HHsearch 1.5 NAME c3kt9A_ FAM FILE c3kt9A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3kt9A_.a3m DATE Sat Aug 28 16:22:15 2010 LENG 102 match states, 102 columns in multiple alignment FILT 110 out of 841 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.8 EVD 0.4260 -0.5320 SEQ >ss_dssp CCCEEEEEETTSTTCEEECCBTCEEEECSSTTTCCCCTTSCSSCEEEEEETTTTEEEEEECSSSCCEETTEECCBTCEEEECTTCCEEEETTEEEEEEEE EC >sa_dssp EDDCACAABDEDDEBDCEBDCEEDCDBBCCEEAEBECEEACEEAACACABBEEBCACACADBEDCAABDDEEBCDEEDDDADEECBACAADEDCBACBCC DE >ss_pred CCEEEEEEECCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCEEECCEEEECCCEEECCCCCEEEECCCCEEEEEEE EC >ss_conf 9608999967898521993698628955764123335554433699999468989999878998739814875237179947899999916616899997 09 >Consensus xxxxcxLxxxdxxxxxixLxxxxxxxiGRxxxxxixdxxvSRxHaxixxxxxxxxxxvxxxssNGtxvngxxlxxxxxxxLxxGDxixlxxxxxxfxvef ee >c3kt9A_ MMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETKITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELYPYIVEF EE >UniRef50_Q54WT0(12-99:1032) Putative uncharacterized protein n=15 Tax=cellular organisms RepID=Q54WT0_DICDI E=0.0001 s/c=0.55 id=14% cov=84% -----------PSSQVVEIEQGKDFLFGSSLDcnLRLQIYGCSREHAIIKFN-KQGRPTISNLSKfNVTCLNGSTVENGTSALLNDGDTIVMYGKKFTFK ----- >UniRef50_B4AWD3(137-244:246) FHA domain containing protein n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AWD3_9CHRO E=9e-07 s/c=0.51 id=22% cov=93% -----TLKLTHTSGKEFFAMAGQKIYIGRrggtkkpHPEIDLTDipyaERVSRPHAHIFWDeQSNHYMIVDNQSTNGTKINGEFLKPWHPYPLYDGAILE LGKEQYIkFTVQ--- >UniRef50_Q4QEY8(1-102:1270) Putative uncharacterized protein n=3 Tax=Leishmania RepID=Q4QEY8_LEIMA E=2e-05 s/c=0.49 id=22% cov=77% ----------DGEIHRHFLLPDQTYTLGRK-TCRIllpaAEPSISRHHATIFVAAMPRYsvldpsaqleIRIEDVSKHGTFVDRERIGKGNSRFLYPEDR IRL------------- >UniRef50_Q8IEN7(457-553:561) Fork head domain protein, putative n=2 Tax=Eukaryota RepID=Q8IEN7_PLAF7 E=3e-05 s/c=0.51 id=18% cov=22% --------SNNNEPQKIlHIHDKSYYLIGK---------------------------------------------------------------------- --- >UniRef50_Q23J97(182-286:776) FHA domain containing protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q23J97_TETTH E=4e-05 s/c=0.47 id=18% cov=33% -----------------------------------------------------------------SFVNGEILEKLFDKELQTGDILTFALSTRSYEI-- -- >UniRef50_A4BHK0(1-108:125) FHA domain protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BHK0_9GAMM E=1e-06 s/c=0.50 id=17% cov=97% -MPILMQIKDDIVQNKFPLEEKtVSIGRGTDNDIQLDDKTVSANHAWLEFLPGDDgqpgsYRLIDLKSTNGSFVNEKKITEQD---VRHNDVLRIGFVSF KFVDEnehrFEE >UniRef50_B9RXR7(60-165:665) Tyrosyl-DNA phosphodiesterase, putative n=1 Tax=Ricinus communis RepID=B9RXR7_RICCO E=3e-06 s/c=0.50 id=20% cov=95% IQKIGFLVPlklnleEDTSIPKISLSEGPNAI--GRSHVSVSDKRLSRNHLSLTTSV-DGSAFLTPEGTNPVVIKSGDQRkklsPGEKASINSGDVIELI PGHHFFKYE--- >UniRef50_C3XYI2(4-97:1252) Putative uncharacterized protein n=2 Tax=Branchiostoma floridae RepID=C3XYI2_BRAFL E=1e-05 s/c=0.54 id=24% cov=28% --------------------------------------------------------------------------QNAAVRLAPGDMIQFGFGGMPYELVV ED # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * 1645 * 2864 1266 * * * * * * 2976 * * 1 0 * * * * * * 3506 0 0 M 2 * * * * * * * * * 3960 851 * * 2667 * 4009 * 2628 * * 2 0 * * * * * * 5232 0 0 R 3 4627 * * * * * * * 2068 * * * 1376 4437 1789 * * * * * 3 0 * * * * * * 5579 0 0 V 4 4711 * * 2506 * 4761 * 1867 4615 4737 3701 * * 4157 5049 4336 * 2444 * * 4 45 * 5038 * * * * 5929 0 0 C 5 5056 893 * * * 3726 5707 * * 2067 * * * * * 4796 * 4008 * * 5 47 * 4968 * * 0 * 6111 0 1000 W 6 5295 * * * 3975 * 5690 3591 5399 3050 5011 5504 * 5629 4689 4917 2614 2617 4431 2773 6 34 5434 * 1585 585 0 * 6554 1000 1000 L 7 * * * * * * * 2690 * 356 * * * 5434 * * * 5670 * 5559 7 0 * * * * * * 6908 0 0 V 8 4733 5688 * 5749 5525 * * 2871 2390 3513 * * * 3599 4847 * 6103 1554 * 6033 8 0 * * * * * * 7012 0 0 R 9 5011 2521 5580 5883 6783 4666 * 4557 5726 4169 * * 1988 5116 4204 2142 * 5077 * * 9 65 4512 * 2278 333 * * 7173 1804 0 Q 10 4295 3967 3065 2708 * * 5959 4054 4798 3327 5211 6014 4481 4253 5070 3567 3796 3739 * * 10 19 6288 * 1000 1000 * * 7240 1000 0 D 11 4766 * 1410 3111 5703 3119 5275 * 5079 6003 * 2946 7699 * * 3771 4473 * * 6259 11 0 * * * * * * 7201 0 0 S 12 3959 * 4309 3714 * 1901 * 5982 4587 6372 * 3249 2625 4775 4968 3998 4103 * 6040 * 12 63 5223 5988 567 1622 * * 7296 1677 0 R 13 5183 * 4732 3682 * 3595 6389 * 5357 5502 * 4518 6100 3448 3996 1840 2263 5995 * * 13 107 5375 4408 540 1679 * 0 7307 1638 1000 H 14 5382 6348 5075 3381 4707 3775 3959 3632 4706 2933 4739 5533 5457 3852 4044 3368 5321 4428 * 4942 14 37 * 5299 * * 1012 988 7097 0 2297 Q 15 5104 4544 5052 3033 6523 4853 3957 5146 3319 4300 5852 5223 2983 2228 4122 4902 6412 * * * 15 73 4916 5959 977 1023 431 1954 7279 2097 2615 R 16 3931 * 3837 4247 6260 5572 * 7389 3276 6472 5053 6543 2234 4549 2397 3735 4319 4442 * * 16 36 5347 * 1000 1000 0 * 7330 1258 1592 I 17 6122 * * * 3049 * 6418 1360 * 3621 7215 * 6761 * 6338 7531 6240 1979 6487 3825 17 36 8724 5477 0 * * * 7288 1000 0 R 18 4351 * 4025 3089 4692 6140 4280 3710 4588 4541 * 6602 2832 4592 3189 4170 5117 4182 * 3931 18 35 * 5400 * * * 0 7274 0 1663 L 19 5236 * 6189 * * * * 3554 5262 478 * 6072 4446 * * 6369 * 4865 * 5425 19 79 6063 4717 1000 1000 957 1044 7217 1000 2553 P 20 6073 * 4359 3708 * 5149 4024 5271 4789 3249 5349 5006 1987 4037 * 2983 3834 5324 * 6307 20 156 4457 4131 1153 862 0 * 7231 2532 3052 H 21 4190 * 2315 2695 5680 4707 3490 6545 4721 4625 * 4841 2886 4208 5991 4944 4330 * * 4976 21 35 * 5370 * * 0 * 7221 0 2672 L 22 * * 4390 3839 6835 1343 * 6117 3611 6922 * 4065 4946 3508 3875 3565 5196 * * 6058 22 68 5134 5832 0 * 985 1015 7263 2142 1591 E 23 6237 * 3659 2297 5137 2702 * * 2789 4757 * 4857 5519 2846 5649 4319 6627 3948 * * 23 142 4652 4218 1141 872 1510 624 7291 2470 2240 A 24 4749 * 6183 2791 * 5095 5258 4180 5398 4871 6069 3492 2790 4055 4204 3764 2839 4120 * 8654 24 75 4724 6285 2808 222 0 * 7196 2729 3351 V 25 5355 5279 * * 3378 * 6692 3273 6174 3290 5362 5028 * 4719 * 6713 3927 1816 4264 3057 25 36 * 5354 * * 0 * 7246 0 1000 V 26 5838 * 5608 4852 4284 4365 * 2247 6530 3112 6461 5384 * * 5241 4763 2362 2549 * 5246 26 86 4444 6427 0 * 0 * 7279 2749 1682 I 27 6554 * * * 3352 * * 1440 * 2570 * * * * 3879 5400 5826 2028 * * 27 13 6821 * 3000 193 * 0 7235 1000 1000 G 28 4967 * * * * 121 * * * * * * * 6024 * 4914 * * * * 28 12 6915 * 1000 1000 0 * 7235 1000 1000 R 29 * * * 5732 * 6504 * * 4121 * * 6765 * 5016 344 6374 4079 * 6192 * 29 174 3139 * 2162 365 * * 7164 3933 0 G 30 3645 * 2882 4960 * 2043 3945 * 4191 6191 * 4527 6924 5999 4140 2389 4027 * * * 30 125 5820 3935 1322 737 * * 7163 1549 0 P 31 3487 3806 5143 3989 * 5336 * 6243 4199 4810 * 4861 1949 4435 5592 2578 4051 4976 * * 31 106 4116 6243 1375 703 376 2124 6912 3682 2975 E 32 6061 * 1760 2455 6108 4415 3668 5366 5351 5007 * 4903 4917 3884 6483 3767 4313 5768 * * 32 80 4209 * 1383 697 1000 1000 6938 3011 1759 T 33 4476 2435 * 6187 4306 5341 5591 3565 * 2609 6504 3399 * * 5258 3677 3272 3346 * * 33 29 5668 * 1326 734 0 * 6953 1682 1000 K 34 4633 6511 2757 4523 4578 2864 5594 6161 3873 5802 6065 5605 5368 2619 3019 4052 5867 4876 * * 34 114 3724 * 1627 565 * * 7035 3486 0 I 35 * 5347 6519 5759 4771 5692 * 1377 * 1763 6345 * 5587 * * * 6232 2855 * 5280 35 210 2881 * 1472 645 * * 7037 4294 0 T 36 3404 * 3126 4441 4964 4975 5884 6691 5022 5455 6345 3928 4116 3136 3481 3535 3555 3811 * 5695 36 211 2875 * 1549 603 * * 7037 4548 0 D 37 * 4973 850 4900 5888 5485 4750 4246 * 5576 * 5152 5020 * * 3185 * 5701 * 4591 37 34 5414 * 2171 362 * * 7037 1703 0 K 38 4423 * 5259 4500 * 4525 