HHsearch 1.5 NAME c3m03B_ FAM FILE c3m03B_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3m03B_.a3m DATE Sat Mar 12 08:45:47 2011 LENG 95 match states, 95 columns in multiple alignment FILT 14 out of 18 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.6 EVD 0.4208 0.3024 SEQ >ss_dssp CCSCCHHHHHHHHTCGGGHHHHHHHHHHHHHHSCHHHHHHCCTTSHHHHHHHHHHHHHHHTCCCCHHHHHHHHTSCHHHHHHHHHHHHHHHTTCC >sa_dssp EEDDDCEEBAEEBEAEEACECADDACEDCDEECDEEDDEEDDCDECCBBAAAABAAADCDECECDCEEABECBEDEDEEACEBAECACDCBEECE >ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC >ss_conf 97565999999974788999999999999974303432033200345899999999998267668999997848899999999999999995309 >Consensus xxxisvxdLxVqfgCxxvxxxAexlLxxYkxxxxxxxxxxxDxsxPxfxxaAvxxackxxKiKVdKxKLxxxsxlkxxxxxxLxxxmekxxxqix >c3m03B_ MSNIGIRDLAVQFSCIEAVNMASKILKSYESSLPQTQQVDLDLSRPLFTSAALLSACKILKLKVDKNKMVATSGVKKAIFDRLCKQLEKIGQQVD >UniRef50_B3S7E8(99-194:232) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S7E8_TRIAD E=3e-05 s/c=0.51 id=32% cov=97% ----SVKELAVFANCIgNAELLAEKLLDRFavdvNSKCANGNNNCIDITKPQFPAAALCVACRHLKVRVSKDKLYSKASISKGMFSNLCESLTACLRQIE >UniRef50_UPI0000D567A0(93-179:241) PREDICTED: similar to origin recognition complex subunit 6 n=1 Tax=Tribolium castaneum RepID=UPI0000D567A0 E=8e-20 s/c=1.13 id=32% cov=93% ---ITVSELCVQLSCTEVKDLAEKILANYQERDTKIK----DLEHPQYVAAAVYTGCKLSNIRVDKIQFRAISRLKVAQWNELLEEFSKFATSL- >UniRef50_B0WD73(100-186:264) Origin recognition complex subunit 6 n=3 Tax=Culicidae RepID=B0WD73_CULQU E=5e-08 s/c=0.68 id=26% cov=92% ---VGIAEICVALGLSQVQREATTLLEAYKRFAGGGSAQEIDFTHPQYATMAVFQACKRQKVKPPKTKLAGFSHLKPAQWTLLEKNWEK------ >UniRef50_Q9ZVH3(93-182:284) Origin recognition complex subunit 6 n=16 Tax=Embryophyta RepID=ORC6_ARATH E=2e-19 s/c=1.07 id=33% cov=91% ---LNVRELAVQFGCVRVIKSVQNVLSSYKERflasLPASRRANADFTRPVFTAAAFYLCAKKQKLKVDKLRLIEVCGTSESEFSCVSTSMT------- >UniRef50_UPI000186E2BA(81-161:221) origin recognition complex subunit, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E2BA E=4e-16 s/c=1.06 id=24% cov=86% ----SIKEICLLTQVCDVKESATQLFEEFKKKCDKIH---YDFEHPMYSCAAVWALCRKNKIKVNTNKLVELSRLKKSELDSLTKKFE------- >UniRef50_D2UXD2(138-226:347) Putative uncharacterized protein n=1 Tax=Naegleria gruberi RepID=D2UXD2_NAEGR E=0.0002 s/c=0.53 id=21% cov=89% ---ISLDDLILTFGCQGIRGSCEKLLEEYKKKFESRYSAEIlkktDFTKPILKVAAFYiTATQTYKFKVDFKKLAEETKTNVKSLSSVVDSM-------- >UniRef50_A8J295(36-115:308) Origin recognition complex subunit 6 n=1 Tax=Chlamydomonas reinhardtii RepID=A8J295_CHLRE E=9e-13 s/c=0.93 id=27% cov=81% -------------SCLQLRPAVEQLLRAYKSRFltslPAEERARADLTRPAFLAGAFLLAAKKHKAKVDRAALTNKMGLTRGELEGALKDMAA------ >UniRef50_C3YGH8(1-245:250) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YGH8_BRAFL E=2e-39 s/c=0.33 id=37% cov=100% QPRASVKDLCVQFGCVGAADLAKDILHRYQDEL-QTKVSDADISQPMFPAAAVYGSAKQLKIKVDKAKLTSIAATRKTVFDKLCIEMTKHAEKIA >UniRef50_UPI00005892C1(1-204:204) PREDICTED: