HHsearch 1.5 NAME c3o2pE_ FAM FILE c3o2pE_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3o2pE_.a3m DATE Sat Sep 18 09:18:07 2010 LENG 86 match states, 86 columns in multiple alignment FILT 104 out of 217 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.1 EVD 0.4296 -0.0817 SEQ >ss_dssp CCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSEEEHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHTTSEEECTTSSEEEECC >sa_dssp EDEDDEEDDEEEDDCDECBEBABDAACDBAEEEDEBDCEDABEDACEDAEEECEBEDDCADDABECACEEDDBEDCEEDEBBCCDE >ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHEECCCCCEEEECC >ss_conf 94146889999999999999999999999985785598999999999985048999899999999998501310317967577349 >Consensus xxxxxexxxxxxxixxxRxxxixAxIVRiMKxxkxlxxxxLxxxvxxxlxxxfxxxxxxikxxIexLIekeyixRxedxxxyxYiA >c3o2pE_ NKRLTEDERIEKELNTERQIFLEACIVRIMKAKRNLPHTTLVNECIAQSHQRFNAKVSMVKRAIDSLIQKGYLQRGDDGESYAYLA >UniRef50_A2ENF7(716-785:786) Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2ENF7_TRIVA E=0.0003 s/c=0.66 id=24% cov=83% ---------------QDIEKSVSACIIRILKTGKKLNASEIVVEVKKRTAQYFRVDDDTIREQIRDAEIKEFIRMGQESGKYSYL- >UniRef50_UPI0001A595D2(744-828:828) cullin 5 isoform 2 n=2 Tax=Euteleostomi RepID=UPI0001A595D2 E=3e-18 s/c=1.09 id=24% cov=99% TERMREEE--NEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQMEWLIEHRYIRRDEaDINTFIYMA >UniRef50_Q6BUS5(706-783:784) DEHA2C08426p n=2 Tax=Debaryomyces hansenii RepID=Q6BUS5_DEBHA E=1e-11 s/c=0.90 id=21% cov=87% -----------KALERNRSVEFRSALVRVMKSAKRISYLDLLTQTLPLVEKNGPCTIADLKSNLEYLIENEFVKRELDGQSLSYI- >UniRef50_UPI00016E04CD(1567-1649:1654) UPI00016E04CD related cluster n=3 Tax=Takifugu rubripes RepID=UPI00016E04CD E=2e-10 s/c=0.80 id=23% cov=86% ------NEDAAGTLERKRNY-IYCLIVHILKREKEMHIDNLVFKVMESCQKqdgvpsvgggRFSCATSDVLSCIMHVICRGCARRNEENP------ >UniRef50_A2FHP4(552-626:641) Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2FHP4_TRIVA E=4e-09 s/c=0.83 id=16% cov=81% ----DESTEIPKRTVESVHFnncndQIEAATYKFLKSRRSATVDEIVEAVYNVLRPKFDPPREDIEKCLNKLVEREYI------------- >UniRef50_Q5CUH7(765-850:851) Cullin domain containing protein n=2 Tax=Cryptosporidium RepID=Q5CUH7_CRYPV E=2e-09 s/c=0.73 id=15% cov=100% NYEIKQNFDSEGSSIRDKGYIIDSIIVRNLKKNKTLHIDDITRRVINHNDVLLHGSTELIVERLEMLCQKEFVSKDLfSQNLYSYV- >UniRef50_Q23F49(448-532:533) Putative uncharacterized protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q23F49_TETTH E=3e-07 s/c=0.66 