365 2310 325 948 1054 5222 1536 1432 A 26 2792 * 5146 2799 5116 6460 4612 5945 3759 3349 * 5937 3403 6374 2324 4274 * 4643 * * 26 18 6330 * 2000 415 974 1027 5228 1000 1361 N 27 2629 * 5008 3540 6455 5712 6165 * 3249 5983 * 5090 5456 3885 2940 3563 2681 3940 * * 27 0 * * * * * 0 5233 0 1000 A 28 2542 * 4293 2966 * 5166 * 6354 3245 3681 4063 5199 4545 4160 2926 5011 5940 4033 * * 28 29 5664 * 2000 415 0 * 5204 1000 1000 L 29 3043 * 3270 5373 * * 5821 4432 * 2835 * * 5698 5721 4380 2162 2593 3812 * * 29 75 5482 5138 2333 319 * * 5202 1579 0 Q 30 5774 * 4458 4505 4540 1199 * 4266 6067 2261 6198 5814 * 4300 6171 * 6156 5148 * * 30 0 * * * * 0 * 5133 0 1361 S 31 1327 * 5775 4813 * 4902 6235 6680 * 4609 5874 * 2249 * * 2672 4933 * 4912 * 31 33 6518 6458 0 * * * 5131 1000 0 N 32 5066 * 4746 2763 * 3091 5798 * 2721 5665 * 5725 4866 3143 2652 3253 6635 * * 4704 32 30 * 5603 * * 0 * 5136 0 1000 P 33 3980 * 4675 5747 * 6832 * 3360 5698 3748 4837 3903 2783 3946 3889 3249 2828 4222 * * 33 20 6216 * 0 * * 0 4824 1000 1000 I 34 2565 * * * 4531 * 3122 3868 5156 2981 * * * * 5696 6253 5493 1532 5352 5342 34 0 * * * * 0 * 4607 0 1000 R 35 * * * * * * * * * * * 4939 * 5265 87 * * * * * 35 0 * * * * * * 4335 0 0 V 36 4219 * * * * * * 2196 * 5914 * * 4939 4505 * 5442 4228 1077 3567 * 36 0 * * * * * * 4335 0 0 L 37 4149 * * * * 4955 * 1667 * 1478 6482 * * * * 4599 5808 2980 * 4625 37 0 * * * * * * 4335 0 0 H 38 3315 3953 * 5823 * 2448 4552 * 3312 * * * 3070 5975 2346 4746 4437 6171 5698 4558 38 10 7167 * 1585 585 * * 4335 1000 0 P 39 * * * 4708 * * * * * 6377 * * 366 6037 * 4934 4491 4179 * 5246 39 0 * * * * * * 4335 0 0 G 40 * * 2387 * * 1025 5765 * * * * 2834 * 5808 5019 4389 4337 * 6272 * 40 0 * * * * * * 4335 0 0 D 41 3517 3953 2062 5000 * * 6374 * * * 4913 * * 2425 * 2415 2799 * * 6084 41 0 * * * * * * 4335 0 0 M 42 1742 * * * 4733 6633 * 3840 * 4159 2723 * 2534 * * 4890 4694 2931 * * 42 0 * * * * * * 4335 0 0 I 43 3568 5977 6040 * 6011 * * 4007 5909 3323 3297 * * * * * 3935 971 6249 * 43 0 * * * * * * 4346 0 0 T 44 * * * * * * * 4338 * * * * 4603 * * * 137 * * * 44 0 * * * * * * 4346 0 0 M 45 * * * 4455 * * * * 3291 3990 897 * 5358 3439 3730 * 5700 4603 * * 45 0 * * * * * * 4346 0 0 E 46 * * 403 2495 * * * * * * * 5319 4603 * * * * * * * 46 0 * * * * * * 4346 0 0 Y 47 4133 * * * 1765 * 5069 4955 * 5349 6178 * * * * * * * * 867 47 0 * * * * * * 4346 0 0 I 48 * * 3527 * * * * 6113 6688 5172 5977 2425 * 4967 961 4314 * 3977 * * 48 0 * * * * * * 4346 0 0 A 49 3175 * 5696 3605 6890 5167 * 5367 * 4770 * 5319 1123 3662 5809 3930 4966 6378 * * 49 0 * * * * * * 4346 0 0 S 50 4084 * 1160 2963 * 3755 6453 * 5002 * 6344 3431 * 4005 5543 6113 4843 * * 6579 50 0 * * * * * * 4346 0 0 R 51 * * * * * * * * * * * * * * 0 * * * * * 51 0 * * * * * * 4346 0 0 L 52 * * * * * 6313 * 3234 * 665 5363 * * 5831 * * 5248 2454 * * 52 0 * * * * * * 4346 0 0 N 53 * * * 5700 * * * 5358 * * * 457 * * 4104 6141 2684 * * * 53 0 * * * * * * 4346 0 0 I 54 * * * * 2790 * * 1557 * 2842 5852 * * * * * * 1479 * * 54 0 * * * * * * 4346 0 0 Q 55 5193 * 3247 2539 3933 6567 3220 3724 4280 4823 4784 4208 * 4826 3909 4792 4743 4424 * 4745 55 0 * * * * * * 4346 0 0 V 56 * * * * 4346 5257 5692 3098 * 2647 * * * * * * 2896 1378 * 3187 56 0 * * * * * * 4346 0 0 N 57 * * 325 * * 4725 * * * * * 3335 * 6402 * 4671 6187 * * * 57 67 4472 * 0 * * * 4346 1588 0 E 58 2492 * 2614 1917 * 3472 * * 3895 * * 5887 3678 5264 5293 3981 5217 * * * 58 61 4605 * 0 * * * 4472 1694 0 N 59 2787 * 2347 4268 * 5565 5346 * 5781 6154 * 2636 * 2893 5526 3066 3677 6175 * * 59 68 4446 * 0 * * * 4474 1646 0 N 60 6175 * 3267 4996 * 906 * * 6150 4596 4352 2826 * 6664 5069 6419 * * * 5617 60 0 * * * * * * 4474 0 0 E 61 * * * 5492 * * * 2531 3444 4737 4946 4789 * 5275 2039 * 2739 2414 * * 61 0 * * * * * * 4474 0 0 I 62 * * * * * * * 555 * 5531 * * * * * * * 1747 * * 62 0 * * * * * * 4482 0 0 I 63 3675 * * 4005 * * * 3675 3992 5333 6460 * * 5455 3497 4789 1282 3231 * 5877 63 0 * * * * * * 4352 0 0 S 64 3039 * 3401 4354 * 5047 4476 * 4353 * * 4889 * 2926 2007 2772 4320 * * * 64 0 * * * * * * 4331 0 0 A 65 2713 * * * * * * 2517 * 2801 5352 * 5963 * * * 4305 1190 * * 65 0 * * * * * * 4331 0 0 H 66 4908 * 4723 6186 * 5918 4224 * 4187 * * 4997 * * 1749 2813 2669 * 4226 3207 66 0 * * * * * * 4419 0 0 C 67 * 0 * * * * * * * * * * * * * * * * * * 67 0 * * * * * * 4353 0 0 A 68 4866 * * * * 50 * * * * * * * * * * * * * * 68 0 * * 0 * * * 4301 0 0 //