HHsearch 1.5 NAME c3pt3A_ FAM FILE c3pt3A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3pt3A_.a3m DATE Sat Jan 28 16:41:38 2012 LENG 88 match states, 88 columns in multiple alignment FILT 108 out of 855 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.6 EVD 0.4104 -0.5398 SEQ >ss_dssp CCEEEECSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHSCCCEEEEESCCTTSCCEEETTTTEEEEECCSSHHHHHHHHHHHHC >sa_dssp ECDCCDDBECEEEDBEDACECACBBCEEBDEECDEDBDECBCDDEEBAAADDDDDEDDBDDDDEDCCACABBAECDECAEECACECBD >ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHC >ss_conf 9101578887702355899999999962999999999988528998507718874418478863117873899899999999998709 >Consensus xxxxxxexxxxxxxxxxxixxFwxvlxxxtxxexxxfLxFxTGsxxxxxxxxxxxxxLPxaxTCfnxLxLPxYssxexlxxkLxxAIe >c3pt3A_ FTSFNDESGENAEKLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPPSITIRPPDDQHLPTANTCISRLYVPLYSSKQILKQKLLLAIK >UniRef50_D0MWP8(562-658:670) HECT E3 ubiquitin ligase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MWP8_PHYIN E=3e-11 s/c=0.72 id=28% cov=86% ----------TKEEQNGVLEWFWIVVEGLAPDERAKLLQFVTGTSRVpvegfrglmsssgiiheftiqfVSRGKEKSDLSPKAHTCFNRLDLPMYRDMEE LETYLTM--- >UniRef50_A2F794(2865-2957:2978) Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2F794_TRIVA E=1e-11 s/c=0.76 id=28% cov=77% --------------------MLWKVIESFTPNERMLFIKFATGRmglpSPGMSWHSsltitwlplqgrtDENAELPTAQTCSSTIKIPRYTTEESMAKKI RTAI- >UniRef50_Q4RYB4(763-856:865) Chromosome 3 SCAF14978, whole genome shotgun sequence. (Fragment) n=4 Tax=Deuterostomia RepID=Q4RYB4_TETNG E=1e-23 s/c=1.18 id=29% cov=95% ----TTEYDGGYNRDSRIIKEFWETLHSFGEEQKRLFLQFTTGTDrapvgglgklkMIIAKNGPDTDRLPTSHTCFNVLLLPEYSSKEKLRERLLKAI- >UniRef50_C3ZL75(4263-4316:4443) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZL75_BRAFL E=2e-08 s/c=1.11 id=27% cov=58% -----------------HIEFFWSSLESFSQDQLRKFVKFACNQERIPCTCPCKDGGPDTAH-------VPPYP-------------- >UniRef50_UPI000023D78F(1113-1157:1188) hypothetical protein FG06272.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023D78F E=2e-06 s/c=1.20 id=16% cov=50% ---YDNWGNKKSDGSEPVIDWFWETFQEATSQDQRKLLSFITGSDR------------------------------------------ >UniRef50_Q54KP2(1788-1888:1898) Ubiquitin-protein ligase domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q54KP2_DICDI E=1e-15 s/c=0.83 id=27% cov=80% ------------------VQNIFQIMSEFTPQERKQFLLFISGSPHLPlqgfkgliprlTIVKkhhspplTPDDYLLSVMSCTNYIKLPDYSTREVMKEK LLYAM- >UniRef50_A0E799(4087-4167:4178) Chromosome undetermined scaffold_80, whole genome