id=17% cov=94% ----KENKKIAISFEENpgqKKYIIEAGIVKMAKQLMSFDKNVIFQKTLDYLRDKIQLDFTNFDTALEGLIKKQYIE-DKGQNQYKYI- >UniRef50_A2DA01(609-665:673) Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2DA01_TRIVA E=0.0001 s/c=0.83 id=21% cov=66% -----------------RESQIDAAITRALKGGGPMTEKDLISVVQKEVE--FPVSEDLFQRRLKILITRQFLER----------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * N 1 * * * * * * * * * * * 1078 * * * 2388 1577 * * * 1 0 * * * * * * 3849 0 0 K 2 * * * 1085 * * * * 2202 * * 4231 * * 2747 * 4545 * * 3914 2 0 * * * * * * 4908 0 0 R 3 * * * 1971 * 4971 * * 2759 * * 5057 * 2276 2386 3642 4123 * * * 3 32 * 5515 * * * * 5142 0 0 L 4 5022 * * 5198 * * * 1478 3354 3894 3374 5221 * 4018 5273 * 3929 2822 * * 4 0 * * * * 0 * 5329 0 1000 T 5 5796 * 2857 3034 * 4956 * * 2239 * * 5611 * 3589 5124 3100 2127 * * * 5 0 * * * * * * 5790 0 0 E 6 4290 * 3622 853 * * * 5405 3129 * * 5746 * 2860 * * 5676 * * * 6 0 * * * * * * 5895 0 0 D 7 6443 * 4020 2690 * 3904 * 4178 4286 * * 2249 6224 3450 3283 3047 4460 * * 6148 7 32 6780 6286 0 * * * 6151 1000 0 E 8 4444 * 3289 1724 5413 5884 * * 2436 6348 5659 5469 4972 4954 5973 3187 4090 * * 5601 8 27 * 5755 * * * 0 6121 0 1000 R 9 3319 * 2971 1933 * 5910 5717 3801 2617 * * 5118 * 3552 5418 4418 4559 6230 * * 9 32 5497 * 1694 533 * 0 6100 1592 1637 I 10 4678 6454 3839 3966 5926 5107 * 2168 4571 5785 6457 6280 * 6388 * 3787 2133 2728 * * 10 15 6618 * 1000 1000 0 * 6116 1000 1637 E 11 3431 * 6748 2132 * 6772 5674 5770 5040 4747 3542 2842 5947 2794 5296 3790 3994 6805 * * 11 39 5225 * 1705 528 * * 6248 1577 0 K 12 4035 * 3613 2047 * 3737 * 4226 2177 6602 * 3907 * 3737 4277 5469 5361 6973 * 7114 12 57 5327 6166 491 1794 * * 6277 1635 0 E 13 4676 * 3545 2557 * 4259 5395 4306 3990 5675 5884 5182 * 2737 3133 3718 3360 6110 * * 13 0 * * * * * 0 6258 0 1000 L 14 5253 * * * 5595 * * 1818 * 2150 5378 5131 * * * 5683 3869 1789 * 6119 14 0 * * * * 0 * 6201 0 1000 N 15 5416 6657 4126 1519 5300 * 6237 3699 4640 3172 5173 3911 * 3774 5361 4374 6606 4520 * * 15 0 * * * * * * 6227 0 0 T 16 4309 * 5181 2207 * 4961 5498 6281 2893 4366 6319 * * 2718 2641 4723 4163 5407 * 6245 16 36 6302 6353 2322 322 * * 6228 1000 0 E 17 6027 * 1424 2824 * 7258 * * 3679 4296 6089 2832 * 6037 5293 3732 4341 * * 6075 17 38 5268 * 1725 520 0 * 6233 1591 1000 R 18 * * * * * * 5778 5809 2828 * * 6955 * * 428 6442 5920 5240 * 5842 18 12 * 6893 * * * * 6215 0 0 Q 19 5272 * 3372 3714 4916 4937 6343 4156 2421 4199 5641 4059 * 3844 3422 4052 4245 3839 * * 19 0 * * * * * 0 6222 0 1000 I 20 5014 * 5783 5091 3473 4910 3303 