HHsearch 1.5 NAME c3v53E_ FAM FILE c3v53E_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3v53E_.a3m DATE Wed Jan 9 22:51:40 2013 LENG 102 match states, 102 columns in multiple alignment FILT 106 out of 166 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.4 EVD 0.4015 -1.5735 SEQ >ss_dssp CCHHHHHTTSCCSHHHHHTSCCCTTTCCHHHHHHTHHHHHHHHHHHHCCCCHHHHHHHHHHHHTTCCHHHHHHHHTTTSTTTHHHHHHHHHHHHHHHHHH HC >sa_dssp ECCEEBDDCCBEDDEEBCEDECCCEDCCEECCECDBBDCADCBBDECDDCCEECBEDBCDCBDEECDBDCABEDBCEEBEEDADDAACDABDBBBDCCCD DD >ss_pred CHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CC >ss_conf 9799999973899899726672787851798999999999999999708833599999999844999899999999993100799999999999999984 49 >Consensus xxxkxlxxxiPxxkxxifxxxidwxxvxxxxixxxikpWIxxkixexLGxedxlVdyixxxlxxxxxxxxlxxxLxxfLdxxaxxFvxxLWxlLifexxx xx >c3v53E_ KHIKSLIEKIPTAKPELFAYPLDWSIVDSILMERRIRPWINKKIIEYIEEEATLVDFVCSKVMAHSSPQSILDDVAMVLDEEAEVFIVKMWRLLIYETEA KK >UniRef50_D2V2K4(512-612:624) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2V2K4_NAEGR E=2e-20 s/c=0.99 id=28% cov=99% --LENIYKSLPVSTADIFAFAIDWNIVDKYHLWQSLTKFVDEGVINLTGDsEESLSQFILGKIETHSPPQEVIDDLLEIFDDQTEQFVVGLWRKLLVEMI RKQ >UniRef50_C5KUH9(512-598:618) Splicing factor, arginine/serine-rich, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5KUH9_9ALVE E=3e-08 s/c=0.69 id=24% cov=84% RQSQALLRAMPRSRNAIMAFELDWHALKEcDVLRLQLKPWLEKKLTEYFGvMEPRMLNLILERMDAETPVQQCITDLKPFLDDETEV------------- ---- >UniRef50_B0CV21(525-626:639) Predicted protein n=4 Tax=Agaricales RepID=B0CV21_LACBS E=6e-22 s/c=1.02 id=26% cov=99% ERLERIRQSVPHDKDVLFKAKVRWDGLNDTMIDRKFEPLVKRLMMKYLGemEEEDLIMFVLEHLKDHKGPQKLVEGLEPVLEEEAIELTISVWRQIIFES MA-- >UniRef50_A8J3R5(24-114:263) Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J3R5_CHLRE E=1e-10 s/c=0.75 id=22% cov=85% KTLKELVKSgkVPKE----LDLKVDMKKVN----WPVMKEWIAKRVTQLLGglEEEVLIGMVYNFLEDpEMSGKMLYVNLLPFLEKNTSLFCKELWLLL- ------- >UniRef50_A8P8R5(5-72:793) Putative uncharacterized protein n=1 Tax=Brugia malayi RepID=A8P8R5_BRUMA E=0.001 s/c=0.66 id=21% cov=66% ----------------------------SAEVSKKIRAAIKAKLEE-LGvyVDEELPDYIMVMIANKKEKTQMKEDLLLFLGKNSERFVEWLFD--IFE- ---- >UniRef50_C5K9W9(423-525:575) Annexin A7, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5K9W9_9ALVE E=4e-19 s/c=0.93 id=23% cov=99% --IHELMSLVPSERSDIYRHPIDWDYVlsQSTTVQQTLWTWVRRQVSLWLGsPDRELTDWIMRMVNRRTDAPDLARELRVVIDEEADAFVEQLYRILVFE TLRKQ >UniRef50_B9WH43(29-118:210) PWI domain mRNA processing protein, putative (Pre-mrna processing protein, putative) (Splicing co-activator, putative) n=5 Tax=Candida RepID=B9WH43_CANDC E=1e-07 s/c=0.64 id=21% cov=62% ---------------------------------EKFKPWITEEINKQLPdddiiidyIYELLQDYGNETGKEFPDILNINLQLTDFLgEKESRVFCKQLW