shotgun sequence n=2 Tax=Eukaryota RepID=A0E799_PARTE E=5e-06 s/c=0.64 id=28% cov=81% ----------------NHKSYFETYINQADPQTLKNMLKFITGSSTIPFDQGSyiisvefksnlDIRKLPLAHTCFKSIEVPLYANYGQMKQKLDIA-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * F 1 * * * * 1973 * 1068 * * * * * * * * * * * * 1899 1 0 * * * * * * 2277 0 0 T 2 * * * * * * * * * * * * * 2176 * * 361 * * * 2 0 * * * * * * 2543 0 0 S 3 * * * * * * * * * * * 2176 * * 2289 1405 2348 * * * 3 0 * * * * * * 2543 0 0 F 4 * * * * 716 * * * * * * * * * * * * * * 1354 4 0 * * * * * * 3283 0 0 N 5 * * 2698 * * 3161 * * * * * 1312 * * * 2335 2908 * * * 5 104 3850 * 0 * * * 4083 1000 0 D 6 * * 1888 * * 3023 * * * * * 1939 * * * 3797 1868 * * * 6 0 * * * * * * 4250 0 0 E 7 * * 2973 661 4267 * * * 4015 * * * * * * 3997 3975 * * * 7 0 * * * * * * 4440 0 0 S 8 * * 2627 * * * * * 4042 2115 * 4267 * * * 2530 * * * 1637 8 0 * * * * * * 4440 0 0 G 9 * * 3831 4563 * 2471 * * 3446 4398 * 3323 4403 * 3991 2107 2993 * * * 9 0 * * * * * * 4769 0 0 E 10 3632 4682 2865 1546 * 2631 * * 3588 * * * * * * 3843 * * * 3534 10 0 * * * * * * 4850 0 0 N 11 * * * 4498 * 1653 * * * 4768 * 1944 4876 * * 1924 4520 * * * 11 34 * 5444 * * * * 4915 0 0 A 12 2458 * 4796 2990 * 4848 * 3674 4814 * * 4853 * 4791 * 2545 * 5006 * 2094 12 67 * 4468 * * * 0 4915 0 1000 E 13 * * 1788 1850 * 4757 * * 5025 4134 * 2978 * 4717 5251 3603 * * * 4843 13 136 * 3477 * * * 0 4807 0 1551 K 14 5092 4203 * 3622 * * * 4574 2446 * * * 5044 2910 2611 3411 4897 3102 * 4698 14 150 * 3341 * * * 0 4684 0 2460 L 15 4761 * 4778 3701 3444 * * 2361 4580 3586 * 3876 * 4885 * 2720 3043 3987 * * 15 126 4488 4669 1000 1000 1176 843 4596 1000 3234 L 16 4162 * 4396 * * 3979 3310 3068 * 3403 3711 3657 4604 6012 * 2163 4586 4595 * * 16 0 * * * * * 0 4717 0 2531 Q 17 4810 * * 3296 5730 * * * 2231 * * 2958 3402 2251 2341 * * * * * 17 0 * * * * 1966 427 5248 0 2531 F 18 * * * * 3247 * 2744 3118 * 3074 5629 * * 4781 * 4054 3164 2234 * 3824 18 49 * 4910 * * 1015 985 5463 0 2084 K 19 * * * 6463 * * * 1425 3102 4592 5297 * * 6378 * 6479 * 1373 5395 * 19 38 6479 6062 2585 263 1000 1000 5663 1000 2453 R 20 6834 * 3967 2564 * * * 6199 2113 5289 * * * 1870 2349 5791 * * * * 20 19 * 6258 * * 1474 644 5745 0 2067 W 21 * * 4944 6845 3342 * 6623 5338 * 4727 2253 5326 * 5334 5245 * 6842 6052 1353 3532 21 11 * 7049 * * * 0 5922 0 2027 F 22 * * * * 482 * * 6467 * 2036 6654 * * * * * * * * 5728 22 14 6715 * 0 * 1038 963 6030 1000 2313 W 23 * 5810 * 6148 3366 * * 