HHsearch 1.5 NAME c3onrI_ FAM FILE c3onrI_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3onrI_.a3m DATE Sat Mar 19 08:40:43 2011 LENG 71 match states, 71 columns in multiple alignment FILT 40 out of 44 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.0 EVD 0.3700 -1.8436 SEQ >ss_dssp CCCEEEEEEEEEESSCHHHHHHHHHHHHHTTCSCCCCEEEEEEEEEECTTCCEEEEEEEEEEEECCSSSCC >sa_dssp EEEDCDDDCEBDBEECDECACCDBDDEBEEECECBEEDEDDEDDDCEDEEDEDDCDBCACADBDCEEEDEE >ss_pred CCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCEEEEEEEEEEEEEECCCCCC >ss_conf 92499999986086347889999999997665085279999999998479389999999999996077639 >Consensus msVxKviEivgxSxxSxedAvxxAvxxAxkTlxnixxxeVxexxxxvxxgxvxxyrVxlkvxFxlxxsxxx >c3onrI_ VSVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEVSFKMRPSQPL >UniRef50_D2S5H8(11-73:77) Putative uncharacterized protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5H8_9ACTO E=2e-05 s/c=0.80 id=33% cov=89% -AVVRISEIVGSSPNSFSDAVRNAVQAAAQTVRGIRGVEVIGSNADVDENGNLSlYKVHCKIAF-------- >UniRef50_A5D2Y6(4-61:64) Uncharacterized conserved protein n=6 Tax=Clostridia RepID=A5D2Y6_PELTS E=0.0001 s/c=0.82 id=25% cov=83% ----KISELVGESPDSWKGAVQSAIAEASKTIKNIVAVEVVNFTANVENGRLVEYKANLKVA--------- >UniRef50_C1XF33(4-70:70) Uncharacterized conserved protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XF33_MEIRU E=2e-16 s/c=1.30 id=26% cov=96% --VYKKVELVGSSSESLEDAIKVALARARQTLRSLDWFEVKEIRGSLTDGYVNSYQVTLLVGFRLEEGE-- >UniRef50_A4CG68(1-66:66) Putative uncharacterized protein n=7 Tax=Flavobacteria RepID=A4CG68_9FLAO E=3e-14 s/c=1.20 id=34% cov=94% MAVLKVIEVLANSDKSWEDAAEKALAQASKSVDHIRSIYINEQSCTVKDGKIASYRVNTKITFEVK----- >UniRef50_A0B8Q0(15-81:82) Putative uncharacterized protein n=1 Tax=Methanosaeta thermophila PT RepID=A0B8Q0_METTP E=4e-14 s/c=1.18 id=41% cov=89% --VYKFIELVGTSTVGWEDAVKTVVETASKTLRDLRVAEVTELDVRLDKGKIVEYRAKVKLSFK------- >UniRef50_D1R9J1(1-65:66) Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R9J1_9CHLA E=2e-06 s/c=0.83 id=27% cov=93% MSIVKVIEVISEG-KSIDDAVKSAVAEAAKTVEDIKQVNVQHIEGIVKDNKVVNFRVNAKISFVVQ----- >UniRef50_B0R5M0(2-68:68) Dodecin n=9 Tax=Halobacteriaceae RepID=B0R5M0_HALS3 E=0.0005 s/c=0.68 id=32% cov=96% --VFKKVLLTGTSEESFTAAADDAIDRAEDTLDNVVWAEVVDQGVEIGAVEERTYQTEVQVAFELDGSQ-- >UniRef50_C7R5Z8(1-67:67) Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=C7R5Z8_KANKD E=6e-12 s/c=1.07 id=28% cov=94% MTVAKVTEIIADSSESFEDAVKRGIRRANKTLDQVKSAWVKEQQVVIQDGEVEKFRVVMKVTFLLK----- >UniRef50_D2RT73(5-63:69) Putative uncharacterized protein n=2 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RT73_9EURY E=1e-06 s/c=0.92 id=22% cov=83% ----EIVELVGNSTESWEDAVQNAMDAADETIDHVSGVEIESERIDREGRETERYVVTLEAS--------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * V 1 * * * * * * * * * 4294 204 * * * * * * 3625 * * 1 0 * * * * * * 3273 0 0 S 2 2150 * * * * 3943 * * * * * * * * * 1074 2091 * * * 2 0 * * * * * * 3509 0 0 V 3 * * * * 3895 * * 2791 * * * * * * * * * 343 * * 3 0 * * * * * * 3978 0 0 Y 4 2922 * * 5066 3714 * * * * 3498 * * * 4515 * * * 2436 * 1168 4 0 * * * * * * 4065 0 0 K 5 * * * 4432 * * * * 276 * * * * * 3214 5633 * * * * 5 0 * * * * * * 4170 0 0 V 6 4641 * * * 4397 * * 2629 2245 5017 * * * * * * * 974 * * 6 0 * * * * * * 4170 0 0 I 7 * * * * * * * 953 * 2914 * * * * * 3750 3313 2509 * * 7 0 * * * * * * 4189 0 0 D 8 * * 3174 334 * * * * * 4845 * 5091 * * * * 4967 * * * 8 0 * * * * * * 4189 0 0 I 9 4269 * * * * * * 1408 * 1365 5639 * * * * * * 2616 * * 9 0 * * * * * * 4187 0 0 I 10 * * * * * * * 1900 * 3715 * 4426 * * * 3654 3469 1186 * * 10 0 * * * * * * 4187 0 0 G 11 1961 * * * * 590 * * * * * * * * 5647 4083 * * * * 11 52 * 4828 * * * * 4187 0 0 T 12 * * 4237 2698 * * * 3942 * 5239 * 3801 * 4346 * 2184 1584 5215 * * 12 0 * * * * 0 * 4134 0 1000 S 13 * * * * * 4906 * * * * * * * * * 49 * * * * 13 49 * 4906 * * * * 4187 0 0 P 14 5481 * 3061 3225 * 4747 * * 4218 * * 4610 1622 5133 5010 3961 2555 * * * 14 0 * * * * 0 * 4166 0 1000 T 15 * * 3297 1889 * * * 5550 1897 * * 4221 * 3820 5270 * 2877 4265 * * 15 0 * * * * * * 4187 0 0 S 16 * * * * * 2637 * * * * * * * * * 315 4828 * * * 16 0 * * * * * * 4187 0 0 W 17 * * * * 2245 * * 2254 * 4418 * * * * * 4268 * 3566 1420 5456 17 0 * * * * * * 4187 0 0 E 18 5446 * 2160 712 * * * * 5254 * * * * 4177 * 5196 4874 * * * 18 0 * * * * * * 4187 0 0 Q 19 4058 * 713 2883 * 5254 * * 4663 * * * * 2959 * * * * * * 19 0 * * * * * * 4187 0 0 A 20 0 * * * * * * * * * * * * * * * * * * * 20 0 * * * * * * 4187 0 0 A 21 1760 * * * * * * 1859 * * * * * * * * 4365 1394 * * 21 0 * * * * * * 4187 0 0 A 22 3156 * 3936 5364 * * 5110 * 2292 * * 5535 * 2238 1885 4828 5286 * * * 22 0 * * * * * * 4187 0 0 E 23 5270 * 4874 2660 * * 4269 * 4231 * 5446 1319 * 4653 5460 3237 4574 4564 * * 23 0 * * * * * * 4187 0 0 A 24 443 * * * * 2400 * * * * * * * * * * 4269 5439 * * 24 0 * * * * * * 4187 0 0 V 25 * * * * * * * 1587 * 2619 4450 * * * 4269 * * 1297 * * 25 0 * * * * * * 4187 0 0 Q 26 2372 * 2610 2381 * * 3574 * 3355 * * * * 3484 3763 4338 4747 * 5664 * 26 0 * * * * * * 4187 0 0 R 27 3776 * * 2333 * * 4269 * 2794 * * * 5647 3528 1493 * 4447 5346 * * 27 0 * * * * * * 4187 0 0 A 28 192 5247 * * * 4269 * * * * * * * * * * * 4426 * * 28 0 * * * * * * 4187 0 0 R 29 1849 * 4450 3936 * 5639 5270 * * * * 4504 * * 2759 1506 5545 * * * 29 0 * * * * * * 4187 0 0 D 30 5839 * 2857 3286 * 4426 * * 949 * * 5456 * 3539 4504 * 5346 * * * 30 0 * * * * * * 4187 0 0 S 31 * * * * * * * 4963 * * * * * * * 1861 530 * * * 31 0 * * * * * * 4187 0 0 V 32 * * * * * * * 2222 * 1201 3600 * * * * * * 1898 * * 32 0 * * * * * * 4187 0 0 D 33 * * 2170 3866 * * 4269 * 3346 5550 * 5247 * 5002 1313 5286 * * * 4265 33 0 * * * * * * 4187 0 0 D 34 * * 2750 5727 * 2601 2659 * 5270 * * 1185 * 5460 * 5584 * * * * 34 0 * * * * * * 4187 0 0 I 35 * * * * * * * 1063 * 1492 4580 * * * * * * 3012 * * 35 0 * * * * * * 4187 0 0 R 36 5446 * 2910 4266 * * 5032 * 2714 * * * * 3851 2019 2998 3711 4051 * 5002 36 0 * * * * * * 4187 0 0 V 37 5254 * * * * 2367 * * * * * * * 4906 4828 2250 * 2886 1451 * 37 0 * * * * * * 4187 0 0 A 38 1912 * * * 1670 * * 2491 * * * * 5647 * * * * 2170 * * 38 0 * * * * * * 