HHsearch 1.5 NAME c3izbO_ FAM FILE c3izbO_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3izbO_.a3m DATE Sat Dec 11 13:53:33 2010 LENG 121 match states, 121 columns in multiple alignment FILT 104 out of 117 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.9 EVD 0.3897 -1.2428 SEQ >ss_dssp CHHHHHHHHSCCTTHHHHHHHHHHHHSCCTTGGGSSSCHHHHHHHHHSSCCCCCSSSHHHHHHHHHHHHHHHHHHHHSCTTCTTTHHHHHHHHHHHHHHH HHHHSSSSSHHHHHHHTSSCC >sa_dssp EECEECDEECDEEDEBEEDBDECBEEECCDEDACEDDDDDCBDABECDDEEDECDCDDCDDBCDBBDCCDECCECCEDEEECEEDDEDBCECCEDBEEDB DECCEEDEEBEEBBEDBDDEE >ss_pred CHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH HHCCCCCCCCCCHHHHHHHHC >ss_conf 9589999999876998778768766640777411016517999999519788872899999999999999999427806778889999999999999998 706788997406899987629 >Consensus eeixxxIxxlakkGxxxsxIGxxLRDxxgvpxvkxvxgxxixxiLxxxgxxpxiPeDLxxLxkrixxLxxHLkxnkKDxxskRxLxxlxsrRxRLLkYlk rkxrlPxxWxyxxxxaxxlvx >c3izbO_ ESVIEQIVKYARKGLTPSQIGVLLRDAHGVTQARVITGNKIMRILKSNGLAPEIPEDLYYLIKKAVSVRKHLERNRKDKDAKFRLILIESRIHRLARYYR TVAVLPPNWKYESATASALVN >UniRef50_D2EG79(20-139:141) Ribosomal protein S15 n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EG79_9EURY E=1e-30 s/c=1.11 id=37% cov=100% EEVEQLILNKSQKGLTKSEIGTVLRDQYGIPSVKDLTKKSVSSILKSRGMTEPLPEDLIALYKKAVKLHMHVDKQKKDKHSIRSLVVLENRIKKLIKYYK QNKILPKDYTYSLESARLVV- >UniRef50_Q7VQM1(33-77:90) 30S ribosomal protein S15 n=2 Tax=Gammaproteobacteria RepID=RS15_BLOFL E=4e-07 s/c=1.23 id=22% cov=38% ------------------------------------------------------------LTQRINALKSHFNKHKQDHHSRRGLLHIVTRRRKLLKYLK KSSVL---------------- >UniRef50_B6KSY3(224-268:395) Ribosomal protein S15, putative n=3 Tax=Toxoplasma gondii RepID=B6KSY3_TOXGO E=0.001 s/c=0.98 id=37% cov=38% ---------------------------------------------------------LACLTEKILNVRAHLLRHFRDQQKKKVLSIWLSRRHRVMKYLY RV------------------- >UniRef50_Q9P9B8(32-150:151) 30S ribosomal protein S15 n=1 Tax=uncultured marine group II euryarchaeote 37F11 RepID=Q9P9B8_9EURY E=1e-35 s/c=1.25 id=33% cov=99% -EIESLILQYFKDGMSTAQIGTILRDKHAVPNVRLVLGKRIGAVLSENDESGTYPEDLMNLMRQAVAIIEHLTTNSRDLHNKRSLELTEAKIRRLGNYYK AEGRLDSDWRYKRDQLRLIV- >UniRef50_Q0CQF5(57-114:125) 30S ribosomal protein S15 n=2 Tax=Leotiomyceta RepID=Q0CQF5_ASPTN E=2e-13 s/c=1.32 id=32% cov=44% ---------------------------------------------------------------KILNLSRHLQTTNKDKHNKRNLRLLVHKRQKLLRYLR KKERGGPRWQYLVET------ >UniRef50_B7T420(7-70:120) Ribosomal protein S15 n=1 Tax=Monsonia vanderietiae RepID=B7T420_9ROSI E=2e-11 s/c=1.10 