HHsearch 1.5 NAME c3oqtP_ FAM FILE c3oqtP_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3oqtP_.a3m DATE Sat Jul 23 09:37:06 2011 LENG 70 match states, 70 columns in multiple alignment FILT 38 out of 42 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.0 EVD 0.3839 -1.3143 SEQ >ss_dssp CCSCCEEEEEEEEEESSCHHHHHHHHHHHHHHHSSCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCCC >sa_dssp EEEDDCEECECDBECEECCECABEDBCEDBDEECDECDDDEDDCEEDEEEEEEDCDCCABACAAADDCEE >ss_pred CCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCEEEEEEEEEEEEEEECCC >ss_conf 9873699999997187347889999999998665073389999999998679088999999999997179 >Consensus mxxxvxKviEivgxSxxSxedAvxxAvxxAxkTlxxixxxeVxexxxxvxxgxvxxyrVxlkvxFxlexs >c3oqtP_ MSNHTYRVIEIVGTSPDGVDAAIQGGLARAAQTMRALDWFEVQSIRGHLVDGAVAHFQVTMKVGFRLEDS >UniRef50_D2RSH5(2-66:66) Putative uncharacterized protein n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RSH5_9EURY E=1e-06 s/c=0.83 id=29% cov=94% ----VFKKITLIGTSTESFDDAADNAIDRAEDTLQNLYWIEVDELGVELASVEDRQYQAEVTVAFELEE- >UniRef50_Q1AVE8(4-68:70) Putative uncharacterized protein n=10 Tax=Bacteria RepID=Q1AVE8_RUBXD E=6e-05 s/c=0.74 id=32% cov=94% ----VARVTEISAISPESFEDAVKVGIQRATKTLRGVTSAWVKDFNVEIENGNITGYRVNMEVTFVLED- >UniRef50_B8CVZ2(4-69:70) Uncharacterized conserved protein n=2 Tax=cellular organisms RepID=B8CVZ2_HALOH E=2e-14 s/c=1.22 id=27% cov=96% ----TVKIIELVGESDKGWEDAVKNAVWEASKTIDNITGVEVLNMTADVKDGKVFDYKVNIQVAFPVHEN >UniRef50_B4DC56(2-68:85) Putative uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC56_9BACT E=7e-10 s/c=0.97 id=21% cov=97% --ANVEKVIEVVAQSEKSWEDAAREAVRVASTSLRNLSSISVKNFEATIQGGEITAYRVRAEISFALDS- >UniRef50_C8XID8(3-63:69) Putative uncharacterized protein n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XID8_NAKMY E=0.0001 s/c=0.78 id=32% cov=89% ----VQKAIDLSG-SGETIQDAVSEALDRARETLEGITRFEVKDITG-IVDGPHTAYQVEIRVWFTV--- >UniRef50_A4G817(5-68:68) Putative uncharacterized protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G817_HERAR E=3e-12 s/c=1.14 id=18% cov=93% ------KVLEALAESDKSWEDAAQHTRHHGAKTMHNIKSIYIKEIEASANQNKIVKYRSHAKNSFLPDES >UniRef50_D2RT73(5-67:69) Putative uncharacterized protein n=2 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RT73_9EURY E=3e-07 s/c=0.90 id=23% cov=80% -------IVELVGNSTESWEDAVQNAMDAADETIDHVSGVEIESERIDREGRETERYVVTLE-------- >UniRef50_Q89JD1(177-245:247) Bll5352 protein n=14 Tax=Bacteria RepID=Q89JD1_BRAJA E=7e-12 s/c=1.04 id=32% cov=99% MPESVYKVIELIGTSNDSWEKAAANAVEQAAKSLRDLRVAEVVKLDIQLDaKGKVEAYRAKLNVSFKFE-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * 2739 234 * * * * * * * * * 1 0 * * * * * * 2400 0 0 S 2 * * * * * * * * * * * 1855 2785 * * 1040 3439 * * * 2 0 * * * * * * 2400 0 0 N 3 2245 * 2039 3457 * 3400 2947 * * * * 2119 * * * * * * * * 3 0 * * * * * * 2875 0 0 H 4 * * 3466 * * * 986 * * * * 2525 * * 2805 3512 * * * * 4 0 * * * * * * 2886 0 0 T 5 * * * * * * * 3896 * * * * * * * * 2228 475 * * 5 0 * * * * * * 3774 0 0 Y 6 2869 * * 4700 4408 * * * * 4611 * * * 4426 * * * 2554 * 944 6 0 * * * * * * 3774 0 0 R 7 * * * * * * * * 258 * * * * * 2822 5465 * * * * 7 0 * * * * * * 4002 0 0 V 8 4625 * * * 4265 * * 2611 2411 4946 * * * * * * * 934 * * 8 0 * * * * * * 4036 0 0 I 9 * * * * * * * 883 * 2848 * * * * * 3668 3263 2880 * * 9 0 * * * * * * 4093 0 0 E 10 * * 3046 308 * * * * * * * 4988 * * * * 4650 * * * 10 0 * * * * * * 4093 0 0 I 11 4206 * * * * * * 1313 * 1508 5550 * * * * * * 2554 * * 11 0 * * * * * * 4091 0 0 V 12 * * * * * * * 1864 * 3643 * 4981 * * * 3585 4080 1086 * * 12 0 * * * * * * 4091 0 0 G 13 1978 * * * * 581 * * * * * * * * 5993 4008 * * * * 13 54 * 4776 * * * * 4091 0 0 T 14 * * 4147 2636 * * * 3852 * 5123 * 3905 * 4271 * 2257 1601 5193 * * 14 0 * * * * 0 * 4034 0 1000 S 15 * * * * * 4863 * * * * * * * * * 50 * * * * 15 50 * 4863 * * * * 4091 0 0 P 16 5453 * 2971 3672 * 4712 * * 4227 * * 5269 1526 5031 4989 3909 2492 * * * 16 0 * * * * 0 * 4099 0 1000 D 17 * * 3174 2030 * * * 5492 1911 * * 4202 * 3771 5248 * 2775 4154 * * 17 0 * * * * * * 4091 0 0 G 18 * * * * * 2403 * * * * * * * * * 369 4776 * * * 18 0 * * * * * * 4091 0 0 V 19 * * * * 2379 * * 2214 * 4391 * * * * * 4223 * 3430 1419 5376 19 0 * * * * * * 4091 0 0 D 20 5414 * 1950 728 * * * * 5165 * * * * 4112 * 5137 * * * * 20 0 * * * * * * 4091 0 0 A 21 4386 * 685 2849 * 5165 * * 5324 * * * * 2851 * * * * * * 21 0 * * * * * * 4091 0 0 A 22 0 * * * * * * * * * * * * * * * * * * * 22 0 * * * * * * 4091 0 0 I 23 1896 * * * * * * 1704 * * * * * * * * 4301 1420 * * 23 0 * * * * * * 4091 0 0 Q 24 3238 * 4693 5273 * * 5007 * 2223 * * 5516 * 2101 1917 4776 5169 * * * 24 0 * * * * * * 4091 0 0 G 25 5248 * * 2547 * 5538 4206 * 4134 * 5414 1332 * 4562 5387 3413 4475 4503 * * 25 0 * * * * * * 4091 0 0 G 26 479 * * * * 2299 * * * * * * * * * * 4206 5317 * * 26 0 * * * * * * 4091 0 0 L 27 * * * * * * * 1656 * 2514 4673 * * * 4206 * * 1272 * * 27 0 * * * * * * 4091 0 0 A 28 2167 * 2919 2424 * * 3425 * 3527 * * * * 3422 3725 4290 4709 * 5594 * 28 0 * * * * * * 4091 0 0 R 29 3886 * * 2268 * * 4206 * 2917 * * * 5993 3751 1422 * 4346 5276 * * 29 0 * * * * * * 4091 0 0 A 30 171 5270 * * * 4206 * * * * * * * * * * * 4981 * * 30 0 * * * * * * 4091 0 0 A 31 1760 * 4673 4693 * 5550 5248 * * * * 4438 * * 2655 1508 5457 * * * 31 0 * * * * * * 4091 0 0 Q 32 5807 * 3423 3012 * 4981 * * 920 * * 5376 * 3173 4506 * 5276 * * * 32 0 * * * * * * 4091 0 0 T 33 * * * * * * * 4684 * * * * * * * 1884 535 * * * 33 0 * * * * * * 4091 0 0 M 34 * * * * * * * 2216 * 1292 3224 * * * * * * 1893 * * 34 0 * * * * * * 4091 0 0 R 35 * * 2370 3819 * * 4206 * 3526 5492 * 5270 * 4693 1233 5169 * * * 4195 35 0 * * * * * * 4091 0 0 A 36 5538 * 2740 5660 * 2685 2692 * 5248 * * 1227 * 5387 * 5550 * * * * 36 0 * * * * * * 4091 0 0 L 37 * * * * * * * 1026 * 1396 4532 * * * * * * 3542 * * 37 0 * * * * * * 4091 0 0 D 38 5414 * 2647 4219 * * 4996 * 2648 * * * * 4165 2013 3030 3645 5165 * 4693 38 0 * * * * * * 4091 0 0 W 39 5181 * * * * 