7137 5090 2517 4947 * 3879 2256 4070 3222 4270 3662 6719 * 6428 38 47 4955 * 1000 1000 * * 7045 2164 0 K 39 4124 6849 * 6211 5812 2999 4957 * 3147 5456 4635 5021 * 6069 2372 2928 2665 5677 * 5515 39 45 5011 * 1563 596 * * 7045 2185 0 C 40 3765 3411 * * 6633 * * 1581 * 3461 5510 * * * * * * 1414 * * 40 35 5365 * 0 * * * 7045 1258 0 S 41 6206 * 5241 * * 6031 * * * * * * * * * 82 * * * * 41 0 * * * * * * 7045 0 0 R 42 4107 * * * * 3708 5376 * 3112 * * 5286 * * 611 4889 6419 * * * 42 0 * * * * * * 7045 0 0 Q 43 6557 * * 4496 6773 * 3427 6762 2597 4146 * 3017 6437 2948 2247 4781 4864 4088 * 7137 43 0 * * * * * * 7045 0 0 Q 44 * * * * * * 367 * * * * * * 2257 * * * * * 6029 44 56 6330 5290 1000 1000 * * 7041 1000 0 V 45 1058 2973 * * 3840 4822 * 4721 * 3149 6493 * * * * 6819 * 3100 * * 45 0 * * * * * 0 7001 0 1683 Q 46 3842 5334 * 2475 6653 * 3990 4966 3222 4924 6829 * * 3612 2705 3637 3771 4051 6555 6379 46 0 * * * * 0 * 7001 0 1683 L 47 * 5221 * * 3835 * * 1106 * 1849 6330 * * * * * * 2753 * * 47 118 4591 4750 3320 152 * * 7041 2390 0 K 48 6784 5332 5316 4302 3296 * 5602 3478 3006 4442 * 5333 * 5152 3462 5377 2947 3273 4087 4382 48 100 5435 4517 1636 560 * 0 7032 1688 2398 A 49 2242 6043 * 6187 3123 * * 4721 3928 3691 5674 * 5490 6328 3426 4851 4103 2944 5276 3878 49 30 6446 6812 1000 1000 819 1206 6999 1000 3572 E 50 4099 * 1589 3467 * 6593 6950 6432 5017 4222 6632 3036 6751 6208 4366 3109 3554 * * * 50 228 6385 2898 0 * 333 2277 7081 1000 2607 C 51 3628 4506 6340 3998 3904 3588 * 4729 6210 3532 6747 5597 3069 4030 4448 4963 4660 3979 6121 3224 51 119 6733 3847 0 * 625 1508 6977 1000 4593 N 52 3950 * 2857 2604 * 4405 5295 6470 4059 6123 6493 3351 * 3563 5243 3130 3734 4319 * 6062 52 0 * * * * 133 3503 6960 0 3980 K 53 3913 * 2854 4110 * 2318 5701 * 3837 6451 * 3194 4824 4496 5416 3665 3430 4259 * * 53 123 5501 4073 1848 469 0 * 7066 1647 1000 G 54 4711 6165 4148 4630 6566 1179 4039 * 3552 6721 * 4089 6611 4634 4814 4132 6521 * 6786 5545 54 48 5325 6985 2543 272 685 1403 6920 1633 3040 Y 55 3916 5101 6958 6056 4508 5537 5508 6550 3328 5050 4651 4198 * 3802 3807 3165 3563 3821 5538 2967 55 81 4192 * 2379 308 542 1676 7047 3211 2191 V 56 3363 6768 * 6043 3877 * 6073 3584 * 3086 6404 * 5506 5852 4671 * 7070 1538 4416 3249 56 26 * 5819 * * 0 * 7063 0 1000 K 57 5304 4457 * 5280 3234 6643 7000 4160 4973 2350 * * * 4603 3290 5542 3218 3591 4805 3261 57 52 6034 5648 0 * 0 * 7052 1000 1565 V 58 4820 5554 * 6399 4837 * * 1985 * 2657 5632 * * 6123 6038 * 4644 1381 * 6416 58 13 6804 * 0 * 963 