HHsearch 1.5 NAME c3i38I_ FAM FILE c3i38I_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3i38I_.a3m DATE Sun Aug 29 02:44:38 2010 LENG 96 match states, 96 columns in multiple alignment FILT 103 out of 828 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.3 EVD 0.4311 0.2769 SEQ >ss_dssp CCCEEETTEEEEEEEECHHHHHHCEEEEECCCCCEEEEECTTCCTTCEEEESSCCCCCCEEEEEEECCCSCCCHHHHHHHHHHHHHTTTCCTTCCC >sa_dssp EEDEEDEECBCBEBDACCEDBEECCECEADCEDDCEBEADEEBEEDCDBEBEEDCEEBCABACBEDDEDEEDEEEDDDDDEEEEEEEEEEEDEEEE >ss_pred CCEEEECCCEEEEEECCHHHHCCCCEEEEECCCCEEEEECCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC >ss_conf 935895793899975198897047459997489779996797548868994698788607999999869999889999999999852589842379 >Consensus PxfxrxGxDLxxxxxislxeAlxGxxxxixxxdgxxixipxxxxxgxxxxixgxGxpGDLxvxxxvxxPxxlsxxxkxllxxlxxxxxxxxxxxxw >c3i38I_ PLFDIVGHNLEIVLPLAPWEAALGAKVTVPTKESILLTVPPGSQAGQRLRIKGKGLTGDLFAVIKIVXPTKPDEKARELWQQLAAAEASFDPRKTW >UniRef50_B8C0D1(272-346:347) Dnaj-like protein subfamily B member 1-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8C0D1_THAPS E=2e-06 s/c=0.72 id=26% cov=60% PFLQHRGNDLYWKCKLTSRQAEKGAKLRLPLPDGSTLEVssKKDTTSGEQMRVSGRGMP--------------------------------------- >UniRef50_A0BK64(324-414:416) Chromosome undetermined scaffold_111, whole genome shotgun sequence n=3 Tax=Paramecium tetraurelia RepID=A0BK64_PARTE E=3e-11 s/c=0.76 id=25% cov=84% ---RRDGNNIISELELSVSEMVLGCKKQIQTIwGALEISIPGAQQPRTKLQIPQYGIqygqsqwkKGDHIVILNLEIPQQVNERTKQLYYEL-------- ----- >UniRef50_B3PMD7(265-365:369) Chaperone protein dnaJ n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PMD7_MYCA5 E=2e-08 s/c=0.59 id=18% cov=98% -YYERINDDIVLTVPVSIKSILLEEEIEIPTPYGRtKIKLKKDTKLDAVIKLSNYGFsilnskkRGDLVVVLKPYIP-SLDKEASEEL-KIIFAKNEDNQ YKKW >UniRef50_UPI0001854D3E(68-154:177) putative co-chaperone with DnaK n=1 Tax=Helicobacter pylori HPKX_438_CA4C1 RepID=UPI0001854D3E E=4e-05 s/c=0.57 id=24% cov=85% --FAPENLDMTATLNVSVLDTLLGNKKQVSVnNETFSLKIPIGVEEGEKIRVRNKGkmgqtGRGDLLLQIHIEEDEIYRREKDDIIQTF----------- -- >UniRef50_C9M8U6(253-358:391) Chaperone protein dnaJ n=2 Tax=Synergistaceae RepID=C9M8U6_9BACT E=9e-15 s/c=0.77 id=24% cov=100% PRFTRDGDELHCAARVSYPDAVFGTTLKVETlIDGLaDVKIPAGTGPGSVVRLKGLGMPrlrsfgrGDLYVHVELEVPagRELSAQAQEALKAFRQAISP DGPSEQ- >UniRef50_C5LNN4(277-389:408) Chaperone protein DNAJ, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LNN4_9ALVE E=7e-13 s/c=0.67 id=24% cov=98% --FRRVDEDVHLTVPVTLSQALLGGTVEIPSltseKDIIRLQIPPNTLPGNSRIIRGKGPPklsagsstdsssnprGNLVLHFSLSLPERLTPRQEALIR EFDDIERESKEKRS- >UniRef50_B9FPQ5(285-392:401) Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9FPQ5_ORYSJ E=9e-09 s/c=0.57 id=13% cov=95% -VFKRKGNDLVLKAEVPLVSALTGWSFSFRLIGGEKMSFtfrDEVISPGYEKVVAGEGMPvvaaggggekaaagrGEIRVKFEVVFPKNLTGEQGAGLAR ILRACPGSN----- >UniRef50_C4V8M8(261-359:407) Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4V8M8_NOSCE