HHsearch 1.5 NAME c3skjF_ FAM FILE c3skjF_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3skjF_.a3m DATE Wed Jan 9 20:00:04 2013 LENG 84 match states, 84 columns in multiple alignment FILT 50 out of 54 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.1 EVD 0.4426 0.9096 SEQ >ss_dssp CEEEEEEETTEEEEEEEECCCSSCCCCCCCCCEEEEBCGGGSTTCTTTCCSCCCCCCSSCBCHHHHHTTCCCCEECCCEEEEEC >sa_dssp DEDDEDDCEEEECEBDCCDDBEEDEDEDEDEDDABACCCECCEEAEECBECDCEDDCEDCBDDDCDEEDDDCDBEEDBBBCCDE >ss_pred CCHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEHHHEEEEEEC >ss_conf 921110027871478984217899876359999997622328898776742012310022222632113589831222566539 >Consensus WeevsxxdxxxxirtyqVCxvxxxxqnNWLRlkFtvRdCxsxpxxxxtCKETFniaxdesfxxxxlxxrxxxlxxgACxalxsv >c3skjF_ WDLMQNIMNDMPIYMYSVCNVMSGDQDNWLRLKFTVRDCNSFPGGASSCKETFNIAPDEITVSSDFEARHVKLNVEACVALLSV >UniRef50_Q4SUM3(25-145:1173) Ephrin receptor (Fragment) n=5 Tax=Tetraodontidae RepID=Q4SUM3_TETNG E=7e-17 s/c=0.73 id=46% cov=93% WEEVSGYDENMnTIRTYQVCNVFDASQNNWVRtkyirrrgaqrihvqMKFSVRDCSSIPNVPGSCKETFNlyyyesdsdtasgsspawmenpwvkvdtIA ADESFSQVDLGGRIMKINSEV------- >UniRef50_O15197(41-210:1006) Ephrin type-B receptor 6 n=31 Tax=Theria RepID=EPHB6_HUMAN E=1e-12 s/c=0.44 id=35% cov=101% WDEVSVLDDQRRLtRTFEACHVAGAppgtGQDNWLqthfverrgaqrahiRLHFSVRACSSLGVSGGTCRETFtlyyrqaeepdspdsvsswhlkrwtkv dTIAADESFpsssssssssssaawavgphgagqraglqlnvkerSFGPLTQRGFYVafqDTGACLALVAV >UniRef50_UPI0000E468CF(61-122:273) PREDICTED: similar to Ephrin type-B receptor 2 precursor (Tyrosine-protein kinase receptor CEK5), partial n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E468CF E=0.0006 s/c=0.73 id=39% cov=49% -------------RIFQTCHVSDP-RDNWLRMpyierqganrihvevKFTMYSCTGIVDAQL-CKETFDV----------------------------- >UniRef50_A4FUN2(51-193:293) LOC100000756 protein n=4 Tax=Euteleostomi RepID=A4FUN2_DANRE E=5e-16 s/c=0.60 id=33% cov=100% WEEVSGLDEENNsVRTYQICQ-ADGSSSHWLRSKlierrgasqvyvelfFTMVECSSRNTHHRSCKETFNLYYYQSDTddatathpawmenpytkvdtva adfllrkggekkvnvktlrLGPLSKRGFYLafqAQGACMALLSV >UniRef50_B7QJ81(25-164:902) Eph receptor tyrosine kinase, putative n=1 Tax=Ixodes scapularis RepID=B7QJ81_IXOSC E=3e-14 s/c=0.57 id=45% cov=65% -ESFTNFEQGINWRSYVVCDVAYENVNNWLwtpfiergpahriyiELKFSMRDCNLFPGMALSCKETFSL----------------------------- >UniRef50_Q4H3M3(62-145:1085) Ephrin receptor like protein n=1 Tax=Ciona intestinalis RepID=Q4H3M3_CIOIN E=0.001 s/c=0.53 id=32% cov=63% WDEVTFHQLNPSVRGFQICPDSQDTQSyktnvqNWLRspymkligrsrlyveLNFWMRECENKDTI---CPETFKI------------------------ ----- >UniRef50_Q4H3M4(56-197:1048) Ephrin receptor n=1 Tax=Ciona intestinalis RepID=Q4H3M4_CIOIN E=2e-17 s/c=0.64 id=37% cov=90% --------DGRDRRMLVVCQIKKPHQNNWARtpyipvdgaeriyveFEFTIRSCEDVPNVA-TCKETFNLYYYETDrdeatstfppwregayikvdtiaa dkrfkpgsaernfetrDIGPLTKRGVYLaiqDTGACMALMHV >UniRef50_UPI00017B4565(55-188:992) UPI00017B4565 