SLIL------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * 2944 * * * * 1464 * * * * * 979 * * * * * 1 0 * * * * * * 3401 0 0 H 2 * * * * * * 2301 * 3075 * * * * 2793 1281 * 3027 * * * 2 0 * * * * * * 3611 0 0 I 3 * * * * * * * 1959 * 1239 * * * 4358 * 3714 * 2364 * * 3 0 * * * * * * 4228 0 0 K 4 3570 * * 3446 * * 4252 4467 836 * * * * 3488 3701 * * * * * 4 0 * * * * * * 5020 0 0 S 5 2531 * 5509 3067 * * * * 2011 * * 4468 * 2374 3111 3579 * * * * 5 0 * * * * * * 4895 0 0 L 6 * * * * * * * 1384 * 782 4823 * * * * * * * * * 6 0 * * * * * * 4946 0 0 I 7 4929 * * * 4824 * * 1815 * 2179 2866 * * * 4613 * 4674 3163 4113 4632 7 0 * * * * * * 4979 0 0 E 8 3518 * 3682 1406 * * * * 2971 * * * * 2416 4712 3261 * * * * 8 0 * * * * * * 4988 0 0 K 9 4750 * * 4352 * 4388 * 5564 2450 4601 5207 * * * 3118 1636 2673 * * * 9 111 4770 4745 1000 1000 * * 4975 1000 0 I 10 * * * * * * * 1252 * 2885 3028 * * * * * * 1634 * * 10 183 * 3072 * * * 0 4913 0 1000 P 11 * * * * * * * * * * * * 57 * * 4680 * * * * 11 117 * 3678 * * 2020 408 4734 0 2119 T 12 4226 * * * * * 4660 * 2258 4777 * 3933 4743 * 3513 3294 2081 2912 * * 12 55 4743 * 1585 585 903 1104 4772 1000 2789 A 13 3307 * 2796 2231 * 4869 5480 * 4774 * * 3141 * * * 2365 2999 5941 * * 13 49 * 4918 * * 0 * 5012 0 1658 K 14 4208 * * 4015 4834 * * * 1206 * * 4981 * * 2182 4888 4884 * 3383 * 14 0 * * * * * 0 5087 0 1000 P 15 4176 * 2532 1606 * 3810 * * * * * 4378 3135 * 4452 3301 3992 * * * 15 0 * * * * * 0 5087 0 1000 E 16 3199 * 2219 1825 * 3921 5272 * 3144 * * * * 4267 * 3231 * 5029 * * 16 0 * * * * * 0 5258 0 1000 L 17 * * * * * * * 988 5061 1454 * * * * * * * 3308 * * 17 0 * * * * 0 * 5280 0 1000 F 18 * * * * 547 * * * * 3363 5272 * * * * * * * 3142 3661 18 0 * * * * * * 5452 0 0 A 19 2227 * 3178 3645 * 4179 * * 2846 4989 * 2466 * * 4564 3365 * 4919 * 5893 19 0 * * * * * * 5452 0 0 Y 20 3867 * * 4022 2692 * 3454 4775 2938 4640 * * 5730 3798 3891 5952 5324 5913 4760 2608 20 0 * * * * * * 5452 0 0 P 21 2904 * 4798 3448 * * * * 1655 * * 5356 2371 5336 4310 3433 4799 * * * 21 0 * * * * * * 5460 0 0 L 22 * * * * 5356 * * 1299 * 2857 * * 4051 * * * * 1431 * * 22 0 * * * * * * 5460 0 0 D 23 4799 * 895 3349 * * * * 3572 * * 2484 * 5356 5218 6137 * * * * 23 26 * 5791 * * * * 5460 0 0 W 24 * * * * 3938 * * 3214 * 4228 2654 * * * * * 5343 5288 825 * 24 19 6235 * 2322 322 0 * 5456 1000 1000 S 25 4328 * 2441 3504 * 5730 4595 * 3858 * * 2590 5838 4241 6185 2569 2944 * * * 25 0 * * * * * * 5513 0 0 I 26 4563 * * * 5930 5310 5876 3364 1820 3403 4451 4709 * 4652 3693 5838 4975 4003 * 3166 26 0 * * * * * * 5513 0 0 V 27 * * * * 4405 * * 3594 * 2562 * * 5806 * * * 5967 742 * 3862 27 167 3197 * 921 