4433 5463 4437 * * * 4732 6160 5499 5518 4253 743 6603 23 0 * * * * 981 1019 5930 0 1578 S 24 4480 * 3100 1827 * 5592 * * 2928 7146 * 3843 * 3643 3681 3388 4076 6058 * * 24 0 * * * * * 0 5943 0 1000 I 25 2511 5499 5797 * 4421 * * 1964 * 4616 5316 * * * * 5598 6086 1521 6587 5547 25 0 * * * * 0 * 5936 0 1000 V 26 5297 6189 * * 3012 * * 2776 * 1525 4050 * * * * * * 1820 * * 26 39 5823 6812 0 * * * 5934 1623 0 E 27 3764 5907 3761 2154 * 5901 3728 * 3416 4377 6787 3400 6113 4966 3196 3401 6182 * * 6721 27 32 5489 * 0 * 0 * 5931 1687 1000 K 28 3901 6454 3185 2099 * 3742 * * 4014 * 4476 3715 * 3962 4011 3072 3727 * * * 28 44 5071 * 3494 134 * * 5934 1603 0 M 29 5279 * * 5837 1405 * * 6754 6098 1990 2547 * * * * * 6514 5677 4209 4384 29 25 * 5869 * * * * 5964 0 0 S 30 * 6339 2511 4985 * 5357 * * * * * 3502 4420 * * 1783 1596 * * * 30 0 * * * * 0 * 5948 0 1098 M 31 3753 * 4183 3320 6735 7352 6369 6700 5272 5474 7185 2686 2822 2573 4226 3135 * 4762 * 6754 31 0 * * * * * * 5964 0 0 T 32 4093 6520 2760 1537 * 6397 5887 6098 3860 * * 4507 * 3082 6499 4356 4227 4301 * * 32 0 * * * * * * 5964 0 0 E 33 6514 * 3987 1153 6098 * * * 4004 5708 5564 5405 * 2300 4698 5651 4832 * * 4677 33 0 * * * * * * 5964 0 0 R 34 * 5651 * * 4470 5677 7010 4880 2445 2631 6370 * * 2897 1501 * 5869 6397 * * 34 0 * * * * * * 5964 0 0 Q 35 3042 5627 * 5651 4893 5837 6685 5333 2549 5784 5168 6669 * 5022 1807 2498 5336 7010 * * 35 0 * * * * * * 5964 0 0 D 36 3114 * 3605 6468 * 5507 * * 2040 2508 4593 4764 * 3647 3121 3700 * * * * 36 0 * * * * * * 5964 0 0 L 37 * * * * 980 * * 4705 * 1347 6180 5677 * * * * * 5133 * * 37 0 * * * * * * 5964 0 0 V 38 * 6840 * 5527 5622 * * 3463 * 409 6711 * * * * * * 3558 * 6504 38 28 5677 * 1585 585 * * 5964 1000 0 Y 39 * 5624 * 4600 5910 * 6142 6391 1858 3194 6210 * * 2473 2585 3778 5019 5747 6450 5922 39 0 * * * * * * 5964 0 0 F 40 6108 * * * 109 * * 6150 * 6175 * * * * * * * * * 5041 40 0 * * * * * * 5964 0 0 W 41 2628 3820 * * * 5645 * 2325 * 3182 5714 * * * * 6720 3295 1924 4511 * 41 0 * * * * * * 5964 0 0 T 42 6410 4665 * * * 5677 * * * * * 5527 * * * 3888 306 * 5014 * 42 51 4835 * 3334 151 * * 5964 2403 0 S 43 5085 5412 * 6108 * 378 * * * * * 5132 * 5677 * 3234 6838 * * * 43 97 3937 * 3191 167 * * 5964 2956 0 S 44 4191 3156 * 5527 6932 * * 5151 6693 4479 5415 5210 * 3656 3256 1354 3933 6079 * 6104 44 278 2511 * 3336 150 * * 5964 4490 0 P 45 4242 * 2870 4220 6391 * * * 6658 * * 6846 1501 5800 4804 2266 3358 6199 * * 45 363 