id=22% cov=54% ----------------------------------------ISAISQEKKNTGSIEFQLFSLDNKIQRISSHLKFHKNDYCARRCLQKLLANRERLRYYLV EKKR----------------- >UniRef50_A2BWS2(22-79:89) 30S ribosomal protein S15 n=25 Tax=cellular organisms RepID=RS15_PROM5 E=3e-07 s/c=0.96 id=22% cov=38% --------------------------------------------------------------ERITKLSEHLQGNIHDYASRQGLLKMIGKRKRLLSYIK GKD--PKNY------------ >UniRef50_Q54HG8(547-589:607) Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54HG8_DICDI E=0.0006 s/c=1.04 id=33% cov=30% -------------------------------------------------------------------LNAHLEKNKKDFVAKKRIPEVEKKRRSLVAYLK RT------------------- >UniRef50_Q18HQ4(31-153:158) 30S ribosomal protein S15P/S13e n=12 Tax=Halobacteriaceae RepID=RS15_HALWD E=2e-33 s/c=1.15 id=35% cov=99% DAIEERVVELAEQGHEPSQIGMKLRDEgvkgTPIPDVKLATDKKVTTILEEHNAKPELPEDLRNLMERAIRLRRHVDENGQDMQNKRALQNTESKIRRLA SYY-RGDELDEDFTYSFEVAVELL- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * E 1 * * 1070 1066 * * * * * * * * * 4446 * * * * * * 1 0 * * * * * * 3290 0 0 S 2 4353 * 2477 811 4628 * * * 4797 * * 7040 * 3500 * 5105 * * * * 2 0 * * * * * * 3357 0 0 V 3 * * * * * * * 891 * 3535 * * * * * 3682 * 1753 * * 3 0 * * * * * * 3412 0 0 I 4 * * * 972 * * * 3221 1804 * * 3911 * * * * * 5050 * * 4 0 * * * * * * 3412 0 0 E 5 4224 * 3220 1279 * * * * 2182 5241 * 4642 * 4578 * 3347 * * * * 5 0 * * * * * * 3561 0 0 Q 6 * * 3197 * * * * 2102 3742 2149 3914 5760 * 2431 4516 * 4509 * * * 6 0 * * * * * * 3561 0 0 I 7 * * * * * * * 512 * * * * * * * * * 1743 * * 7 0 * * * * * * 3561 0 0 V 8 3615 3396 * * * * * 2862 4850 2081 3867 * * * * * * 2115 * 3114 8 0 * * * * * * 3561 0 0 K 9 * * 3093 3182 * * * * 1215 * * 2999 * 3347 * 3743 4509 * * * 9 0 * * * * * * 3561 0 0 Y 10 5345 * * * * * * * 4578 833 2447 * * * * 5760 * * * 2553 10 0 * * * * * * 3561 0 0 A 11 911 * * * 4549 4170 4509 * * * * 3419 * * 3817 3077 6581 * * 4945 11 0 * * * * * * 3561 0 0 R 12 4644 * * 3512 * * * * 744 * * 4170 * 4578 3007 * 4224 * * * 12 73 4350 * 0 * * * 3561 1000 0 K 13 * * 3134 3897 * * * * 993 * * 4350 * 2160 4509 * * * * * 13 0 * * * * * * 3561 0 0 G 14 * * * * * 135 * * * * * 3490 * * * * * * * * 14 114 * 3720 * * * * 3561 0 0 L 15 4492 * * * * * 4429 * * 1673 2522 4860 * 5217 * * * 2684 * 2290 15 0 * * * * * 0 3488 0 1126 T 16 * * * 4429 * 4993 * * * * 5217 * 2718 * * 1477 1526 4762 * * 16 0 * * * * * 0 3488 0 1126 P 17 4111 * * * * * * * 3424 * * 4385 853 3654 * 4167 3151 * * * 17 0 * * * * * 0 3488 0 1126 S 18 1577 * * * * * * * * * * * 