1083 * * 5487 2679 0 D 28 * * 1417 3965 4198 5823 * * 4970 * * 1674 4488 3958 * 6027 5656 * * * 28 52 5806 5846 0 * * * 5487 1000 0 S 29 3604 * 3456 3153 4942 6015 * 3942 2853 2490 4940 5201 * * 4663 3281 4503 4697 * * 29 133 4812 4246 439 1930 * 0 5488 1667 1000 I 30 2568 * 2700 4370 * 5765 * 4055 5969 * * 3174 4137 4199 * 3328 2406 * * 5367 30 55 5567 5940 0 * * 0 5589 1000 2212 L 31 * * * 4491 5997 * 4229 2770 3279 1981 5405 4225 * * * 4254 4467 2375 5960 * 31 157 5728 3566 4644 59 * 0 5551 1000 2473 M 32 * * 5313 * * * * 1552 * 2030 3121 * * * * * 5043 2037 * * 32 69 * 4420 * * 3359 148 5463 0 3099 E 33 3914 * 3387 2636 * 4686 5623 * 3381 * * 2749 * 3775 4490 2752 5269 * 4427 4838 33 207 3987 3830 0 * 1777 498 5430 1798 3363 R 34 * * 2546 2079 * * * 5926 2684 4847 5198 6192 5825 3179 3182 4054 4446 * * * 34 194 * 2992 * * 1715 524 5420 0 3833 R 35 3682 * * 4535 * * * * 1879 4329 * 5323 * 3682 2970 3049 3551 3051 * * 35 39 5221 * 1861 465 1808 485 5466 1435 3989 I 36 5740 * * * 3429 * * 1720 * 1661 2629 * * * * * * 3555 * 5508 36 0 * * * * 3297 155 5433 0 3747 R 37 * * * 4066 * * * * 1031 * * * 5668 5263 1548 * 4781 * 5222 * 37 0 * * * * 1944 434 5434 0 3714 P 38 3560 * * 4061 * 5422 * * 3562 * * * 864 6175 3635 4343 4202 * * * 38 28 5719 * 2585 263 0 * 5509 1131 3207 W 39 5062 5706 * * 3750 * * * 4490 6145 6400 * * * 5995 * 5591 * 470 4389 39 0 * * * * * * 5542 0 0 I 40 5799 * * * * * * 816 * 3683 6283 * * * * * * 1629 * * 40 0 * * * * * * 5566 0 0 N 41 2798 * 3257 3293 * 4714 5634 6708 3585 5981 * 4379 * 5000 3246 3269 2808 5385 * 5188 41 0 * * * * * * 5566 0 0 K 42 4089 * 3334 2412 * 4482 * * 1714 * 6512 4880 * 5868 3214 3536 4367 * * * 42 0 * * * * * * 5566 0 0 K 43 * 5492 * 3737 6063 4917 * * 1352 3431 * 5956 * 3643 2271 * 3901 * * * 43 0 * * * * * * 5566 0 0 I 44 * 5899 * * 6027 * * 1435 * 2561 4523 * * * * 5982 5521 1525 * * 44 0 * * * * * * 5565 0 0 I 45 5098 6680 6067 3060 * * * 2947 4412 6743 4253 3477 * 3690 4883 3828 2030 3810 * * 45 0 * * * * * * 5565 0 0 E 46 4369 * 2908 990 * 5881 * * 3254 5541 * 4595 * 3818 5057 5580 6901 * * * 46 19 * 6293 * * * * 5591 0 0 Y 47 * * * * 3060 * 5362 2449 * 1962 6514 * * 5091 * 4728 * 5671 5536 1753 47 0 * * * * 0 * 5584 0 1000 I 48 * * * * 4283 6126 * 2901 * 552 3655 * * * * * 4674 * * * 48 49 4914 * 0 * * * 5591 2073 0 E 49 5377 * * 4604 * 323 * * 6198 * * 4870 3819 5906 * * * * * * 49 743 1313 * 443 1919 * * 5591 4945 0 E 50 5583 6267 2786 1504 3272 6301 * 4900 4369 * 4504 3963 5045 4941 * * 6449 5354 * 3972 50 209 3055 6080 290 2455 * * 5591 3657 0 E 51 * * 1232 946 * * * * 5966 * * * * * * 5690 * * * 5657 51 69 4428 * 896 1112 * 0 5873 2115 1000 A 52 5734 * 977 1866 * * * * * * * 5374 3492 4360 4749 * * * * * 52 91 4037 * 653 1458 0 * 5873 2889 1000 T 53 * * 2369 2176 5448 5923 * 2860 5931 5045 6673 * * * 6024 3511 3248 2803 * * 53 54 4755 * 801 1231 * * 5902 2228 0 L 54 5998 * * 5931 4242 * * 3141 * 1006 4653 * * * * * * 1921 * * 54 0 * * * * * * 5902 0 0 V 55 5088 5781 * * * * * 1936 * 5397 * * 4190 4684 * 4942 4412 1029 * 7891 55 244 2682 * 1284 763 * * 5902 3470 0 D 56 5469 * 1165 1994 * 6524 * 5854 6208 * 6517 3093 * 6425 6330 5050 4621 5986 * * 56 13 6771 * 2000 415 * * 5902 1000 0 F 57 4248 * * 4635 1697 * * * * 3846 4902 * * * * * 6681 4086 5733 1292 57 0 * * * * * * 5902 0 0 V 58 4086 3609 * * 4506 5664 * 1175 * 4007 * * * * * * 5008 1948 * * 58 0 * * * * * * 5902 0 0 C 59 5065 3595 * 4532 3230 6486 * 3139 * 2393 3408 4539 * * * 6224 * 2498 * 3399 59 31 5570 * 2221 348 * * 5902 1590 0 S 60 7160 * 3156 1842 5854 3588 5367 5989 3592 6144 * 3105 * 6074 5733 3308 5821 3642 * 5986 60 0 * * * * * * 5902 0 0 K 61 4877 5998 * 4944 5600 * 3311 * 3240 2617 2685 3597 * 2365 3938 * 5054 * * * 61 0 * * * * * * 5902 0 0 V 62 5844 6360 6427 * 5923 5664 6845 2322 * 1018 6024 * * 7120 * 6074 6591 2538 * * 62 119 3659 * 2716 238 * * 5902 2968 0 M 63 4544 * 4418 2111 5811 4164 * 6463 3191 3418 5576 5191 * 3778 2808 4649 4755 4324 * * 63 63 4549 * 2408 301 * * 5902 2126 0 A 64 4279 * 3067 1813 * 5564 5271 6360 3112 5777 * 2658 6729 4639 5115 4105 5332 5550 * 6600 64 113 3730 * 1850 469 * * 5902 2585 0 H 65 5751 * 3974 2701 5679 3209 2299 * 3096 * * 3702 * 4506 2718 4927 * * * 6564 65 173 3147 * 1550 603 * * 5762 2669 0 S 66 4683 * 6371 5311 * 5680 6228 5652 2899 3806 6539 4733 1730 4679 4198 4097 3319 3974 * * 66 110 3763 * 2256 339 * * 5762 2999 0 S 67 5361 6557 1540 4258 * 4217 * * 3697 * * 3512 3996 5549 4871 2585 4086 * * 7235 67 0 * * * * * * 5762 0 0 P 68 2640 6671 * 6957 * 4105 * 3201 2840 * 6444 6489 1304 * 4327 5473 * 6039 * * 68 29 5644 * 2994 194 * * 5762 1437 0 Q 69 3816 * 4480 3460 * 6515 6612 * 1796 4974 * 6663 5710 2257 3080 4309 5242 5707 * * 69 14 6671 * 1000 1000 * * 5762 1000 0 S 70 3353 * 3411 1994 * 6744 4791 * 3094 5111 5114 4338 * 2914 4269 4275 5288 6092 * 6527 70 0 * * * * * * 5762 0 0 I 71 4296 6039 * * 5624 * * 2071 * 1414 2234 * * * 7368 * 5815 3964 * * 71 0 * * * * * * 5762 0 0 L 72 3605 * 6527 5704 * * 4424 2613 5410 2548 * 4514 * 1969 * 5487 * 2913 * 5105 72 0 * * * * * * 5762 0 0 D 73 4704 * 3124 3009 * 6655 * 2130 3612 3323 * 3951 * 5934 4818 3492 4368 4358 * * 73 0 * * * * * * 5762 0 0 D 74 5219 * 2395 2139 * 5722 * * 5251 6592 * 2759 * 1965 6525 4176 6452 5719 * * 74 26 5829 * 0 * * * 5762 1000 0 V 75 5147 * * * * * * 3451 * 499 4562 * * * * * 5624 3182 * * 75 0 * * * * * * 