4272 5241 2701 4305 3560 5280 4095 5343 5664 6327 4446 * 2811 20 45 6390 5715 2322 322 0 * 6249 1000 1000 F 21 3276 6788 * 2771 5205 * 6834 3290 4201 3312 5181 6190 * 3510 4344 3290 7450 2869 * 5328 21 0 * * * * 0 * 6185 0 1000 L 22 6396 * * * 6555 * * 1000 * 2016 5246 * * * * * 4610 2725 * 6389 22 0 * * * * * * 6249 0 0 E 23 * 6288 2223 2243 * * 6518 5379 3615 * * 3390 * 1967 4984 4958 * 6432 * 5749 23 0 * * * * * * 6249 0 0 A 24 645 3100 * 5225 * 5211 * * * * * * * * * 2699 6229 5451 * * 24 0 * * * * * * 6249 0 0 C 25 1322 3434 * * 6497 4115 * 3959 4711 3608 6176 * * 5754 * 3614 4089 4088 * 5464 25 0 * * * * * * 6249 0 0 I 26 5434 * * * * * * 594 * 2892 * * * 5445 * * 5001 2995 * * 26 0 * * * * * * 6249 0 0 V 27 * 6188 * * * * * 2649 * * 3068 * * * * * 4533 615 * 6443 27 0 * * * * * * 6249 0 0 R 28 * * * * * * 4592 * 2173 * * * * 3922 603 6329 * * * * 28 0 * * * * * * 6249 0 0 I 29 5014 6329 * 6667 5161 * 6597 791 * 3123 5939 5995 * 6694 6334 * 4109 3458 * 6306 29 0 * * * * * * 6249 0 0 M 30 5939 * * * 5569 * * 4710 * 1679 745 * * * * * * 6009 * * 30 0 * * * * * * 6249 0 0 K 31 * * * * * * * * 0 * * * * * * * * * * * 31 0 * * * * * * 6249 0 0 A 32 3276 * 5403 4409 5239 4828 4769 6522 4103 * 4441 * * 2459 3515 2239 3076 6288 * * 32 0 * * * * * * 6249 0 0 K 33 5261 5177 5895 2528 6865 5235 4381 * 2820 4468 * 3597 * 4274 1872 5075 * 4347 * * 33 0 * * * * * * 6249 0 0 R 34 * * * 7074 * 3633 * * 813 * 5939 5116 * 4871 1992 6389 * * * * 34 0 * * * * * * 6249 0 0 N 35 5637 6967 5000 3986 * * 5666 4942 2777 5736 * 5304 5743 3248 3595 2807 2159 4016 * * 35 20 6206 * 1000 1000 * * 6249 1000 0 L 36 3539 5546 * 6306 5939 6334 6989 2493 5112 1513 2102 * * 5910 * 7003 * 5100 * * 36 0 * * * * * * 6249 0 0 P 37 5149 * 3623 5169 5580 5106 3489 7003 3408 4621 7209 4018 4959 4661 5211 2126 2723 7507 * 5160 37 0 * * * * * * 6249 0 0 H 38 5194 6699 * 4971 4393 * 1390 2879 4494 5339 * 6072 * 5660 4750 5083 6333 4526 * 2839 38 0 * * * * * * 6249 0 0 T 39 3962 * 2841 3573 6717 6009 5241 5875 3683 5469 * 2726 5433 3159 5142 2803 4059 6509 * 6104 39 0 * * * * * * 6249 0 0 T 40 5012 6206 1790 1726 * * * * 4667 * 6147 4543 * 2728 * 4827 4538 4705 * * 40 0 * * * * * * 6249 0 0 L 41 * * * * 6177 * * 2593 * 344 6009 * * * * * * 5894 * * 41 0 * * * * * * 6249 0 0 V 42 6329 4106 * 6667 2822 * * 2463 4941 3493 4374 6991 * 4617 * * 3925 2018 6188 4258 42 0 * * * * * * 6249 0 0 N 43 3460 5389 4472 2938 4993 4730 6930 4636 4720 5710 6707 