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B4565 E=1e-16 s/c=0.65 id=46% cov=96% WEVVQKTLNGSQLYTYSVC-VDEREQDNWLRttfiqrrpsasrvfveLKFIVRDCNFFDSSSLTCKETFNLFTSESDadvgttfrkgqfrkvatiapdei sktdlrintdtrVVENLSRKGFYLafqDIGACIAL--- >UniRef50_UPI000180BA0B(41-185:994) PREDICTED: similar to Eph receptor B3 n=1 Tax=Ciona intestinalis RepID=UPI000180BA0B E=2e-14 s/c=0.55 id=28% cov=101% WEEVSSYDEGhrTTIRSYQVCPQEDTtvESDNWIRspyidardgklihldVEFSINHCShdTLPDNMkkTQCKETFNMFYYEAdgdvatstfppwrekpy vkidtiaansvnrvntktFSFGPITRRGFYVsvqDQGACMSLISL # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * W 1 * * * * * * * * * * * * * * * * * * 0 * 1 0 * * * * * * 3165 0 0 D 2 * * 1773 850 * * * 5051 * * * * * * * 3527 4803 * * * 2 0 * * * * * * 3214 0 0 L 3 4062 * * 552 * * * 3640 * 4833 * * * * * 3286 * 4631 * * 3 0 * * * * * * 3214 0 0 M 4 * * * * 3720 4737 * 2634 * 3237 4833 * * 4504 * * * 888 * * 4 0 * * * * * * 3214 0 0 Q 5 * * * * * 5731 * * * * * 4174 * 2045 * 1046 2327 * * * 5 0 * * * * * * 3214 0 0 N 6 * * 5389 3246 4148 1883 * 5258 4631 * * 2707 * 3009 * 4389 4549 3196 * * 6 0 * * * * * * 3214 0 0 I 7 4737 * * * 3720 * 3438 3659 * 1920 2959 * * * 4886 * 4631 2930 * 3095 7 138 3452 * 371 2140 * * 3214 1595 0 M 8 * * 763 3503 * * * 4552 * 3566 4833 * * 4148 * * * 3265 * * 8 58 4662 * 0 * * * 3214 1000 0 N 9 * * 1986 1738 * * 5011 * 4407 4175 * 2027 * 4590 * * 5195 * * * 9 232 2751 * 0 * * * 3338 2044 0 D 10 * * 3745 2879 * 1228 * * * 5909 * 2568 * 4800 * 3485 * * * 4265 10 220 2819 * 325 2309 * * 3338 1883 0 M 11 3740 * * * * * 5195 3524 4707 * 3794 3375 4175 4168 2526 3134 2282 * * * 11 103 3863 * 0 * * * 3338 1637 0 P 12 * * 3689 * * * * * * 3124 * 2765 1530 3813 4800 3544 3040 * * * 12 110 3765 * 0 * * * 3338 1301 0 I 13 * * * * * * * 1228 * 2449 * * * * 4378 * * 2134 3766 4624 13 53 4800 * 0 * * * 3338 1000 0 Y 14 * * * * * * 3577 * * * * * * * 470 * * * * 2365 14 0 * * * * * * 3305 0 0 M 15 * * * * * 4270 * 4861 * * 2554 5053 * * 5298 2772 984 * * 4796 15 0 * * * * * * 3305 0 0 Y 16 * * * * 2130 * 4796 * * 3738 * * * * * * * * * 598 16 0 * * * * * * 3305 0 0 S 17 * * * 2770 5060 * * * * * * * * 760 * 3433 * 3179 * 5053 17 0 * * * * * * 3305 0 0 V 18 4778 * 3806 * * * * 2723 * * * * * * * * 4861 502 * * 18 0 * * * * * * 3305 0 0 C 19 * 0 * * * * * * * * * * * * * * * * * * 19 25 * 5847 * * * * 3305 0 0 N 20 * * 3374 * * * 3213 * * * * 1312 2899 2927 4289 4786 4643 * * * 20 51 * 4839 * * 0 * 3304 0 1000 V 21 * * 4202 * 5244 * * 2867 * * 3889 * 4554 4380 * * 4764 768 * * 21 55 4751 * 0 * 0 * 3266 1247 1000 M 22 2625 * 3030 3738 4643 3855 * * 4475 4125 2825 4618 * 3865 4490 3263 5060 * * * 22 52 4809 * 0 * * * 3305 1256 0 S 23 * * 2824 2162 * 4778 * * 3736 * 4796 5298 * 2789 3531 2593 * * * 3933 23 106 3821 * 668 1432 * * 3305 1490 0 G 24 4291 * 3510 4478 * 2738 5006 * * * * 