2167 * 3149 173 * * 5965 4688 0 P 46 4410 6717 4976 6498 4512 * 4964 5420 4893 3393 6136 4687 2147 5320 1899 4885 5315 6936 * 4903 46 105 3831 * 3151 172 * * 5965 3172 0 S 47 4627 * 6710 6374 3918 5390 * 3625 3443 2312 5914 * 2827 4933 4337 4620 4467 2756 * * 47 128 3561 * 3298 155 * * 5965 3389 0 I 48 4900 6449 * 6658 3396 6355 * 2238 5161 4237 4305 5526 1713 6012 6916 5575 5546 3300 * * 48 238 2719 * 3520 132 * * 5965 4035 0 T 49 4554 5483 * * 4885 3738 5471 2894 4355 5179 6742 3593 5490 3929 6015 3452 2349 3484 * 5628 49 142 3415 * 3819 106 * * 5965 3681 0 I 50 5748 * 5047 4177 2954 6977 5476 1961 3984 2996 5692 6406 * 6368 4688 4521 4482 3236 7234 7002 50 73 4350 * 2889 209 * * 5965 3001 0 R 51 4321 3965 4664 4493 * 4079 3545 6096 3635 5039 * 4290 7018 4440 1999 3760 5236 4887 * 4556 51 126 3577 * 2276 334 * * 5965 3675 0 P 52 * 5302 3947 5560 4550 2627 5676 6988 2855 5866 6781 3354 2259 5130 6147 4589 4640 4776 * 5342 52 105 3828 * 3364 147 * * 5965 3104 0 P 53 3232 3962 3211 3530 7189 3500 * 6848 4784 5688 4049 7160 2625 5837 * 2836 4382 5036 * 6695 53 178 3106 * 3598 124 * * 5965 3805 0 D 54 4637 * 2157 4824 7038 4179 5667 6934 3970 5656 * 3295 2380 6370 * 2663 4486 7011 * 6711 54 127 3572 * 3052 185 * * 5965 3596 0 D 55 4656 5118 2061 3758 * 4367 * 5344 3099 5626 * 3806 3685 5707 5168 3955 3643 4059 * 7095 55 115 3703 * 2194 356 * * 5965 3326 0 Q 56 3911 * 2184 3125 * 3337 6089 * 5243 5953 7237 3076 5485 3500 4492 3714 5517 6103 6470 4706 56 11 7004 * 3907 100 * * 5965 1000 0 H 57 3257 5106 4176 4827 4318 4596 3832 * 3848 4691 4270 4938 6004 5818 2098 3583 5020 * * 4630 57 157 3278 * 2657 249 * * 5966 3889 0 L 58 * 4641 * * 3176 * * 6707 * 587 5449 6446 5755 * * * * 6500 * 3183 58 14 6713 * 3907 100 * * 5966 1000 0 P 59 * * 5755 * 6111 * * 5256 * 5340 * * 126 * * * * * * * 59 0 * * * * * * 5966 0 0 T 60 * 5381 * 3790 6031 7185 4638 4357 4349 5409 4869 * * 5474 3435 2375 2192 2860 * 5543 60 0 * * * * * * 5966 0 0 A 61 780 6685 * * * 3902 * * * * * * * * * 2497 6513 2848 6139 * 61 0 * * * * * * 5966 0 0 N 62 5531 * 6749 6659 * 6050 1445 * 7151 5104 3648 3576 * 3782 3714 2492 6149 5529 * 6091 62 27 6608 6917 4700 57 * * 5966 1000 0 T 63 4464 * * * * 5290 * 6096 * 6370 * * * * * 4549 218 * * * 63 0 * * * * * 0 5962 0 1000 C 64 * 32 * * * * * * * * * * * * * * 5528 * * * 64 53 4790 * 1335 728 * 0 5962 1689 1000 I 65 5108 * 4821 * 1163 * 6444 4692 5591 4819 4414 5326 * 6214 * 2923 3464 4985 * 4533 65 16 6491 * 0 * * 0 