HHsearch 1.5 NAME c3lvhD_ FAM FILE c3lvhD_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3lvhD_.a3m DATE Wed Jan 9 17:32:54 2013 LENG 113 match states, 113 columns in multiple alignment FILT 51 out of 55 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.5 EVD 0.4523 -0.7401 SEQ >ss_dssp CCSTTTTSTTHHHHHHHHHTTTSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSTTTSSHHHHHHHCCTTTHHHHHHHCCCTTTCSCT TSHHHHHHHHHHC >sa_dssp EEEEEEECDDDDDEEDEDEEEDEEEEECDEDDDDDCEDDDDDDDEDDEEEDDDEDDDEEEDDEEDEECEDBBCDCEEDEEDCDCCBDDCDCDDDEDDCCD DDDBCCCCDDDDE >ss_pred CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHCCC >ss_conf 9630200807999999999999999999999999999999999999999999999999999999999999984115122443221122222222222222 2222221221159 >Consensus xxxxxxEEpExIreWReeqaxxIeeKDeeEekxkxEixekAxkeiddFYxxrxxqxEknkxxNReaEkxFleqxdadxxxxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxx >c3lvhD_ QADRLTQEPESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKAFYQQPDADIIXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXX >UniRef50_A8PXH5(188-263:319) Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PXH5_MALGO E=1e-08 s/c=0.80 id=28% cov=64% --EDIDEETEALRTWREQQADDIARREAQAERHRAEAVSKAEQDIDQFYANYNAQKEKNIKKNKEAEARFLEQ--------------------------- ------------- >UniRef50_Q9SKU1(102-174:338) Expressed protein n=15 Tax=Magnoliophyta RepID=Q9SKU1_ARATH E=3e-13 s/c=1.04 id=21% cov=62% --NEMREEGFQRREWRRLNTIHLEEKEKKEKEMRNQIITEAEDFKKAFYEKRDKTIETNKTDNREKEKLYW----------------------------- ------------- >UniRef50_Q74Z94(36-105:157) AGR309Cp n=1 Tax=Eremothecium gossypii RepID=Q74Z94_ASHGO E=2e-12 s/c=1.06 id=24% cov=63% -----SDSSEPIRKWQERREAEIAERDESEAAATQRLQAEAIKHIDDFYEVYSKKKQQQVEQARREAEEFLQQRD------------------------- ------------- >UniRef50_A8J7K1(113-177:228) Clathrin light chain n=1 Tax=Chlamydomonas reinhardtii RepID=A8J7K1_CHLRE E=3e-10 s/c=1.02 id=24% cov=51% -------EPEAADprvEWRKQNAETLKKKDATESAAKTKVKDSAAAHLAKFYEVRTTTLTQRKANNR--------------------------------- ---------------- >UniRef50_D0NEK7(95-168:249) Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NEK7_PHYIN E=2e-11 s/c=0.94 id=16% cov=66% ----VVEEDNELTKFMLEYDEKIALKAQEQEKVAIECKVKAEENMAQFLAERQRIKESKMQSNRVFEQATLEKMVADL---------------------- ------------- >UniRef50_B9WFP8(103-172:225) Clathrin light chain, putative n=8 Tax=Saccharomycetales RepID=B9WFP8_CANDC E=1e-10 s/c=0.97 id=21% cov=38% ------SESQAIKEWKQRRDLEIEEREKLNSKKKEEIIEKAKSTIDDF---------------------------------------------------- ------------- >UniRef50_A9TG26(147-216:380) Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TG26_PHYPA E=4e-14 s/c=1.13 id=27% cov=52% ------QESETLRQWKRKKELELQEKQRETQIKQDRILEHAAIERENFYKEREVQIEEKKRLNR------------------------------------ ------------- >UniRef50_C1MYY1(145-221:267) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MYY1_9CHLO E=9e-14 s/c=1.02 id=30% cov=50% -APTMEQEqfsSNAMAEWRAEQARLIAEKDAAEQRELQVIREEAQAERELMYSQREKQLD---------------------------------------- ---------------- >UniRef50_C4Q1X1(40-105:189) Expressed protein n=2 Tax=Schistosoma RepID=C4Q1X1_SCHMA E=1e-07 s/c=0.87 id=33% cov=41% ---QVDEEPECIKRWAISFKKRIEVKDDAERKSMSMLEEQGLKDLHEW---------------------------------------------------- ------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * Q 1 * * * * * * * * * * * * * 654 1456 * * * * * 1 0 * * * * * * 1622 0 0 A 2 668 * * * * * * * * 2342 * * * * * * * 2529 * * 2 0 * * * * * * 2334 0 0 