3851 * * 748 * * * * 18 0 * * * * 0 * 3488 0 1126 Q 19 * * 4170 3390 * * * * 3617 4103 2207 * * 1211 4563 * 5760 * * * 19 0 * * * * * * 3561 0 0 I 20 * * * * * * * 0 * * * * * * * * * * * * 20 0 * * * * * * 3561 0 0 G 21 * * * * * 0 * * * * * * * * * * * * * * 21 0 * * * * * * 3561 0 0 V 22 * * * 3160 * * * 2778 * 2306 4516 4224 * * * 4870 2516 2097 * * 22 0 * * * * * * 3561 0 0 L 23 3720 * * * * * * 1921 2341 4056 * 4563 * * 3362 * 4509 2436 * 4870 23 62 * 4563 * * * * 3561 0 0 L 24 * * * * * * * * * 0 * * * * * * * * * * 24 0 * * * * * 0 3393 0 1000 R 25 * * * * * * * * 4134 * * * * * 85 * * * * * 25 0 * * * * * 0 3393 0 1000 D 26 * * 210 * * * * * 4134 * * * * * * * * 3670 * * 26 0 * * * * * 0 3393 0 1000 A 27 5149 * * 2028 * * * * 3629 * * 4861 * 1548 4805 2528 * 4053 * * 27 71 4388 * 2000 415 * 0 3376 1000 1000 H 28 4812 * * * 4919 * 1320 * 4377 * * * * * * * 4388 * * 1201 28 0 * * * * * 0 3376 0 1000 G 29 3001 * * * * 559 * * 4138 4377 * * 4388 * * 4519 * * * * 29 0 * * * * * 0 3376 0 1000 V 30 * * * * * * * 1124 * * * * * * * * * 886 * * 30 0 * * * * * 0 3376 0 1000 T 31 2538 * * * * 3068 * * * 4138 * * 797 * * * 5149 4377 * * 31 0 * * * * * 0 3376 0 1000 Q 32 * * 1718 * * 4410 * * 4083 2607 * 3617 * 2319 * 3518 * * * 4138 32 39 * 5247 * * * 0 3376 0 1000 A 33 3478 4025 * * * * * 3579 * 4644 * * 4106 * * * 3346 814 * * 33 0 * * * * 648 1467 3371 0 1081 R 34 * * * * * * * * 1054 * * * * * 1362 3461 4704 * * * 34 0 * * * * * 0 3414 0 1000 V 35 4902 * 2817 * 3328 * * * * 2070 * 3625 3025 3027 * 3800 4065 5121 * * 35 0 * * * * * 0 3414 0 1000 I 36 3581 * * 4146 * * * 1806 * 3550 4927 * * * * * * 1266 * 4639 36 89 4065 * 0 * * 0 3414 1000 1000 T 37 4928 * * * * * * 4639 * 1869 * 4065 5045 * * 4375 957 * * * 37 0 * * * * * 0 3414 0 1000 G 38 * 6229 4392 * * 454 3716 * 3338 * * 4866 * * * * * * * * 38 0 * * * * * 0 3414 0 1000 N 39 * * * 4146 * * * * 1228 3424 3411 2962 5045 * 3335 3800 * * * * 39 0 * * * * * 0 3414 0 1000 K 40 * * * 5045 * * * * 1153 * * 3625 * * 3676 1658 4513 * * * 40 0 * * * * * 0 3414 0 1000 I 41 * * * * * * * 778 * 1955 * * * * * * * 2655 * * 41 0 * * * * * 0 3570 0 1000 M 42 * * * * * 2431 * * * 3530 5213 * * 3267 * 1702 2444 5080 3710 * 42 0 * * * * * 0 3570 0 1000 R 43 3370 * 4730 2434 * * * * 2789 * * * * 3749 1596 3483 4599 * * * 43 0 * * * * * 0 3570 0 1000 I 44 * * * * 2951 * * 703 * * * * * * * * * 2565 * 3520 44 43 5084 * 2322 322 * 0 3570 1000 1000 L 45 * * * * * * * * * 131 * * * * * 4119 * 5084 * * 45 