E=9e-05 s/c=0.48 id=20% cov=79% PRFRKSGYNLISKVDIPLYVALAGGQIIFEHITGKKFEItlypfkdlkKCIILKGEGFKIKNSYSGGDLILEPNIIIDKNIDKD---------------- ----- >UniRef50_A2FFJ7(249-337:413) DnaJ domain containing protein n=2 Tax=Trichomonas vaginalis RepID=A2FFJ7_TRIVA E=9e-05 s/c=0.54 id=22% cov=81% --WARDGDDLYYLKNLSIYEQKHGTAFTIHHLDGRELEVytQPEVPPDlsRIKWIPNEGMPcrgnvqfkGNLYIYFEKGFPEPIHEGIRTL--------- -------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * P 1 * * * * * * * * * * * * 0 * * * * * * * 1 0 * * * * * * 5074 0 0 L 2 * * * 4831 4243 * 3810 2936 6045 3244 5250 4910 6136 * 3356 5827 4348 2271 5855 2980 2 0 * * * * * * 5934 0 0 F 3 * * * * 610 * * 6526 * 6078 * * * * * * * * 3602 2078 3 0 * * * * * * 6232 0 0 D 4 3992 * 4403 3140 * * 4904 * 3046 6309 * * * 4982 2167 3511 2214 4271 * * 4 12 6892 * 0 * * * 6278 1000 0 I 5 6280 6523 * * * * 6356 4181 4834 3335 * * 5845 * 559 * * 3668 * * 5 17 6413 * 1000 1000 * * 6309 1000 0 V 6 5581 * 1896 3256 6529 * 5611 5323 2560 5366 6875 4444 * 4554 2982 3858 5939 4421 * * 6 23 6014 * 0 * * * 6389 1000 0 G 7 6493 * 4305 4813 * 325 * * 6389 * * 3634 * * * 6354 * * * * 7 52 4808 * 1133 878 * * 6389 2214 0 H 8 3330 * 2431 4656 5333 * 4598 * 6008 3097 6273 2603 * 4213 3625 3595 6679 5971 * 4157 8 34 6745 6187 0 * * * 6371 1000 0 N 9 * * 496 6872 * * 4484 * * * * 2414 * * 5283 5369 * * * * 9 0 * * * * 0 * 6372 0 1000 L 10 4805 * * * * * * 2251 6638 771 6497 * * * * * * 2764 * * 10 0 * * * * * * 6483 0 0 E 11 6350 * * 3684 4597 * 2438 3118 4331 3480 7086 6690 * 5431 5465 6534 4531 3101 * 2350 11 0 * * * * * * 6483 0 0 I 12 3443 3667 6440 * 5199 * 6556 4281 7067 4059 3655 * * 4612 4986 2891 2507 3718 6315 3186 12 0 * * * * * * 6483 0 0 V 13 6886 * 3395 2602 6560 * 5921 5536 3204 5348 7033 3146 * 5510 3709 3873 2374 4117 6350 * 13 14 6678 * 0 * * * 6483 1000 0 L 14 3905 5117 * 4047 * * 6898 3172 3684 1667 5036 * 5959 5617 6980 * 6345 2218 * 5075 14 0 * * * * * * 6483 0 0 P 15 4268 * 2886 3250 6128 * 5038 6651 3292 5581 * 3539 2333 6619 4055 5768 3092 5724 * 5603 15 0 * * * * * * 6483 0 0 L 16 * * * * * * * 1404 * 1941 * * * * * * * 1467 * * 16 0 * * * * * * 6483 0 0 A 17 6914 6481 3153 6350 4500 5486 * * * * * 4251 2808 * 6295 1352 2551 6489 * 7011 17 0 * * * * * * 6483 0 0 P 18 5423 6922 * * 2946 * * 2982 * 1300 5957 * 3134 * * 6489 * 3524 * 3684 18 0 * * * * * * 6483 0 0 W 19 4105 * 5151 3095 6641 5776 6315 4445 3279 3788 7215 6992 4267 4154 3558 4183 3789 3759 3984 3999 19 0 * * * * * * 6483 0 0 E 20 6556 * 2040 1574 * 6629 5826 * 4680 5483 * 6247 * 2845 6641 4468 3854 4487 * * 20 16 6534 * 1000 1000 * * 6483 1000 0 A 21 561 5714 * * 5439 * * 4077 * 4238 5087 * * 6210 * 3873 6497 4982 * 6159 21 19 6235 * 0 * * * 6483 1000 0 A 22 3308 * * * 4673 * * 2603 6210 1170 4931 * * * 5355 * * 2943 6482 4689 22 0 * * * * * * 