5458 1256 6117 3196 5299 4480 * * * 24 177 3621 4861 1528 614 * * 3305 1468 0 D 25 4603 * 3037 2429 * 2976 3832 * * * * 2007 * * * 2718 4234 * * * 25 103 5199 4594 0 * 0 * 3255 1000 1000 Q 26 * * * * * * * * * * * * * 444 4777 3555 3723 3885 * * 26 0 * * * * 0 * 3252 0 1000 D 27 5059 * 1332 * * * * * * * * 1163 * * * 2988 * * * * 27 77 4270 * 2585 263 * * 3305 1000 0 N 28 * * * * 4666 * 2875 * * * * 279 * * * * * * * * 28 0 * * * * * * 3305 0 0 W 29 * * * * * * * * * * * * * * * * * * 0 * 29 0 * * * * * * 3305 0 0 L 30 4475 * * * * * * 4480 * 218 * * * * * * * 4304 * * 30 341 2248 * 3907 100 * * 3305 2243 0 R 31 * * * 3268 * * * * 5481 * * * * 5918 292 * 4618 * * * 31 1779 497 * 3931 98 * * 3305 2995 0 L 32 * * * * 4475 * * 2206 * 980 3527 * * * * 4845 * 3189 * * 32 51 4861 * 3907 100 * * 3305 1000 0 K 33 * * 5298 2991 * * 3922 * 1277 * * 4270 * 2999 2371 * * * * * 33 51 4845 * 3907 100 * * 3305 1000 0 F 34 * * * * 0 * * * * * * * * * * * * * * * 34 0 * * * * * * 3305 0 0 T 35 * * * * * * * 4939 * * * 5053 * * * 1531 991 4790 4270 * 35 0 * * * * * * 3305 0 0 V 36 * * * * * * * 2723 * 2673 1889 * * * * * 5458 1326 * * 36 0 * * * * * * 3305 0 0 R 37 * * * * * * * 4666 * 5059 4796 4480 * * 357 * * 4845 * 4861 37 0 * * * * * * 3305 0 0 D 38 4778 * 766 2619 * * 4480 * 4796 * * * * * * 2924 * * * * 38 0 * * * * * * 3305 0 0 C 39 * 0 * * * * * * * * * * * * * * * * * * 39 0 * * * * * * 3305 0 0 N 40 3437 * 5481 2619 * * * * 3806 5059 * 1844 * * 5591 1933 4861 5298 * * 40 66 4480 * 1000 1000 * * 3305 1000 0 S 41 * * 3046 4796 5847 4138 * * * 3933 * 4270 * * 4666 997 3170 * * * 41 53 * 4796 * * * * 3305 0 0 F 42 * * * * 1910 * * 2055 4200 2273 3096 * * * 4804 * * 3658 * * 42 61 * 4593 * * * 0 3256 0 1000 P 43 * * 2937 4970 * 4628 * * 4708 * * 4660 783 * 3324 * * 4708 * * 43 0 * * * * * 0 3200 0 1403 G 44 4970 * 3510 * * 1369 * * * 6252 * 2791 * * 4386 3443 2957 4628 5230 * 44 41 * 5146 * * 891 1118 3200 0 1403 G 45 3076 * * 4756 * 3679 4764 3642 * * 5316 2899 4568 * * 3768 * 1417 * * 45 158 * 3273 * * 794 1241 3235 0 1369 A 46 1438 * * * * 3705 4660 * * 3699 4035 * 3217 3510 * 2839 6214 5157 * * 46 216 4331 3484 1000 1000 991 1009 3110 1000 2023 S 47 * * * * * 1525 * * * 2346 * * 4568 * 3153 3804 4307 2482 * * 47 121 4484 4812 1000 1000 869 1144 3178 1091 1783 S 48 4627 * * * * 4627 4386 * * * * 4874 * 4275 * 1599 1135 * * * 48 0 * * * * 0 * 3079 0 1741 C 49 * 0 * * * * * * * * * * * * * * * * * * 49 0 * * * * * * 3305 0 0 K 50 * * * * * * * * 330 * * * 4270 * 2712 * * * * * 50 0 * * * * * * 3305 0 0 E 51 * * * 0 * * * * * * * * * * * * * * * * 51 0 * * * * * * 3305 0 0 T 52 * * * * * * * * * * * * * * * * 0 * * * 52 0 * * * * * * 3305 0 0 F 53 * * * * 60 * * * * 4618 * * * * * * * * * * 53 107 3806 * 4807 52 * * 3305 1358 0 N 54 * * 3533 * * * * * 4177 * * 656 * * * 