1038 7038 1000 1666 K 59 5336 * 1776 2994 * * 4998 5982 2550 * * 4269 * 4605 3944 4579 3118 5958 6825 * 59 0 * * * * 0 * 7061 0 1000 Q 60 * 5322 1343 5092 6472 5364 * 6958 * 2360 5593 5357 5019 3382 5238 4406 5546 4834 * 6495 60 0 * * * * * * 7058 0 0 V 61 6382 * 5779 5182 6751 3760 5767 3315 4756 1411 6013 3365 * 5428 4806 6923 3499 4080 * * 61 314 2355 * 843 1177 * * 7058 5078 0 G 62 6011 * * 6995 * 1666 4196 * * * * 6418 6223 * * 781 * * * * 62 18 6345 * 0 * * * 7058 1000 0 V 63 4181 * * * * 6233 7103 6211 3229 5298 * 5521 6234 4838 3548 1835 1856 3905 * * 63 206 2909 * 220 2825 * * 7058 4218 0 N 64 6050 * 6254 * * 6424 5627 * * * * 248 * * 5377 4660 6642 * * 5365 64 18 6363 * 0 * * * 7058 1000 0 P 65 6391 * * 6011 * 504 5527 * * * * * 2770 * 6511 5448 6612 4526 * 6435 65 0 * * * * * * 7058 0 0 T 66 5764 4367 * * * * * 4475 * 5536 * * * * * 2435 796 3239 * * 66 0 * * * * * * 6925 0 0 S 67 5273 5377 5776 * 1590 4434 5145 5251 5167 3971 7833 * * 6452 4241 4899 4207 4290 4672 2638 67 0 * * * * * * 6821 0 0 I 68 6156 6385 * * * * 4985 2385 * 1819 * * * * * * * 1140 * 6169 68 56 4713 * 2234 345 * * 6862 2195 0 D 69 4976 * 2825 5630 6822 4968 * * 4466 * * 736 * 5329 4899 4728 6356 * * 6360 69 17 6396 * 2585 263 * * 6862 1000 0 S 70 6449 * 3087 6577 5295 660 * * 7032 6504 * 3720 6356 * 5512 4045 6301 * * * 70 132 3735 6317 2306 326 * * 6862 2997 0 V 71 4643 * 4623 3153 6315 6628 5746 4653 2876 5330 5791 4413 * 3428 3072 4186 4267 2804 * 4718 71 0 * * * * * 0 6842 0 1000 V 72 3824 7852 5438 4446 4801 * * 4628 2483 4160 5887 6557 2932 3962 2227 5066 4504 5279 * 6796 72 18 6323 * 2807 222 0 * 7022 1000 1000 I 73 4860 5847 * * 6445 * 5810 2302 * 1326 3457 * * 4101 * * 5182 3054 * 5654 73 85 6877 4369 1000 1000 * * 7045 1000 0 G 74 3515 * 6227 2694 6937 2977 * 4593 2644 5962 5282 6556 4200 4758 3559 4041 4726 3879 * 6270 74 116 6769 3875 2000 415 * 0 6909 1000 2907 K 75 3312 * 5866 5130 * 6809 5493 5818 2259 6163 8139 5469 2113 3422 2762 3837 6158 * * * 75 104 * 3843 * * 1677 541 6909 0 4222 D 76 5595 * 3565 3736 6238 1372 4710 6076 5537 * * 2439 * 4434 5195 4405 6491 * 6136 6067 76 75 6110 4786 1000 1000 684 1405 6900 1000 4651 Q 77 4487 * 3638 2488 6573 5075 4195 4190 2861 4394 * 4293 * 4200 4917 4041 3344 4474 * 5695 77 34 * 5421 * * 1589 583 6860 0 3647 E 78 7669 5338 6655 3486 7743 5004 6161 5584 3337 6591 4862 5170 2818 4658 3681 2693 3265 4789 4974 4539 78 31 5544 * 2000 415 674 1422 6897 1258 3467 V 79 3339 5365 * * 4764 5741 3329 3860 * 5483 * 6223 * 4296 3607 6431 4220 2020 * 