0 * * * * * 0 3570 0 1000 K 46 * * * 1746 * * * * 1395 * * * * 3170 3104 4673 * 4184 * * 46 0 * * * * * 0 3570 0 1000 S 47 4755 * 4714 1167 * 5013 * * 2789 4393 * * * * 3590 2529 * * * * 47 0 * * * * * 0 3570 0 1000 N 48 * * * 4115 * * 2881 * 1898 * * 1617 * 5013 3047 4052 * * * * 48 0 * * * * * 0 3570 0 1000 G 49 * * 3619 5005 * 702 * * 3133 * * 2656 * * * * * * * * 49 0 * * * * * 0 3578 0 1000 L 50 2750 * * 4657 * * * 4116 * 1072 3128 3170 * * * * * 4242 * * 50 41 5146 * 3000 193 * 0 3517 1000 1000 A 51 2030 * * 3694 4133 6309 * * 2501 3746 * 5035 * * 5146 3427 3229 3342 * * 51 0 * * * * * 0 3517 0 1000 P 52 4580 * * 4250 * 2765 * 3587 * * 4990 * 820 * * 3694 * * * * 52 0 * * * * * 0 3517 0 1000 E 53 * * 2306 1553 * * * * 3475 4449 * * 4250 4229 * 3571 3327 4990 * * 53 0 * * * * * 0 3517 0 1000 I 54 * * * * * * * 1001 * 2052 4517 * * * * * * 2774 * 3855 54 0 * * * * * 0 3759 0 1000 P 55 * * * 2998 * * * * * * * * 193 * * * * * * * 55 0 * * * * * 0 3759 0 1000 E 56 * * 5248 377 3798 * 4457 * * * * * * * * * * * 4662 4415 56 0 * * * * * 0 3759 0 1000 D 57 * * 193 * * * * * * * * * * 2998 * * * * * * 57 0 * * * * * 0 3759 0 1000 L 58 * * * * * * * * * 249 4408 * * * * * * 3169 * * 58 0 * * * * * 0 3823 0 1000 Y 59 4561 * * 3475 2705 * * 3458 4207 * 2600 * * 4446 4094 5365 5109 4131 * 2399 59 0 * * * * * 0 3823 0 1000 Y 60 3168 2940 3379 * 5087 * 2764 * * * 6933 2276 * * 5362 2675 * * * 3472 60 0 * * * * * 0 3805 0 1000 L 61 * * * * * * * 4628 * 60 * * * * * * * * * * 61 50 * 4869 * * * 0 4252 0 1000 I 62 * * 4805 * * * * 2487 * 5107 2891 * * * * 3267 1415 3121 * 5146 62 0 * * * * 715 1355 4224 0 1171 K 63 * * * 1438 * * 5138 * 1464 * * 4364 * 3669 3993 4320 * * * * 63 0 * * * * 0 * 4273 0 1000 K 64 * * * * * * * * 1256 * * * * 3475 1025 * * * * * 64 0 * * * * * * 4487 0 0 A 65 1332 * * * * * * 1200 * 4226 * * * 4915 * * * 4543 * 4717 65 0 * * * * * * 4487 0 0 V 66 5610 * * 5201 * * * 4686 2871 2488 * 2262 * 5188 3411 * 5320 2184 * 5409 66 0 * * * * * * 4500 0 0 S 67 3084 * * 6490 6428 3915 5297 4705 2475 * * 2022 * 4986 2504 4179 5454 * * 5855 67 0 * * * * * * 4686 0 0 V 68 5011 * * * 5145 * * 2662 3724 659 * * * * * * * 3765 * * 68 0 * * * * * * 4677 0 0 R 69 7004 * * 4382 * * 4708 6041 3645 6062 5030 4060 * 3534 2080 3235 2045 * 5880 5878 69 8 * 7573 * * * * 4681 0 0 K 70 3412 * 4477 1929 * 6633 * * 2399 * 4824 5862 * 5562 2866 2675 5612 * * 6529 70 0 * * * * * 0 4687 0 1000 H 71 * * * * * * 108 * 4431 * * * * * 5264 * * * * * 71 0 * * * * 0 * 