4764 2418 * * * 54 789 1248 * 4673 58 * * 3234 2406 0 I 55 * * * * * * * 1087 * 1650 4341 * * * * * * 2631 * * 55 0 * * * * * * 3227 0 0 A 56 616 * * * 2682 * * * * * * * * * * * * * * 2384 56 0 * * * * * * 2982 0 0 P 57 1071 * * * * * * * * * * * 2503 * * * 5086 * * 1653 57 0 * * * * * * 2982 0 0 D 58 5574 * 616 * * * * * 4603 4683 * * * * * 5086 * * * 2204 58 40 5175 * 3170 170 * * 2982 1000 0 E 59 * * * 368 * * * * * * * * * 2798 3620 * * * * * 59 30 5597 * 5044 44 * * 2982 1000 0 I 60 3497 * * * * * * 3543 * * * 5175 * * * 515 4383 4310 * * 60 70 4399 * 5129 42 * * 2982 1000 0 T 61 * * 1937 * 827 * * * * * * 4683 * * * 4055 3717 * * * 61 438 2081 5283 4765 54 * * 2982 2071 0 V 62 4710 * 5279 5164 * * 4670 * 5577 * * 5466 * * 5858 1766 1340 3069 * * 62 180 3095 * 5256 38 * 0 2970 1621 1000 S 63 * * * 5579 3288 4879 * 3239 * 3194 4670 4196 * 1846 * 5230 5164 2315 * * 63 30 5605 * 4087 87 * 0 2970 1000 1000 S 64 5819 * 4692 4214 * 1358 * * * 4451 4923 4670 * * 2461 5230 5575 2715 * * 64 0 * * * * * 0 2970 0 1000 D 65 * * 1068 3911 * * * * * * * 3139 1543 * * * * * * * 65 133 4357 4670 4087 87 * 0 2970 1179 1000 F 66 5219 * * * 3842 * * 2670 * 514 * * * * 5172 * * 5784 * * 66 0 * * * * 1040 961 2887 0 1490 E 67 4911 * * 3028 * 1712 5236 * * * * * * * * 1810 2137 * * * 67 43 5088 * 1585 585 0 * 2929 1000 1000 A 68 5288 * 3252 4442 * 3222 * * 2134 * * * * 4749 1491 4009 * 4907 * * 68 0 * * * * * * 2982 0 0 R 69 4145 * * * * 3969 5522 5225 2817 * * 5442 * * 586 * * * * * 69 31 5543 * 3000 193 * * 2940 1000 0 H 70 5013 * * * * 889 5247 3520 4374 5730 * 5225 * * 4868 3761 * 3137 * * 70 0 * * * * * * 2940 0 0 V 71 * * * * 1266 * * 4492 * 2461 2388 * * * * * 5225 2832 * * 71 0 * * * * * * 2940 0 0 K 72 * * * * * * * * 1556 * * * * 5013 3491 * * * * 889 72 0 * * * * * * 2940 0 0 L 73 * * * * * * * 4672 * 377 5220 * * * * * * 2607 * * 73 1207 819 * 1859 465 * * 2940 2674 0 N 74 4396 * 1090 * * * * * * * * 1050 * * * * * * * * 74 0 * * * * * * 2940 0 0 V 75 * * * * * * * 2789 * 4417 5276 * 5334 2752 * 3847 1144 3515 * * 75 148 3362 * 4322 74 * * 2845 1588 0 E 76 * * * 1724 * 520 * * * * * * * * * * * * * * 76 271 2547 * 4322 74 * * 2845 1659 0 A 77 163 * * * * * * * * * * * * * 4894 * * 3773 * * 77 0 * * * * * * 2845 0 0 C 78 * 0 * * * * * * * * * * * * * * * * * * 78 0 * * * * * * 2812 0 0 V 79 * * * * * * * 2216 * 3497 1454 * * * * * * 1594 * * 79 0 * * * * * * 2742 0 0 A 80 318 * * * * * * * * * * * * * * 2337 * * * * 80 0 * * * * * * 2742 0 0 L 81 * * * * * * * 2858 * 279 4730 * * * * * * * * * 81 0 * * * * * * 2742 0 0 L 82 * * * * * * * 3146 * 1693 2925 * * * * * 4634 1458 * 4581 82 0 * * * * * * 2730 0 0 S 83 3168 * * * * * 2925 * * * * * * * * 402 * * * * 83 0 * * * * * * 2730 0 0 V 84 * * * * * * * * * 2681 * * * * * * * 245 * * 84 0 * * 0 * * * 2703 0 0 //