6483 0 0 L 23 4856 3316 6295 5383 3369 6235 5454 6560 4995 1376 6638 3928 * * 5291 6357 3611 3992 * 6629 23 0 * * * * * * 6483 0 0 G 24 * * 6357 4639 * 191 * * 5693 * * 6235 6534 6107 * * * 6159 * * 24 0 * * * * * * 6483 0 0 A 25 3378 3001 4912 5329 3136 1843 * 5489 5742 5575 * 4135 * 5555 * 5057 3386 6481 4859 5887 25 10 7115 * 0 * * * 6483 1000 0 K 26 4188 * 4575 3030 6274 * 5860 5422 2403 * * 4470 5801 3790 4965 2943 2210 6350 * 6330 26 11 7028 * 1000 1000 * * 6483 1000 0 V 27 4309 * * 5770 3485 * * 1800 3420 4266 6654 * * 6589 3276 * 5146 2129 * 5112 27 15 6598 * 0 * * * 6483 1000 0 T 28 6761 * 4307 2407 5569 * * 4057 3551 6522 7115 3853 3936 4367 3364 4637 2393 4423 6678 * 28 0 * * * * * * 6483 0 0 V 29 6128 * * * 3403 * * 1535 * 2975 * * * * 6651 * 6350 1377 * 6440 29 73 4349 * 1301 751 * * 6483 3067 0 P 30 4807 * 3521 3473 * * 5348 5287 2995 6992 6693 5702 1920 4715 3596 4106 3260 6345 * 6064 30 63 4556 * 706 1370 * * 6483 2543 0 T 31 5031 * 5607 6589 5679 3254 3209 6818 5356 2918 6581 4040 6598 6001 * 4279 1500 4711 * * 31 97 3938 * 855 1162 * * 6483 3362 0 K 32 7026 * 6489 5770 5061 4649 * 2074 4392 1802 4959 4998 2761 6598 5773 6357 5242 5567 * 5523 32 128 3561 * 1268 774 * * 6483 3823 0 E 33 4898 6064 1298 3211 6527 2784 6500 * 4740 * * 4057 * 5310 6581 4333 4212 * * 4921 33 23 6003 * 545 1668 * * 6483 1601 0 S 34 6571 * 4109 4343 6545 670 * 6766 3898 * 6330 6159 6876 6818 * 4317 3782 * * * 34 358 2186 * 738 1320 * * 6483 4850 0 I 35 4922 * * 4620 5154 * * 2764 3202 3195 5758 6815 * 4818 2383 5530 3156 2787 * * 35 106 3819 * 165 3211 * * 6483 3415 0 L 36 5314 * 4378 2707 5334 6222 7086 5518 2513 4639 6761 4433 5101 3910 3420 4104 2655 6545 * 5742 36 104 3847 * 214 2858 * * 6483 3358 0 L 37 * * * * 4365 * 6629 1794 * 1357 4531 * * * * * 5833 2418 * 6082 37 45 5578 6641 1736 515 * * 6483 1708 0 T 38 5293 * 5007 2816 * * 5865 7089 2194 5758 * 4043 4655 4004 3220 3297 3149 5630 * 4830 38 51 4845 * 687 1400 0 * 6477 2162 1000 V 39 * * * * 5413 * * 1348 * 2583 5525 * * * * * * 1399 5959 * 39 173 3261 6792 1784 495 * * 6483 3646 0 P 40 6206 * 4207 4880 * * * * 3048 * * 5217 827 4579 5319 4065 5623 5305 * 6097 40 162 3393 6524 1021 979 * 0 6481 3639 1000 P 41 2865 5149 3525 3361 6486 5018 * 5049 2922 4866 * 5504 1937 4558 6602 4636 5353 6476 * * 41 67 4472 * 1286 761 0 * 6468 2608 1568 G 42 5938 5642 5018 4883 * 1202 6330 4078 5828 7018 * 2791 5502 6501 * 4755 5007 3415 6247 6107 42 153 3312 * 1074 930 * * 6483 3687 0 S 43 4091 6489 * 6159 6450 * * 3153 6482 4223 4612 * * 6571 * 2486 1776 2575 * 4725 43 0 * * * * * * 6483 0 0 Q 44 6629 6619 6641 4287 6560 4732 4381 6638 2505 4014 * 4832 4211 1957 3591 3468 6481 4879 * 6792 44 14 6660 * 1585 585 * * 6483 1000 0 A 45 4738 * 3476 4478 5002 * 4386 5369 6068 6765 * 3360 1608 5530 5927 2881 3947 6485 * 5314 45 51 5251 