2970 7342 2858 4344 3454 3491 5354 * * 43 0 * * * * * * 6249 0 0 E 44 2834 5621 6497 1957 6334 5405 5692 6376 3026 4390 5109 5825 * 3653 3366 6717 5335 6687 6597 4169 44 0 * * * * * * 6249 0 0 C 45 4379 4470 * * * * * 3166 * 3249 * * * * * 5875 2545 994 * * 45 25 * 5879 * * * * 6249 0 0 I 46 3591 * 6875 4538 4892 * * 2346 3919 3012 3963 * 6623 3983 4613 4574 3671 3234 * 4650 46 23 * 6013 * * 0 * 6243 0 1653 A 47 4092 * 2853 2191 * 6348 6692 5622 2619 6542 * 3696 6466 4211 4759 3034 4236 6201 * * 47 19 6275 * 1585 585 * 0 6211 1000 1000 Q 48 3184 * 4971 3281 6474 5571 4393 4328 4987 2948 5586 5877 * 2122 4534 3530 5836 5213 * 5472 48 15 * 6555 * * * 0 6211 0 1000 S 49 5666 4512 * * * * * 4246 * 1068 4611 4539 6341 * * 4557 3699 2583 5365 * 49 39 * 5244 * * 0 * 6202 0 1747 H 50 4055 6495 4840 3987 * 5434 7089 5453 2057 5639 6654 4994 5277 2645 3428 2454 7311 6895 * * 50 212 4012 3740 599 1556 1461 651 6243 2890 2113 Q 51 3985 * 3373 6168 6320 4259 5473 6142 2579 6028 * 2966 3423 3743 4544 2644 5637 5413 * * 51 180 4422 3829 3127 175 1136 876 6225 1715 3523 R 52 * * 5921 5966 6280 4773 3525 4771 3647 5086 4933 4462 * 3968 1622 4050 4074 4500 6953 4436 52 27 5729 * 0 * 365 2160 6234 1666 3973 F 53 * 5282 * * 670 3776 * 4972 * 3269 * * * 6381 4538 6499 * 5686 * 4277 53 0 * * * * 651 1462 6294 0 1971 N 54 6691 6279 4744 4938 6387 6198 6002 3847 3039 4928 6181 4340 2432 3644 4672 3844 3501 3099 * * 54 37 5302 * 1751 508 0 * 6280 1696 1000 A 55 4525 3658 * * 6360 5993 * 3934 * 2965 5455 * 1353 * * * 6859 2100 * * 55 0 * * * * * * 6250 0 0 K 56 4938 * 2653 4047 6360 6204 5591 7205 4413 7072 * 4929 4951 3729 5624 2370 1953 6008 * 6375 56 0 * * * * * * 6250 0 0 V 57 4217 * 4006 4503 5211 * 6663 3418 4285 4271 4622 4265 3774 5529 3938 3943 3318 2527 * 6064 57 0 * * * * * * 6250 0 0 S 58 3540 * 3803 3995 * 4643 6706 5027 4185 5592 * 5035 3839 4136 3280 2469 3026 4056 * * 58 19 * 6267 * * * * 6250 0 0 M 59 4914 * 2063 3456 3861 7397 5242 3472 * 3001 3347 4394 * 4120 * 5831 4018 4735 * * 59 18 6358 * 1000 1000 0 * 6234 1000 1000 V 60 5444 * * * 2501 * * 1166 * 3008 5356 * * * * * * 2380 * 6173 60 0 * * * * * * 6250 0 0 K 61 * * 4873 4395 * * * 4950 686 3844 * 4433 * 4754 3860 6187 6256 5993 * * 61 0 * * * * * * 6250 0 0 R 62 5175 5754 5789 2748 * * 5873 * 1750 5461 5121 * 6017 2974 2874 3705 4259 6271 * * 62 0 * * * * * * 6250 0 0 A 63 2828 2479 * 5638 * 4239 7192 5874 5787 * 6371 3401 * 3383 2558 3326 6859 3864 * 6017 63 0 * * * * * * 6250 0 0 I 64 6636 * * * 5102 * * 889 * 1793 5356 * * * * * 6549 3360 * * 64 19 6267 * 3000 193 * * 6250 1000 0 D 65 4319 * 2559 922 * * * * 4535 5243 5746 4454 * 5193 4667 5782 5743 6064 * * 65 0 * * * * * * 6250 0 0 S 66 5749 * 3743 4191 4570 3844 4135 4251 3721 4433 5263 3930 * 7118 3724 2811 4915 6066 5221 3098 66 0 * * * * * * 6250 0 0 L 67 5030 * * * * * * * * 114 5208 * * * * * * 5746 * * 67 0 * * * * * * 6250 0 0 I 68 * 5993 * 5888 * * * 617 * 3456 5568 6173 * 6371 * 6329 5011 2900 * * 68 0 * * * * * * 6250 0 0 Q 69 5296 5235 2957 1218 * 6224 * 4461 4242 * * 3400 * 3717 5676 3875 5695 * * * 69 0 * * * * * * 6250 0 0 K 70 * * 6705 4790 * * 6070 * 1349 5874 * 4241 * 3426 1566 4679 7152 * * * 70 0 * * * * * * 6250 0 0 G 71 * * 3249 826 * 2247 6390 * * * 6941 4891 * 4284 6070 * * * * * 71 0 * * * * * * 6250 0 0 Y 72 * 5160 * * 1868 * * * * 3719 6064 * * * * * * * * 720 72 0 * * * * * * 6250 0 0 L 73 5047 * * * 6508 * * 1489 * 1345 3651 * * * * * * 2950 * * 73 20 6174 * 0 * * * 6250 1000 0 Q 74 3839 6479 * 1951 * * * 5115 2430 6352 6564 * * 2739 2639 3736 6158 5405 * * 74 46 6067 5918 0 * * * 6249 1000 0 R 75 * 6493 * * * * * 6427 4874 5488 5871 6386 * 6193 281 * 6292 * * 4556 75 99 5693 4406 0 * 0 * 6222 1833 1000 G 76 * * 1306 3882 * 2878 5786 * 5276 7037 * 3293 * 4569 * 2945 5413 4549 * * 76 383 2416 4442 0 * 760 1289 6124 4243 2671 D 77 4108 * 2273 1324 * 5993 6580 * 3922 4535 * 4302 4755 4038 * 4524 6896 * * * 77 381 2464 4295 0 * 292 2448 6063 4086 2928 D 78 * * 1106 4662 * 3793 * * * * * 2207 * 3835 4681 3728 6158 * * 6870 78 32 5524 * 0 * 0 * 6039 1593 2889 G 79 4885 * 4453 * * 2942 5947 6093 3250 6301 * 2783 3464 3869 2690 3608 3795 * 6932 5635 79 132 3515 * 0 * * * 6058 3505 0 E 80 * 6123 2602 3207 5950 4360 5993 6143 6766 * * 1983 3548 3450 5635 3330 4381 6479 * * 80 115 4189 5532 537 1685 * * 6038 2784 0 S 81 5188 5978 5689 4255 6750 * * 2577 3303 3500 4511 6089 * 4619 4690 4538 2467 2999 6136 5875 81 29 5647 * 0 * 0 * 6011 1533 1652 Y 82 * * * * 2371 * * 4219 * 2466 * * * * * * * * * 806 82 16 6544 * 0 * * * 6003 1000 0 A 83 4330 * 6397 3415 5364 7131 2973 2621 5245 4726 * 4318 * 3945 4275 3467 4756 2599 * * 83 0 * * * * * * 5971 0 0 Y 84 * * * * 4907 * * * * * * * * * * * * * * 49 84 0 * * * * * * 5935 0 0 L 85 5139 * * 5161 * * * 1931 5314 1854 3790 * * * 4708 6080 * 1975 * * 85 0 * * * * * * 5846 0 0 A 86 320 * * * * * * * * * * * * * * 2331 * * * * 86 0 * * 0 * * * 5146 0 0 //