similar to Origin recognition complex, subunit 6 homolog-like (yeast) n=2 Tax=Strongylocentrotus purpuratus RepID=UPI00005892C1 E=7e-70 s/c=0.67 id=43% cov=100% NPTVTIRDLAVQFGCVGVVEHANLVLQSYrkefEEKASEASIDGVDFSKPLFSGAALYTICKRQKIKVDKTKLVEMTGVRRGTFDKLCAEMEKHATQI- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 2145 1049 * 1782 * * * * * * 1 0 * * * * * * 1872 0 0 S 2 * * * * * * * * * * * * 1231 * * 801 * * * * 2 0 * * * * * * 2234 0 0 N 3 * * * * * * * * 2052 * * 1587 * * 2214 * 2249 * * * 3 0 * * * * * * 2234 0 0 I 4 3276 * * * * * * 1582 * 2222 * * * * * * * 1521 * * 4 0 * * * * * * 3242 0 0 G 5 * * * * * 2308 * * * * * 3486 * * * 951 2385 * * * 5 0 * * * * * * 3674 0 0 I 6 * * * * * * * 1308 * 3141 * * * * * * * 1051 * * 6 0 * * * * * * 3674 0 0 R 7 3538 * 3141 * * * * * 1984 * * 3571 3898 * 1666 3618 * * * * 7 0 * * * * * * 3674 0 0 D 8 * * 1013 1193 * * * * * 3898 * * * * * * * * * * 8 0 * * * * * * 3674 0 0 L 9 * * * * * * * 1932 * 438 * * * * * * * * * * 9 0 * * * * * * 3674 0 0 A 10 1308 1051 * * * * * 3141 * * * * * * * * * * * * 10 0 * * * * * * 3674 0 0 V 11 * * * * * * * * * 2285 * * * * * * * 331 * * 11 0 * * * * * * 3674 0 0 Q 12 3538 * * * 3493 * * * * 3445 * * * 855 * 3898 3141 * * * 12 0 * * * * * * 3674 0 0 F 13 3493 * * * 998 * * * * 1650 * * * * * * 3445 * * * 13 0 * * * * * * 3674 0 0 S 14 * * * * * 984 * * * * * 3577 * 2747 * 1935 * * * * 14 0 * * * * * * 3809 0 0 C 15 * 403 * * * * * * * 2663 * * * * * * * 3542 * * 15 0 * * * * * * 3809 0 0 I 16 * 3542 * * * * * 2845 * 3636 * 3670 * 3278 * 3656 2405 2031 * * 16 126 3577 * 0 * * * 3809 1000 0 E 17 * * 3542 1945 * 1580 * * * * * 3577 * 2646 3711 * * * * * 17 0 * * * * * * 3809 0 0 A 18 1967 * * * * * * 3278 * 3636 * * * * * * * 835 * * 18 0 * * * * * * 3809 0 0 V 19 2788 * * 3577 * * * 3711 2634 * * * * 2812 2446 * * 2265 * * 19 0 * * * * * * 3809 0 0 N 20 * * 2822 1994 * 3278 * * 3711 3577 * 3240 3636 * 2663 * * * * * 20 0 * * * * * * 3809 0 0 M 21 3636 * * 3656 * * 3291 * 3670 1858 4175 * * * * 1914 3986 * * * 21 0 * * * * * * 3809 0 0 A 22 434 3278 * * * * * * * * * * * * * * * 2673 * * 22 0 * * * * * * 3809 0 0 S 23 4307 * * 1046 * * * * 3917 * * 3291 * 3711 * 4175 2598 * * * 23 0 * * * * * * 3809 0 0 K 24 * * 3917 2954 * * * * 1394 3291 * 3711 * 2588 * * 3656 * * * 24 0 * * * * * * 3809 0 0 I 25 * * * * * * * 1688 * 968 * * * * * * * 2486 * * 25 0 * * * * * * 3809 0 0 L 26 * * * * 3542 * * * * 259 3670 * * * * * * * * * 26 0 * * * * * * 3809 0 0 K 27 3732 * 3577 1594 * * 3917 * 4175 * * * * 2711 3636 3711 3670 * * * 27 0 * * * * * * 3809 0 0 S 28 2646 * * 1988 * * * * * 3670 * 3732 * * 2737 1814 * * * * 28 0 * * * * * * 3809 0 0 Y 29 * * * * 2010 * * * * * * * * * * * * * * 412 29 208 2896 * 2000 415 * * 3809 1605 0 E 30 * * * 2676 * * * * 990 * * 3577 * 2289 4276 * * * * * 30 118 * 3670 * * * * 3809 0 0 S 