4606 0 1000 L 72 6747 4955 * * 3605 * * 3005 3791 824 3768 * * * * * * 4601 * * 72 0 * * * * * * 4600 0 0 E 73 4613 * 3967 2945 * * 5642 4228 1452 4617 * 3720 * 3413 5527 4237 5117 6331 * * 73 0 * * * * * * 4602 0 0 R 74 5611 * 4713 2943 5409 5245 6282 3940 2607 3657 5970 3029 * 4255 3020 6597 3885 4610 * 7197 74 11 7030 * 4000 93 * * 4602 1000 0 N 75 * * * * 4615 6665 1368 * * * * 1222 * 6096 3878 6861 6866 6634 * 5407 75 0 * * * * * * 4597 0 0 R 76 6968 6138 * * 5784 5682 5610 6964 1100 * * 5370 2682 6883 2187 6296 5361 * * * 76 6 7818 * 1000 1000 * * 4597 1000 0 K 77 * * 4437 * * 5507 3301 * 737 * * 3933 * 5447 2815 * * * * * 77 0 * * * * * * 4592 0 0 D 78 * * 68 * * * * * 4437 * * * * * * * * * * * 78 0 * * * * * * 4592 0 0 K 79 * * * * 3232 * 3498 5039 2013 3718 4264 3200 * 4763 5507 6239 4745 5012 * 2741 79 0 * * * * * * 4592 0 0 D 80 2711 4756 3628 * * 5677 1779 * * 6218 * 3822 * 3840 5507 2634 5737 3996 * * 80 0 * * * * * * 4592 0 0 A 81 3037 4194 * * * 4967 * * 3674 * * 1922 * * 6206 1543 3901 5283 * * 81 0 * * * * * * 4592 0 0 K 82 * * * 5314 * * * 6115 1178 5691 6482 6320 * 3912 1822 4177 4762 4877 * * 82 0 * * * * * * 4592 0 0 F 83 * * * * 3628 * 7094 5515 4187 5126 * * * 5551 506 5283 6320 7318 * 4785 83 68 * 4437 * * * * 4592 0 0 R 84 3976 5391 * * * 1284 5692 * 4265 6191 5715 4460 * 5235 2606 3410 6003 5712 5633 6284 84 0 * * * * 0 * 4501 0 1000 L 85 5403 * * * * * * 5004 * 220 3773 * * * * * * * * 6196 85 0 * * * * * * 4592 0 0 I 86 6201 * 6631 4601 6353 4887 * 2606 5059 2415 4874 5706 5921 2789 2812 3651 5435 5286 6145 6974 86 0 * * * * * * 4594 0 0 L 87 3847 * 5480 5402 * 7233 5323 3567 2190 1946 3828 6221 3797 * 4770 6352 7062 4432 * 4996 87 0 * * * * * * 4594 0 0 I 88 4823 6353 * * * * * 1833 6057 1518 2952 * * * * * 4070 3608 5790 5736 88 0 * * * * * * 4594 0 0 E 89 6656 7278 * 1885 * 5156 * 3135 * 2600 5402 6981 * * * 5849 4550 1716 * 6631 89 0 * * * * * * 4594 0 0 S 90 3229 6520 4505 5620 * 2410 3421 6314 5921 * * 4219 * 4940 * 1416 6704 5498 * 6091 90 0 * * * * * * 4594 0 0 R 91 6352 * * 5443 * * 5706 * 1460 * * 5413 * 2870 1278 * 6727 * * * 91 0 * * * * * * 4594 0 0 I 92 * * * * * * * 2011 * 4887 4608 * * * 635 * * 4910 * * 92 0 * * * * * * 4594 0 0 H 93 4641 * * 5413 * * 2328 * 2266 5402 * 4887 * 3534 1657 5907 * * 6022 4776 93 108 * 3797 * * * * 4594 0 0 R 94 5722 * * * * 6105 * * 1636 6149 * 5605 * * 823 4469 * * * * 94 0 * * * * * 0 4452 0 1126 L 95 * 4856 * * * * 5008 4086 * 387 4541 * * * * * * 4105 * 6709 95 0 * * * * 0 * 4452 0 1126 A 96 3432 * * * * 6314 * 3798 * 719 3905 * * 6684 5413 4416 6022 4228 * * 96 0 * * * * * * 4594 0 0 R 97 4371 * 3821 6382 * * * 7035 1494 * * 3692 * 4676 1932 3972 7301 4869 * 5413 97 0 * * * * * * 4594 0 0 Y 98 * * * * 5621 * 4879 * * * * 5862 * * * * * * * 107 98 0 * * * * * * 4581 0 0 Y 99 * 5809 * * * * * 5203 * 984 4276 * * * * * * 5614 6144 1461 99 23 * 6004 * * * * 4534 0 0 R 100 5154 * * 4564 * 6149 6378 5666 944 * 5730 5616 * 5882 2316 6672 * 4420 * 4305 100 0 * * * * 0 * 4507 0 1000 T 101 4440 * * 5111 * 6090 * 3826 1967 6461 * 7072 * 5163 1028 5910 5042 * * * 101 0 * * * * * * 4549 0 0 V 102 6458 * * 4647 * 5788 * 4328 1127 6446 * 5104 * * 4418 4240 2431 3362 * * 102 0 * * * * * * 4547 0 0 A 103 6508 * 2476 4033 5226 2334 * * 2771 4516 5295 4241 * 6487 3140 3576 5757 * 5180 * 103 102 * 3877 * * * * 4367 0 0 V 104 * * * 5065 * * * 4864 3261 * * * 5053 * 839 * * 2046 * * 104 0 * * * * * 0 4283 0 1790 L 105 * * * * * 3374 * 2948 * 620 4082 4944 * * * * * 4976 * * 105 0 * * * * 0 * 3978 0 1790 P 106 5422 * 3788 * * 4008 * * * * * * 324 * * 4536 * * * * 106 0 * * * * * * 3950 0 0 P 107 4144 * * 2578 * 4105 * 5740 2461 * * * 1905 3845 5377 3205 4371 * * * 107 0 * * * * * * 3937 0 0 N 108 * * 1853 * * 4133 * * * * * 1559 * * 3129 4898 2636 5791 * * 108 0 * * * * * * 3937 0 0 W 109 * * * * 4565 * * * * * * * * * * * * * 325 2646 109 0 * * * * * * 3937 0 0 K 110 * * * 4423 * * 5196 * 1273 * * 3360 * 3379 3094 4320 3027 5114 * * 110 0 * * * * * * 3730 0 0 Y 111 * * * * 4111 * 3907 * * 3447 * * 4204 * * * * * * 455 111 0 * * * * * * 3585 0 0 E 112 * * 2713 2408 * * * 4405 2433 4109 3704 4435 * * 4966 2486 4823 * * * 112 0 * * * * * * 3514 0 0 S 113 * * * * 4185 * * 4333 * 2095 * * 2262 * 4375 1762 * 4011 * 4385 113 0 * * * * * * 3456 0 0 A 114 4027 * 4317 1388 * * * * 3000 * * 5142 * 3815 * 2817 5467 3090 * * 114 0 * * * * * * 3389 0 0 T 115 * * * 2671 * * * 4264 3850 * * * * 3513 * 3943 1121 3194 * * 115 0 * * * * * * 3388 0 0 A 116 95 * * * * * * * * 3976 * * * * * * * * * * 116 0 * * * * * * 2973 0 0 S 117 4341 * * 1754 * * * * 3483 * * * * 3945 2337 2086 * 3914 * * 117 0 * * * * * * 2973 0 0 A 118 3034 * * 3914 * * * 2560 * 920 * * * * * * 3140 * * * 118 0 * * * * * * 2973 0 0 L 119 * * * * * * * 3713 * 422 * * * 3408 * * * 3589 * * 119 0 * * * * * * 2874 0 0 V 120 * * * * * * * 2118 * 2799 * * * * * * * 676 * * 120 0 * * * * * * 2853 0 0 N 121 * * * * * * * * * * * 2169 * * * 765 2400 * * * 121 0 * * 0 * * * 2124 0 0 //