6917 1317 740 * * 6483 1686 0 G 46 6866 * 3390 4866 6786 660 7147 6538 5601 5369 * 4792 6444 6496 4418 5686 4947 * * * 46 20 6204 * 1000 1000 * 0 6481 1000 1000 Q 47 5193 6886 3046 2829 6311 5036 5202 * 3055 5540 7029 6762 * 2635 3487 4466 3059 5763 * 4654 47 64 4531 * 1922 442 * 0 6481 2523 1000 R 48 6955 6495 4890 3076 5929 4592 * 3589 2661 5765 * 7331 5890 3721 3902 4439 3722 2216 * 6911 48 0 * * * * 0 * 6481 0 1000 L 49 * * 5797 6235 3158 * * 2162 3238 1906 4274 5959 * 6315 3700 * * 3888 * 4810 49 0 * * * * * * 6483 0 0 R 50 6559 4475 * 6680 * 5927 6845 3645 3139 * * 4915 6659 6571 1352 4441 3551 2990 6210 * 50 29 5663 * 2180 360 * * 6483 1567 0 I 51 * 6559 * * 3980 * * 1551 * 1667 5375 * 6500 * * * * 2312 * 4912 51 28 5709 * 3762 110 * * 6483 1624 0 K 52 3367 * * 3480 * 5478 * * 1679 5282 * 4792 2624 4680 3438 3865 5178 5199 * * 52 0 * * * * * * 6483 0 0 G 53 6556 * 5930 5228 * 653 6902 * 4596 6502 * 2477 * 5776 6107 5592 * * * 5927 53 0 * * * * * * 6483 0 0 K 54 3825 5959 * 2546 * * 5361 * 1811 4067 4951 5927 5068 3058 3543 5200 * * * 4022 54 112 3741 * 2657 249 * * 6483 3101 0 G 55 * * 6064 5927 * 68 * * * * * * * * * * * * * 6068 55 88 4077 * 3000 193 * * 6483 3156 0 L 56 4026 * * 4878 3397 4287 6215 2887 5497 2507 2073 5339 6785 * 6655 5312 * 3248 * * 56 261 2593 * 2798 224 * * 6393 4464 0 T 57 4374 * 6215 5283 * 6029 6604 * 2978 * * 4986 1088 6840 2248 5037 6899 * * * 57 1366 742 6143 2916 205 * * 6393 5975 0 G 58 * * * * * 41 * * * * * * * * * 5148 * * * * 58 0 * * * * 0 * 6274 0 1000 D 59 6683 * 524 5552 * 6215 6872 * * * * 2503 * 6955 6287 5091 5325 * * * 59 20 6215 * 0 * * * 6393 1000 0 L 60 4712 * * * 4912 * 3663 6621 * 588 4304 * * 4081 * * * 4223 * 6511 60 0 * * * * * * 6393 0 0 F 61 * 6705 6215 6664 3894 * 4880 1777 4173 4272 6143 * * * 4364 * * 2809 * 1935 61 0 * * * * * * 6393 0 0 A 62 4737 * * * 4650 6744 * 1931 * 2530 * * * * * * 6246 1105 * * 62 0 * * * * * * 6393 0 0 V 63 5474 * 6966 2522 6629 6916 3105 4571 3300 4792 * 6469 * 3534 3417 * 2510 3484 * 5330 63 0 * * * * * * 6393 0 0 I 64 5869 * * * 1925 * * 2529 * 1973 * * 5306 * * * 5183 2354 5629 5441 64 0 * * * * * * 6393 0 0 K 65 5711 * 4031 3376 5700 6066 3908 5505 2894 6547 * 2156 * 3430 3928 4014 5506 4110 * 5025 65 0 * * * * * * 6393 0 0 I 66 6468 * * * 5251 * * 1925 6233 3167 * * 5892 * * * 5746 1029 * 4349 66 19 6232 * 1585 585 * * 6393 1000 0 V 67 4078 * 3477 2806 * 6057 6683 3468 2725 5683 5157 5333 * 4262 3252 5776 5203 3048 6744 4774 67 34 6736 6202 2000 415 * * 6471 1000 0 X 68 6233 * * 4564 2103 * * 2493 6141 2727 4220 6859 6488 * 5900 6041 4027 2769 6368 4529 68 0 * * * * * 0 6434 0 1000 P 69 6066 * 4235 5916 * * * * * 6532 6436 * 216 * * 6137 * * 5793 * 69 62 5751 5428 1000 1000 0 * 6436 1584 1000 T 70 4919 * 3426 2698 6838 5400 6358 6450 1910 * 5315 5246 4895 4356 3982 