4187 0 0 R 39 * * * 761 * * * * * * * 4906 * 5550 3781 5346 * * 2680 3297 39 0 * * * * * * 4187 0 0 V 40 * * * * * * * 2365 * * * * * * * * * 311 * * 40 0 * * * * * * 4187 0 0 I 41 * * 5002 4450 * * * 3042 1789 4599 * 3460 * 3714 * * 2906 2552 * * 41 0 * * * * * * 4187 0 0 E 42 * * 2586 922 * 5162 4864 * 4622 * * 3306 * 4167 * 4440 * * * * 42 0 * * * * * * 4173 0 0 Q 43 * * * 4440 3367 * * 2138 * 3143 3702 * * 2192 * 5162 2872 4149 * * 43 0 * * * * * * 4173 0 0 D 44 * * 3043 2884 * 3919 * * 3770 * * 3710 * 4624 1513 5331 3164 * * * 44 0 * * * * * * 4173 0 0 M 45 2009 4416 * * * 1504 * 3528 * * 4127 * * * * * * 2263 * * 45 0 * * * * * * 4173 0 0 A 46 3634 * 3411 3507 * * 2252 3512 * * * 4163 * 3269 5413 3144 4317 3418 * * 46 0 * * * * * * 4173 0 0 V 47 4251 * * * * * * 1797 * 2494 * * * * 4440 * 4403 1363 * * 47 92 5254 4804 0 * * * 4173 1000 0 D 48 4939 * 2115 1752 * 4820 * * 2281 * * 4239 * 4335 5613 5236 5513 5209 * * 48 64 4530 * 0 * 0 * 4119 1664 1000 S 49 4158 * 1592 3234 * 2713 * * 4555 * * 2561 * 4251 * 3492 * * * * 49 0 * * * * * * 4173 0 0 A 50 4127 * 3642 * * 866 * * 5535 * * 2660 * 5505 4440 * * 3919 * * 50 0 * * * * * * 4173 0 0 G 51 4468 * 5815 2252 * 2932 * * 1561 5526 5254 4667 4804 5022 5239 * 5800 5750 * 4634 51 0 * * * * * * 4173 0 0 K 52 * * 4982 4088 5703 * 4804 1651 4501 5239 * 3999 5620 * * * 4440 1571 * * 52 0 * * * * * * 4173 0 0 I 53 2728 * * 3236 5644 5237 * 3154 * 5162 * 4634 * * 3553 5423 2459 2149 * * 53 30 * 5620 * * * * 4173 0 0 T 54 3316 * 4621 2505 * 4334 2679 * 3694 * * 4843 * 4158 4423 3297 2855 * * 5480 54 113 3736 * 0 * 0 * 4176 2037 1000 Y 55 * * * * 2239 * * * * * * * * * * * * * 2855 622 55 0 * * * * * * 4173 0 0 R 56 5263 * * * * * * * 3269 * * * * 1299 1259 * * 4440 * * 56 0 * * * * * * 4173 0 0 I 57 2565 * * * * * * 4127 * * * * * * * 4251 4859 542 * * 57 0 * * * * * * 4173 0 0 K 58 * 5237 * 3032 * 4203 3636 5263 3043 * * 1881 * * 5303 * 2294 3869 * * 58 0 * * * * * * 4173 0 0 L 59 3156 3890 * * * * * 2790 * 1251 3806 * * * * * 4296 2909 * * 59 0 * * * * * * 4173 0 0 E 60 * * * 2888 * * * * 1057 5567 * 3895 * 3078 2777 * 4982 * * * 60 0 * * * * * * 4173 0 0 V 61 4440 * * * * * * 2120 * 3311 * 4251 * * * 4853 * 899 * * 61 0 * * * * * * 4173 0 0 S 62 2351 * * * * 1846 * * * * * * * * * 1682 2800 4853 4804 * 62 0 * * * * * * 4173 0 0 F 63 * * * * 95 * * * * 4986 * * * * * * * * * 4943 63 0 * * * * * * 4080 0 0 K 64 4633 * * 2291 * * * * 2373 4597 * * 4914 * 1710 * 2924 4312 * * 64 0 * * * * * * 3811 0 0 M 65 * * * * * * * 2802 * 928 3731 * * * * * * 1967 * * 65 0 * * * * * * 3678 0 0 R 66 * * 3061 1761 * * * * 1771 * 3479 * * 3100 3541 * * * * * 66 0 * * * * * * 3318 0 0 P 67 * * * 1607 * 2375 * * * * * 2489 1733 * * * * * * * 67 0 * * * * * * 2704 0 0 S 68 2695 * * * * 2629 * * * * * * * * * 548 * * * * 68 0 * * * * * * 2704 0 0 Q 69 * * * 1710 * * * * * * * * * 526 * * * * * * 69 0 * * * * * * 2197 0 0 P 70 * * * * * * * * * * * * 0 * * * * * * * 70 0 * * * * * * 1113 0 0 L 71 * * * * * * * * * 0 * * * * * * * * * * 71 0 * * 0 * * * 1113 0 0 //