5962 1000 1000 S 66 * 5948 5449 * 3772 6813 4642 6491 4845 3946 * 1116 * 6510 4126 2986 * 6111 * 4121 66 17 6409 * 2322 322 * 0 5962 1000 1000 R 67 5568 5847 * 4639 6386 * 6529 3862 5455 3050 3775 6737 * 3784 2626 3828 2664 4930 6704 3342 67 0 * * * * * 0 5962 0 1000 L 68 * * * * 4678 * * 2616 * 462 5423 * * * * * * 4361 * * 68 17 6386 * 1000 1000 * 0 5962 1000 1000 Y 69 6529 4525 2604 3580 5697 5593 3539 5177 2035 5849 6510 6578 * 5674 3866 4937 4208 3967 * 5487 69 0 * * * * 0 * 5962 0 1000 V 70 * * * * * * * 2283 * 616 3942 * * * * * * 4020 6034 * 70 0 * * * * * * 5966 0 0 P 71 6367 * * * * * * * * * 5471 * 201 5824 6471 6108 * * 6390 4650 71 0 * * * * * * 5966 0 0 L 72 3176 * 2759 2920 5676 5315 6111 6002 3892 3522 4348 4284 3081 4477 3631 5927 * 6458 * 6918 72 0 * * * * * * 5966 0 0 Y 73 * * * * 5485 * * 5548 6193 * * * * * * 6452 * 5679 * 133 73 13 6824 * 3907 100 * * 5966 1000 0 S 74 4155 6744 4480 3583 * * * * 3524 * * 4015 3185 5170 4161 1541 3057 * * * 74 0 * * * * * * 5966 0 0 S 75 * 4729 3201 * * 6710 * 6409 5246 * * 3302 * 6917 6205 1292 1866 * * * 75 0 * * * * * * 5962 0 0 K 76 3352 6992 6189 3018 4580 * * 4855 1960 4551 6444 6830 4378 6051 2988 4739 * 4528 * 3462 76 0 * * * * * * 5962 0 0 Q 77 3283 * 3113 1172 * 5002 7023 * 4627 * * 5177 * 2821 5619 4430 5465 * * * 77 0 * * * * * * 5962 0 0 I 78 4512 * 4074 3764 * * 5485 2301 3634 3873 4679 5424 * 4410 5478 5250 3061 2545 * * 78 0 * * * * * * 5962 0 0 L 79 4602 6127 * * 3790 * * 6180 * 1012 1519 * * * * * 6207 * * * 79 0 * * * * * * 5962 0 0 K 80 4317 6395 * 3032 5889 6807 5305 6610 1851 3933 * 6466 * 5470 2003 5069 5082 6017 6771 4490 80 0 * * * * * * 5922 0 0 Q 81 3733 * 4056 1578 6389 6310 * * 2634 7166 6387 5587 * 3057 3791 3831 4582 * * * 81 0 * * * * * * 5919 0 0 K 82 3595 6033 * * * 6523 6348 6104 1112 5312 4640 4629 * 4906 2271 4857 * 6715 * 6449 82 0 * * * * * * 5919 0 0 L 83 * * * * 4790 * * 2861 * 457 4003 * * * * * * 4818 * * 83 0 * * * * * * 5919 0 0 L 84 6765 * 4292 3318 6666 6700 * 3791 3406 2005 3900 6817 * 6436 2711 4992 3933 5509 5393 5530 84 0 * * * * * * 5920 0 0 L 85 4631 5343 4546 6486 3665 * * 2502 3719 2835 4339 * * 4029 6305 * 3301 3698 * 3215 85 0 * * * * * * 5920 0 0 A 86 278 4741 * * * * * 6627 * 6075 6149 * * * * 3518 * 6404 * * 86 0 * * * * * * 5862 0 0 I 87 5439 * * * 7250 * * 977 * 2393 3282 * * * * 6408 6819 2751 * * 87 0 * * * * * * 5833 0 0 K 88 * * * 1121 * * * * 2816 * * * * 1926 2887 * * * * * 88 0 * * 0 * * * 5155 0 0 //