2458 * * * * * * * 4851 4756 2135 * 3065 1428 * 39 0 * * * * * * 4117 0 0 F 40 2135 * * * 1526 * * 2337 * * * * * * * * * 2137 * * 40 0 * * * * * * 4117 0 0 E 41 * * * 771 * * * * * * * 4851 * 5468 3865 5153 * * 2721 3206 41 0 * * * * * * 4117 0 0 V 42 * * * * * * * 2474 * * * * * * * * * 286 * * 42 0 * * * * * * 4117 0 0 Q 43 * * 4678 4689 * * * 3055 1688 4474 * 3649 * 3295 * * 2869 2965 * * 43 0 * * * * * * 4117 0 0 S 44 * * 2864 870 * 5103 4851 * 5294 * * 3194 * 4139 * 4053 * * * * 44 0 * * * * * * 4117 0 0 I 45 * * * 4689 3271 * * 1973 * 3198 3617 * * 2302 * 5103 3025 4111 * * 45 0 * * * * * * 4117 0 0 R 46 * * 3065 2822 * 4678 * * 4069 * * 3623 * 4531 1429 5240 3081 * * * 46 0 * * * * * * 4117 0 0 G 47 1922 4356 * * * 1389 * 3960 * * 3865 * * * * * * 2535 * * 47 54 * 4756 * * * * 4117 0 0 H 48 3369 * 3420 3936 * * 2021 4153 * * * 4043 * 3413 5248 3036 4159 3589 * * 48 0 * * * * 0 * 4059 0 1000 L 49 4205 * * * * * * 1736 * 2347 * * * * 4689 * 4971 1402 * * 49 83 4165 * 0 * * * 4117 1663 0 V 50 4678 * 2490 1660 * * * * 2274 * * 4205 * 4258 5649 5173 5549 3569 * * 50 85 4123 * 0 * * * 4117 1662 0 D 51 * * 1444 3636 * 2992 * * 4298 * * 2228 * 4205 * 3215 * * * * 51 0 * * * * * * 4117 0 0 G 52 4612 * 3585 * * 647 * * * * * 3197 * 5481 4689 5173 * 4678 * * 52 0 * * * * * * 4117 0 0 A 53 3850 * 5798 2413 * 4612 * * 1467 5468 5230 3803 4756 5005 5181 * 5786 4437 * 4598 53 0 * * * * * * 4117 0 0 V 54 * * 4678 * 5649 * 4756 1535 5173 4141 * 4612 5547 * * * 4689 1421 * * 54 0 * * * * * * 4117 0 0 A 55 2496 * * 3230 5466 5277 * 3325 * * * 4598 * * 4078 4240 2313 2229 * * 55 31 * 5547 * * * * 4117 0 0 H 56 3147 * 4483 2563 * 4233 2472 * 3642 5086 * 4830 * 3941 4666 3697 3463 * * 5458 56 0 * * * * 0 * 4119 0 1000 F 57 * * * * 2068 * * * * * * * * * * * * * 2996 652 57 0 * * * * * * 4117 0 0 Q 58 5173 * * * * * * * 3180 * * * * 1291 1270 * * 4689 * * 58 0 * * * * * * 4117 0 0 V 59 2577 * * * * * * 3865 * * * * * * * 4205 * 495 * * 59 0 * * * * * * 4117 0 0 T 60 * 5277 * 3359 * 4196 3585 5173 3065 * * 1890 * * 5153 * 2165 3821 * * 60 0 * * * * * * 4117 0 0 M 61 3095 3825 * * * * * 2712 * 1330 3355 * * * * * 4207 3181 * * 61 0 * * * * * * 4117 0 0 K 62 * * * 2858 * * * * 947 5549 * 4207 * 3403 2897 * 4678 * * * 62 0 * * * * * * 4117 0 0 V 63 * * * * * * * 1828 * 3183 * 4118 * * * 4580 * 974 * * 63 0 * * * * * * 4064 0 0 G 64 2436 * * * * 1667 * * * * * * * * * 1835 2831 4580 4732 * 64 0 * * * * * * 4064 0 0 F 65 * * * * 102 * * * * 4938 * * * * * * * * * 4801 65 0 * * * * * * 4045 0 0 R 66 5012 * * 2928 * * * * 2631 2465 * * 5081 * 1884 * 3164 3589 * * 66 0 * * * * * * 4006 0 0 L 67 4740 * * * 5015 * * 3217 * 1150 4196 * 4083 * * * * 2110 * 5134 67 0 * * * * * * 3953 0 0 E 68 * * 1979 825 * * 4880 * 3309 * * * * * 4409 * * * * * 68 0 * * * * * * 3831 0 0 D 69 * * 1634 1262 * * * * * * * 4477 3687 * * 2856 * * * * 69 0 * * * * * * 3609 0 0 S 70 * * * * * * * * * * * 1912 * * * 446 * * * * 70 0 * * 0 * * * 3009 0 0 //