2535 79 13 * 6843 * * 607 1541 6920 0 2089 K 80 4558 * 5051 2791 5002 * * 3788 3107 3538 7001 * 3150 4230 4413 4116 3339 3769 * 5235 80 18 6297 * 2322 322 0 * 7032 1000 1733 L 81 4948 * * * * * * 3543 * 321 * * * * * * * 3871 6252 * 81 0 * * * * * * 7042 0 0 Q 82 4437 * 5115 2840 6174 * 4222 * 2414 5076 * 3023 * 2930 3300 4268 4738 6743 5825 5138 82 0 * * * * * * 6960 0 0 P 83 4707 * 2316 3827 5026 * 2702 6227 6223 5998 * 2832 2711 5387 6130 4317 4434 4795 * * 83 0 * * * * * * 6939 0 0 G 84 * * 4887 5662 * 302 6032 * 5382 * * 4378 * 6659 * 4707 * * * * 84 0 * * * * * * 6939 0 0 Q 85 4290 6895 436 3834 * * * 6656 * * 6124 5237 * 4753 * 4963 6464 * * * 85 0 * * * * * * 6831 0 0 V 86 6703 5713 * 3359 * * 5020 3318 3296 3667 5179 5914 * 6676 2390 5360 2812 2730 * * 86 0 * * * * * * 6831 0 0 L 87 * * * * 3162 * * 1072 * 2032 * * * * * * * 2573 * * 87 0 * * * * * * 6831 0 0 H 88 3491 6056 5474 2836 * 6270 6820 * 3736 6131 * 5765 * 3612 2501 2265 3598 6121 * 4626 88 0 * * * * * * 6716 0 0 M 89 * * * * 3657 * * 1995 * 1022 4278 * * * * 6283 * 3147 * * 89 118 6246 3939 2000 415 * * 6695 1000 0 V 90 3157 5467 * * 5582 1549 * 3643 * 2012 5377 * * * 5467 * 5691 4290 * 4119 90 57 5721 5663 1585 585 * 0 6506 1000 2665 N 91 4263 * 2757 5544 3911 3934 5537 * 5618 3557 * 2717 3465 4780 3462 4659 * 4096 * 4267 91 27 * 5750 * * 660 1446 6446 0 2946 E 92 5718 * 2809 3177 5318 1931 * 6019 4460 4864 5613 3556 5586 4564 5469 4353 3975 4592 * * 92 59 4638 * 671 1426 * 0 6547 1615 2036 L 93 6485 * * 3610 5208 6667 4460 5024 1972 4016 4762 6513 * 2918 3605 2369 5550 * * * 93 94 3990 * 2513 278 1690 535 6459 2154 2036 Y 94 * * * * 1625 * 3086 3213 * 4708 * 4360 * * 5191 5274 * * * 1690 94 0 * * * * 0 * 6762 0 1645 P 95 * * 5577 4453 4866 5398 6202 2220 3491 5829 * * 2425 * 4161 * 2938 2977 5316 5976 95 49 4907 * 549 1661 * * 6839 1694 0 Y 96 * * * * 720 * 4828 * * 5618 5399 * * * * * * * * 1672 96 29 5633 * 1000 1000 * * 6839 1000 0 I 97 5373 * 5268 2326 5503 * 5723 5321 2300 4682 * * * 5510 2813 3561 3094 3714 * * 97 0 * * * * * * 6747 0 0 V 98 4449 * 4208 * 5394 * * 2179 * 2579 * * * * * 5511 5411 1485 * 3550 98 0 * * * * * * 6659 0 0 E 99 * 4905 3827 1012 * * 4063 4798 4799 * * 4376 * 3729 3343 * 4887 6281 * * 99 149 3345 * 1420 675 * * 5803 1679 0 F 100 * * * * 532 * * 2899 * 4461 * * * * * * * * * 2953 100 0 * * * * * * 5889 0 0 E 101 4175 * 4316 745 * 4195 * * * * * * * 3402 * 4094 3473 * * * 101 0 * * * * * * 5616 0 0 E 102 * * * 258 * * * * * * * * * 2611 * * * * * * 102 0 * * 0 * * * 3714 0 0 //