31 * * 3800 2213 * * * * 1968 * * * * * 2593 1780 * * * * 31 0 * * * * 0 * 3697 0 1000 S 32 * * * 3086 3656 2954 3986 * 1629 * * * * * 2108 4175 * * * * 32 217 3711 3986 2000 415 * * 3809 1000 0 L 33 2822 2467 3556 * 2031 * * * * 1926 * * * * * * * 3561 * * 33 243 3564 3832 2000 415 * 0 3750 1000 1000 P 34 2402 * 3360 2550 * 3440 * * * * * * 1737 * * 4105 3435 * * * 34 0 * * * * 948 1054 3688 0 1587 Q 35 2006 * * 2629 * 3501 * * 2493 * * 3503 * 2946 * 3247 * * * * 35 0 * * * * * 0 3750 0 1000 T 36 4234 * * 3564 * 2502 * 2493 4190 * * * * * 3247 3648 1899 * * * 36 0 * * * * 0 * 3750 0 1000 Q 37 3124 * * 2653 * * 3542 * 2822 * * 3577 * 3240 3711 2945 * * * 3278 37 253 * 2634 * * * * 3809 0 0 Q 38 3376 * 3373 * * * * 4065 3620 * * 3299 * 3934 2053 2479 * 3666 * * 38 0 * * * * * 0 3565 0 1615 V 39 1474 * 4065 4054 * * * * * * 3373 3299 * 3376 * 3666 * 2769 * * 39 0 * * * * * 0 3565 0 1615 D 40 4054 3299 2296 1753 * 2678 * * * * * 3503 * * 3421 * * * * * 40 90 4054 * 2000 415 982 1018 3565 1000 1615 L 41 2058 * * * * * * 1818 * 3123 * * * * * * 3563 2467 * 3380 41 164 3217 * 2000 415 0 * 3723 1000 1000 D 42 * * 0 * * * * * * * * * * * * * * * * * 42 0 * * * * * * 3809 0 0 L 43 * * * * 1162 * * 2737 * 1623 * * * * * * 3670 * * * 43 0 * * * * * * 3809 0 0 S 44 * * * 2634 * * * * * * * * * * * 1266 1241 * * * 44 0 * * * * * * 3809 0 0 R 45 * * * * * * 1648 * 1790 3986 * * * 3917 1929 * * * * * 45 0 * * * * * * 3809 0 0 P 46 * * * * * * * * * * * * 0 * * * * * * * 46 0 * * * * * * 3809 0 0 L 47 3636 * * * * * * 3278 * 2265 2718 * * 1396 * * * 3711 * * 47 0 * * * * * * 3809 0 0 F 48 * * * * 958 * * * * 3278 * * * * * * * * * 1388 48 0 * * * * * * 3809 0 0 T 49 2663 * * * * * * * 3278 3636 * * 2737 * * 2411 2456 2854 * * 49 0 * * * * * * 3809 0 0 S 50 1388 2747 * * * 3291 * * * * * * * * * 4175 2263 3278 * * 50 0 * * * * * * 3809 0 0 A 51 517 * * * * 3636 * * * * 2178 * * * * * * * * * 51 0 * * * * * * 3809 0 0 A 52 0 * * * * * * * * * * * * * * * * * * * 52 0 * * * * * * 3809 0 0 L 53 * * * * 1944 * * * * 1777 * * * * * * * 1158 * * 53 0 * * * * * * 3809 0 0 L 54 * 3577 * * 2178 * * * * 2424 * * * * * * * * 3542 1241 54 157 3278 * 0 * * * 3809 1000 0 S 55 3542 * * * * 3917 * * * 2673 * * * 2178 * 3240 1834 3577 * * 55 0 * * * * * * 3809 0 0 A 56 751 3711 * * * 3732 * 3291 * 3542 * * * * * 3917 * * * * 56 0 * * * * * * 3809 0 0 C 57 2165 569 * * * * * * * * * * * * * * 3278 * * * 57 0 * * * * * * 3809 0 0 K 58 * * * * * * * * 772 * * * * 3278 1684 * * * * * 58 0 * * * * * * 3809 0 0 I 59 * * * * * * 3577 2565 2043 2701 * * * 3917 2462 * 3278 * * * 59 0 * * * * * * 3809 0 0 L 60 * * * * * * 3636 * * 1580 * 2747 * 1955 * 3732 * * * 3278 60 0 * * * * * * 3809 0 0 K 61 * * * * * * * * 113 * * 3732 * * * * * * * * 61 0 * * * * * * 3809 0 0 L 62 3636 * * * 3278 * * 1396 3670 2925 * * * * * * * 2144 * * 62 0 * * * * * * 3809 0 0 K 63 * * * * * * * * 250 * * * * * 2652 * * * * * 63 0 * * * * * * 3809 0 0 V 64 * * * * * * * * * * * * 3656 * * * * 119 * * 64 0 * * * * * * 3809 0 0 D 65 * * 715 * * * * * * * * 3542 3656 * * 2149 * * * * 65 0 * * * * * * 3809 0 0 K 66 * * * * 3278 * * * 453 * * * * * 3636 * 3542 * * * 66 0 * * * * * * 3809 0 0 N 67 2770 * 3577 * * * * 3732 3278 3711 * 2824 * * * 3670 2108 3986 * * 67 0 * * * * * * 3809 0 0 K 68 3636 * * * * * * * 381 * * * * 3732 3711 * * * * * 68 0 * * * * * * 3809 0 0 M 69 * * * * 3732 * * 3986 * 404 3240 * * * * * * * * * 69 0 * * * * * * 3809 0 0 V 70 2455 * * * * * * 2979 * * 3670 3986 * * 3732 * 2770 2039 * 3577 70 0 * * * * * * 3809 0 0 A 71 2937 * * 1216 * 3656 * * * * * 3636 3670 * * 2737 4307 * * * 71 0 * * * * * * 3809 0 0 T 72 4307 * * 3278 2663 * * 2822 2137 3542 3291 * * * * * 4175 3711 * * 72 0 * * * * * * 3809 0 0 S 73 2737 2842 * * * * * * * * 3636 * * * * 1235 2284 * * * 73 0 * * * * * * 3809 0 0 G 74 3917 * * * * 1455 3656 * 3278 * * 3670 * * 2157 3577 * * * * 74 0 * * * * * * 3809 0 0 V 75 * * * * * * * 3577 * 1112 * * * * * * 2025 2265 * * 75 0 * * * * * * 3809 0 0 K 76 * * * * * * * * 1289 * * 3278 * * 2018 2643 3636 * * * 76 0 * * * * * * 3809 0 0 K 77 * * * 3711 * * * * 1549 * * * 2178 * 2453 * * 2487 * * 77 0 * * * * * * 3809 0 0 A 78 1628 * * * * 1908 * * 3278 * * * * * * 2054 3917 * * * 78 0 * * * * * * 3809 0 0 I 79 * * * 2043 * * * 3240 * * 3577 * * 1755 * 3278 3291 3917 * * 79 0 * * * * * * 3809 0 0 F 80 * * * * 1113 * * * * 1644 * * * * * * * * 2200 * 80 0 * * * * * * 3809 0 0 D 81 3986 * 1474 3636 * * * * * * * 3732 * 3670 * 1925 3656 * * * 81 0 * * * * * * 3809 0 0 R 82 * 3711 * 3732 * 3636 * * 2111 2663 * 3577 * * 3240 2404 * * * * 82 0 * * * * * * 3809 0 0 L 83 3636 * * * * * * * * 434 * * * * * * * 2478 * * 83 0 * * * * * * 3809 0 0 C 84 * 1397 * 2531 * * * * * 2560 * * * * * 3648 3432 3247 * * 84 0 * * * * * * 3750 0 0 K 85 3212 * 3247 2529 * * * 3832 1401 * * * * 3561 * * 3648 * * * 85 0 * * * * * * 3750 0 0 Q 86 * * 3564 1926 * * * * 3432 * * 3501 * 2337 * 1871 * * * * 86 0 * * * * * * 3750 0 0 L 87 * * * * 2493 * * * * 2311 1159 * * * * * * * 2531 * 87 0 * * * * * * 3750 0 0 E 88 3381 * * 879 * * * * * * * * * * * 3433 1902 * * * 88 0 * * * * * * 3551 0 0 K 89 2005 * * * * * * * 657 * * * * * 3101 * * * * * 89 0 * * * * * * 3233 0 0 I 90 * 2346 * * 2423 * 1413 2052 * * * * * * * * * * * * 90 0 * * * * * * 2551 0 0 G 91 831 * * * * 2052 * * * 2346 * * * * * * * * * * 91 0 * * * * * * 2551 0 0 Q 92 * * * 2764 * * * * * * * * * 2052 2346 * 1269 * * * 92 0 * * * * * * 2551 0 0 Q 93 * * * * * * * * 2764 * * * * 586 * 2423 * * * * 93 0 * * * * * * 2551 0 0 V 94 * * * * * * * 534 * 2423 * * * * * * * 3025 * * 94 0 * * * * * * 2551 0 0 D 95 1888 * 2222 1731 * * * * * * * 2222 * * * * * * * * 95 0 * * 0 * * * 2027 0 0 //