D 3 * * 1586 1422 * * * * * * * 2826 2711 * * * * * * * 3 0 * * * * * * 3006 0 0 R 4 * * 3035 1675 * * * * * * * 3370 * 2355 2732 * 3033 * * * 4 0 * * * * * * 3491 0 0 L 5 * * * * * * * 3339 * 2470 1702 * * * 3713 * * 1569 * * 5 0 * * * * * * 3796 0 0 T 6 3198 * 2851 3732 * * * * * * * * * 3632 2392 3059 2434 3309 * * 6 0 * * * * * * 4268 0 0 Q 7 * * 3872 954 * * * * 4771 * * 4899 * 2201 * 3287 5297 * * * 7 0 * * * * * * 4582 0 0 E 8 * * 4007 236 * * * * 5153 * * * 4856 * * 5250 * * * * 8 57 4686 * 1585 585 * * 4863 1000 0 P 9 5678 * 4117 * * 3149 5206 * * * * * 1035 * * 2040 4270 * * * 9 0 * * * * * * 4848 0 0 E 10 4556 * * 703 3694 * * 5418 5289 * * 3388 * 4205 * * 3899 * * * 10 29 5628 * 2000 415 * * 4865 1000 0 S 11 1995 4375 * 4176 * * * * 2848 5519 * * 2597 5090 6436 2986 3932 3524 * * 11 0 * * * * * * 5085 0 0 I 12 4798 * * * 5461 * * 1271 * 1979 3690 * * * 5160 * 4883 2902 * * 12 0 * * * * * * 5142 0 0 R 13 5128 * 4116 3936 * * * * 2389 * * 5267 * 3408 1128 * 4371 4996 * * 13 52 4824 * 1585 585 * * 5073 1000 0 K 14 3992 * 6064 1611 * * * * 1667 4906 * 5782 * 3303 4485 4428 5510 6153 * * 14 0 * * * * * * 5097 0 0 W 15 * * * * 3072 * * * * * * * * * * * * * 183 * 15 0 * * * * * * 5097 0 0 R 16 4485 * * * * * * * 2149 * 4419 4350 * 5735 701 * * * * * 16 0 * * * * * * 5097 0 0 E 17 2727 * * 1030 * * * 4485 4836 4419 * * * 4124 2511 * * * * * 17 0 * * * * * * 5097 0 0 E 18 * * 5164 1229 * * * * 3487 4695 * * * 2655 2534 3884 5742 * * * 18 0 * * * * * * 5097 0 0 Q 19 * * * * 3456 * 5303 * 3644 * * 2283 * 1677 2887 * 5544 * 4350 3647 19 0 * * * * * * 5097 0 0 R 20 1598 * 2756 2942 * * * * 2678 * 4492 5193 * 3468 5999 * 4755 5617 * * 20 0 * * * * * * 5097 0 0 K 21 3243 * 4621 2425 * * * 3305 2124 2372 * 5437 * 4798 5149 4872 * 5488 * * 21 0 * * * * * * 5097 0 0 R 22 5742 * 5510 1934 * * 4506 5652 3840 3537 4105 * * 4105 2022 5001 3573 * * * 22 0 * * * * * * 5097 0 0 L 23 * * * * * * * 972 * 1029 * * * * * * * * * * 23 0 * * * * * * 5097 0 0 Q 24 2235 * * 1327 * * 5488 * 3618 4350 * * * 2983 5001 3673 * * * * 24 0 * * * * * * 5097 0 0 E 25 4335 * 3914 1296 * * * 6110 1780 4419 * * * * 4259 * 5193 4485 * * 25 0 * * * * * * 5097 0 0 L 26 * * * * * * * * 846 4958 5668 * * 5001 1471 * * * * * 26 0 * * * * * * 5097 0 0 D 27 3512 * 884 1880 * * * * 4350 * * * * 4330 * * * * * * 27 0 * * * * * * 5097 0 0 A 28 2352 * 3416 1879 * * * 5918 2850 5488 * * * 3460 2889 5600 * 6110 * * 28 0 * * * * * * 5097 0 0 A 29 2239 * * 1517 * * * * 2966 5829 * 5043 * 4120 4141 3749 4836 4672 * * 29 0 * * * * * * 5097 0 0 S 30 2876 * 3551 895 5437 * * * * * * 4833 * 4419 * 3226 5103 * * * 30 0 * * * * * * 5097 0 0 K 31 2911 * 4716 1745 * * * * 1920 * * 4350 * 4126 3474 3835 * * * * 31 0 * * * * * * 5097 0 0 V 32 2682 * * 2307 * * * 4039 1797 * * * * 5293 2471 4349 * 4702 * * 32 0 * * * * * * 5098 0 0 M 33 3273 * * 3194 * * 5505 * 1921 2900 3538 * * 4655 2951 4484 * 3891 * * 33 0 * * * * * * 5098 0 0 E 34 4417 4425 * 4257 * * 5542 3749 1735 3647 4484 * * 4155 2043 * 5733 5981 * * 34 0 * * * * * * 5098 0 0 Q 35 2511 * 3648 2170 * * 6010 3504 4043 * * 4496 * 2572 * 3938 4833 4460 * * 35 0 * * * * * * 5098 0 0 E 36 4995 * 4683 789 * * * * 4833 * 4484 * * 2996 3805 4443 * 5146 * * 36 0 * * * * * * 5098 0 0 W 37 4613 4417 * * 4349 * * 1839 * 2055 4921 4356 * * * * 3600 4833 2800 * 37 0 * * * * * * 5098 0 0 R 38 * * * 4484 * * * 2084 2121 3700 4010 * * 3559 2864 5707 * 3195 * * 38 0 * * * * * * 5101 0 0 E 39 3014 * 3033 1132 * * * * 3388 * * 5575 * 5879 * 3729 5450 3920 * * 39 0 * * * * * * 5101 0 0 K 40 3425 * 5295 1890 * * 5085 5191 1765 * * 4994 * 2881 5707 4185 5705 * * * 40 0 * * * * * * 5101 0 0 A 41 326 * * * * 3251 * * * * * * * * * 3360 * * * * 41 0 * * * * * * 5101 0 0 K 42 3376 * 6013 1837 * * 5666 3587 1994 4484 * * * 3187 3323 * * * * * 42 0 * * * * * * 5101 0 0 K 43 2543 * 3848 3266 * * * 5085 1144 * * * * 3196 5111 4830 * * * * 43 0 * * * * * * 5101 0 0 D 44 4068 * 2544 1730 3118 * 3060 * * * * 3742 * * * 4334 4830 * * 3779 44 0 * * * * * * 5101 0 0 L 45 * * * * * * * 1486 3287 1511 3393 * * * 3775 * * 5543 * * 45 21 6116 * 2000 415 * * 5101 1000 0 E 46 3366 * 1430 1790 * * 4484 * 4140 * * 3916 * * 4856 5649 * 5605 * * 46 0 * * * * * * 5101 0 0 E 47 4133 * 1327 2009 * * * * 4363 4286 * 3504 * 3519 * 5593 * * * * 47 0 * * * * * * 5101 0 0 W 48 * * * * 652 * * * * * 4286 * * * * * * * 1678 * 48 0 * * * * * * 5101 0 0 N 49 * * 4505 * 5596 * 5505 * * 3448 * 4619 * 4359 * * * * * 450 49 0 * * * * * * 4990 0 0 Q 50 2474 * 3127 2168 * * * * 2340 * * 5007 * 5545 3873 3241 6510 4379 * * 50 0 * * * * * * 4990 0 0 R 51 * * * 2234 * * 5787 * 2458 * * 2179 * 2999 2727 5311 * 3941 * * 51 0 * * * * * * 4990 0 0 Q 52 * * * * 4592 * 5787 4446 * * * * * 4114 988 * * * * 1588 52 0 * * * * * * 4990 0 0 S 53 3080 * 4116 2300 * 5390 4427 5596 5642 5722 * 1847 * 3235 5622 4444 4622 * * * 53 0 * * * * * * 4990 0 0 E 54 4252 * 4099 2150 5403 * * 5642 2394 5622 * 4308 * 3313 3002 * 3958 3849 * * 54 0 * * * * * * 4990 0 0 Q 55 5787 * * * * * * 4396 1729 4789 5477 4061 * 1684 5872 5390 2808 5698 * * 55 0 * * * * * * 4990 0 0 V 56 5311 2993 * * * 5317 * 2469 1886 2009 * 5818 * * 3911 * * 4631 * * 56 0 * * * * * * 4990 0 0 E 57 3505 * 3535 821 * 5574 * * 6106 * * * * 3456 * 3899 4622 5317 * * 57 0 * * * * * * 4990 0 0 K 58 * * * 4504 * * * * 1084 5522 * 3108 * 3247 4817 3293 3270 * * * 58 0 * * * * * * 4930 0 0 N 59 4108 * * * * * * 5482 2876 * * 1328 * 4900 4488 3397 2515 4756 * * 59 0 * * * * * * 4835 0 0 K 60 * * * * * * 5018 2998 1046 * 2944 * * 5622 2918 * 4697 4696 * * 60 0 * * * * * * 4786 0 0 I 61 2118 * 4253 4016 * 4205 * 5275 3398 4969 * 3503 * 3221 3111 4623 3779 5375 * * 61 0 * * * * * * 4758 0 0 N 62 2691 * 3913 3008 * * 3974 * 3594 4087 * 2595 * 4060 * 2554 5155 5305 * * 62 0 * * * * * * 4758 0 0 N 63 3645 * * * * * * * * * * 206 * 5567 * 4969 * * * * 63 0 * * * * * * 4758 0 0 R 64 * * * * * * * * 2557 4238 * * * * 364 * * * * * 64 0 * * * * * * 4758 0 0 I 65 3999 * 3985 1276 * 5285 * 4995 3948 * * 4105 * 4186 4077 * * 2581 * * 65 35 5377 * 2000 415 * * 4444 1000 0 A 66 1343 * 3381 4077 3908 * * * 2898 * * 3857 * * 3625 3957 4819 * * * 66 0 * * * * * * 4444 0 0 D 67 4077 * 4068 277 * * * * * * * 4168 * * * * * * * * 67 37 5318 * 1585 585 * * 4444 1000 0 K 68 2820 * * 1700 * * * * 1260 * * * * 2912 * * * * * * 68 0 * * * * * * 4444 0 0 A 69 1715 * 4079 2120 * * 4371 4886 3990 3012 * * * 5165 4759 3790 * * * * 69 59 4652 * 2000 415 * * 4385 1000 0 F 70 * * * * 492 * * * 3810 5143 * * * * * * 3831 * 5068 3481 70 0 * * * * * * 4385 0 0 Y 71 4237 * * * * * 4477 3553 * 1048 * * * * * * * 2686 4107 3062 71 0 * * * * * * 4122 0 0 Q 72 2878 4694 * 1334 * * * * 2525 * * 4662 * 2576 * 4390 * * * * 72 0 * * * * * * 4015 0 0 Q 73 3431 * 4308 1566 * * * * 2697 * * * * 1455 * * * * * * 73 0 * * * * * * 3924 0 0 P 74 3447 * * * * * * 3224 * 4312 3154 * 3283 3736 1267 * 4463 * * * 74 0 * * * * * * 3726 0 0 D 75 * * 683 2215 4343 * * * * * * * * * * * * 3154 * * 75 0 * * * * * * 3726 0 0 A 76 572 * 3394 * * 2954 * * * * * * * * * 3275 * * * * 76 0 * * * * * * 3222 0 0 D 77 * * 214 * * * * * * * * * * * * * 2858 * * * 77 0 * * * * * * 3065 0 0 I 78 2673 * * * * * * 1709 * 1291 * * * * * * * 2959 * * 78 0 * * * * * * 2813 0 0 I 79 * * * * * * * 656 * 1453 * * * * * * * * * * 79 0 * * * * * * 1614 0 0 X 80 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 80 * * * * * * * 1000 0 0 X 81 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 81 * * * * * * * 1000 0 0 X 82 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 82 * * * * * * * 1000 0 0 X 83 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 83 * * * * * * * 1000 0 0 X 84 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 84 * * * * * * * 1000 0 0 X 85 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 85 * * * * * * * 1000 0 0 X 86 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 86 * * * * * * * 1000 0 0 X 87 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 87 * * * * * * * 1000 0 0 X 88 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 88 * * * * * * * 1000 0 0 X 89 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 89 * * * * * * * 1000 0 0 X 90 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 90 * * * * * * * 1000 0 0 X 91 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 91 * * * * * * * 1000 0 0 X 92 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 92 * * * * * * * 1000 0 0 X 93 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 93 * * * * * * * 1000 0 0 X 94 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 94 * * * * * * * 1000 0 0 X 95 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 95 * * * * * * * 1000 0 0 X 96 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 96 * * * * * * * 1000 0 0 X 97 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 97 * * * * * * * 1000 0 0 X 98 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 98 * * * * * * * 1000 0 0 X 99 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 99 * * * * * * * 1000 0 0 X 100 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 100 * * * * * * * 1000 0 0 X 101 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 101 * * * * * * * 1000 0 0 X 102 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 102 * * * * * * * 1000 0 0 X 103 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 103 * * * * * * * 1000 0 0 X 104 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 104 * * * * * * * 1000 0 0 X 105 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 105 * * * * * * * 1000 0 0 X 106 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 106 * * * * * * * 1000 0 0 X 107 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 107 * * * * * * * 1000 0 0 X 108 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 108 * * * * * * * 1000 0 0 X 109 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 109 * * * * * * * 1000 0 0 X 110 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 110 * * * * * * * 1000 0 0 X 111 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 111 * * * * * * * 1000 0 0 X 112 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 112 * * * * * * * 1000 0 0 X 113 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 113 0 * * 0 * * * 1000 0 0 //