5762 0 0 A 76 3409 6444 5401 2288 * 6452 * * 3437 4508 5319 6550 * 3907 3932 4973 1840 4976 * 7087 76 0 * * * * * * 5762 0 0 M 77 5873 * 4015 2712 * 1638 * 6906 3794 3905 4539 6018 3001 5521 7141 5481 6445 4213 * * 77 0 * * * * * * 5762 0 0 V 78 5022 * * * 655 * * 3533 * * * * 6228 * * * 3828 2745 * 6092 78 23 5995 * 4807 52 * * 5762 1000 0 L 79 * * * * 3406 * * 3936 * 304 5035 * * * * * * * * * 79 119 3657 * 0 * * * 5762 2792 0 D 80 4323 * 1160 2438 * 2714 * * 5078 * * 3890 * 6098 * 5160 5265 * * * 80 117 3680 * 0 * * * 5762 2833 0 E 81 6993 * 2252 1644 * 4959 * * 1966 * * 4633 * 5417 5296 3932 6975 6445 * * 81 63 4553 * 0 * * * 5762 2270 0 E 82 * 7087 1627 1764 * 6098 6957 * 4036 * * 2494 * 3904 5115 5815 * * * * 82 18 6348 * 0 * * * 5762 1000 0 A 83 1121 * * * * 3690 * * * * * 6399 * * * 2375 1953 * * * 83 0 * * * * * * 5762 0 0 E 84 2953 * 4062 1744 * 4911 * 4578 4420 4255 6501 5818 3864 6834 2881 4431 5731 5004 * * 84 0 * * * * * * 5762 0 0 V 85 3217 * 4017 3478 * 4979 * 4317 2895 6539 5195 4999 3696 3862 5567 4201 3546 2753 * * 85 0 * * * * * * 5762 0 0 F 86 * * * * 231 * * 4313 * 4169 * * * * * * * 4574 * * 86 0 * * * * * * 5735 0 0 I 87 5412 2576 * * * * * 3509 * 6292 3015 * * * * 5981 4124 968 * * 87 0 * * * * * * 5733 0 0 V 88 4207 * 3342 2796 * 4809 * 3530 2363 3895 6721 6496 * 4366 4805 3587 4374 3589 * * 88 0 * * * * * * 5577 0 0 K 89 5132 * 3527 1836 * 5251 * * 2661 * * 4024 * 2943 3724 4551 5604 * 3477 * 89 0 * * * * * * 5557 0 0 M 90 * * * * * * * 4132 * 337 3620 * * * * * * 3835 * * 90 0 * * * * * * 5557 0 0 W 91 * * * * 4935 * * * * 6227 * * * * * * * * 241 3211 91 20 6190 * 0 * * * 5550 1000 0 R 92 5084 * 3074 2772 * * * * 2738 4628 * 4105 6958 4506 1544 4012 * * * * 92 39 6328 6112 2000 415 * * 5411 1000 0 L 93 4470 * * * 5398 * 3381 4216 4956 848 2918 * * 5254 * * * 5859 * 5819 93 0 * * * * * 0 5396 0 1000 L 94 * * * * * * * 2804 * 463 3905 * * * * * * 3956 * * 94 32 5500 * 1000 1000 0 * 5372 1000 1000 I 95 * * * * 6036 * * 1085 * 1332 * * * * * * * 3481 * 5246 95 0 * * * * * * 5097 0 0 Y 96 * * * 4386 886 * * * * 4649 * * * * * 4606 * 3480 * 2056 96 0 * * * * * * 4605 0 0 E 97 3372 5118 4433 551 4885 * 4645 * * * * * * * 4576 * * 5055 * * 97 0 * * * * * * 4573 0 0 T 98 * * * * * 4561 * 3070 * * 4181 * * 3119 * 1715 1459 * * * 98 0 * * * * * * 4320 0 0 E 99 4782 * * 1444 * * * 2609 4613 2027 4157 * * 3476 * * * * * * 99 0 * * * * * * 4262 0 0 A 100 1229 * * 4552 * * * * 4432 * * 4001 * * 1999 2541 * * * * 100 0 * * * * * * 4067 0 0 K 101 3768 * * 2850 * * * * 1100 * * * * 3598 2067 * * * * * 101 0 * * * * * * 3661 0 0 K 102 * * * * * * * * 665 * * * * 1786 3661 * * * * * 102 0 * * 0 * * * 3415 0 0 //