5366 2927 4482 * * 70 86 4546 6052 629 1501 1000 1000 6426 2479 1647 K 71 4021 * 4474 3912 5056 6108 7093 3559 2177 5700 * 2747 5190 6200 4228 2997 4549 6186 * 5326 71 18 6358 * 1000 1000 0 * 6404 1000 1738 P 72 4732 * 6522 6465 5090 6613 * 3259 * 789 * * 4094 * 6365 5315 5442 3869 6406 5762 72 0 * * * * * * 6424 0 0 D 73 * 6463 2854 5187 * 5553 5959 6018 4460 * * 3432 6893 6472 4159 1668 2111 * 6613 * 73 14 * 6652 * * * * 6424 0 0 E 74 3613 * 2273 2776 * 4117 6743 * 2864 6468 6432 5140 2892 5308 5737 3658 4907 5759 * * 74 26 6731 6880 2000 415 * 0 6422 1000 1000 K 75 2952 * 3306 1967 * 5937 6211 * 2510 6339 * 5531 6381 3824 3265 4749 4301 * * * 75 23 5994 * 0 * * 0 6418 1000 1542 A 76 4129 * 6300 2527 6375 * 6304 4702 4361 3568 6176 * 6127 1476 * 4319 3979 5027 * 5124 76 39 5215 * 0 * 964 1037 6349 1687 1542 R 77 4286 * 5032 5355 * 5332 * 3839 1391 3690 * 6086 * 4261 2361 6551 4508 5372 * * 77 36 6154 6566 0 * * 0 6364 1000 1000 E 78 2778 * 3192 1970 * 6574 5269 6469 2969 5541 * 4540 6403 4353 4781 3179 5894 5309 * * 78 0 * * * * * 0 6359 0 1632 L 79 3796 * 4831 5521 5498 5244 5427 3647 * 1044 3680 * * 6578 * 6039 4161 4085 * 5963 79 0 * * * * * 0 6359 0 1632 W 80 4473 * * * 4458 * * 1956 * 1280 4999 4951 * * 6055 * 6073 4122 6457 3686 80 16 * 6476 * * 937 1066 6327 0 1632 Q 81 4342 * 6322 1821 * * * * 2431 5230 6149 4504 6490 3785 2238 4545 6018 5889 * 6154 81 15 6632 * 0 * 0 * 6330 1000 1728 Q 82 2525 * * 2916 * * * 4951 2511 5855 * 4298 6446 2487 2890 4172 5544 5948 * * 82 21 6097 * 0 * * * 6292 1000 0 L 83 5967 * * * 1869 * * 2589 * 1204 4111 * * * * * * 6197 5962 5485 83 0 * * * * * * 6191 0 0 A 84 2741 * 3614 3100 5540 * 6025 4733 3387 3572 * * 5057 3246 2413 4525 * * * 4992 84 39 6013 6461 2000 415 * * 6096 1000 0 A 85 3225 * 3314 2123 5794 4212 * * 3475 5728 * 4701 4527 3693 3746 3432 4851 5552 * * 85 68 5018 6022 1797 490 * 0 6090 1595 1000 A 86 2025 * 5044 2944 5805 * * 3739 5497 2503 5836 * * 5536 5555 3570 3823 4808 * 4268 86 32 5526 * 3585 126 953 1049 5977 1000 1662 E 87 5821 5390 3170 2147 3560 * 4828 5771 3464 3562 * 5334 5277 3971 3535 4604 4327 5923 * * 87 0 * * * * * 0 5942 0 1000 A 88 3369 * 2815 4563 * 4486 5830 5307 3730 * 5462 2698 2791 * 4619 3111 4158 5489 * * 88 0 * * * * 0 * 5774 0 1000 S 89 4488 * 2867 2298 * 2466 * 5515 4599 * * 3763 3581 3428 * 4562 4186 5413 * * 89 116 4398 5064 1875 459 * * 5706 1746 0 F 90 2770 * 3186 3115 2199 4435 4903 5205 * 4111 * 4226 * * * 3308 5026 4759 * 5400 90 96 * 3964 * * 0 * 5564 0 1000 D 91 5410 * 1864 3645 * 4353 * * 5106 4090 * 1602 4151 * 4972 4888 4889 * * * 91 0 * * * * 0 * 5441 0 1644 P 92 3025 * * 3956 * * * 4811 2922 * * * 904 4448 * 4994 * 4891 * * 92 0 * * * * * * 5072 0 0 R 93 * * * * * * * 3609 1800 * * 4184 * 3456 1364 4604 * * * 4181 93 122 3620 * 1723 521 * * 4870 1572 0 K 94 * * * 3355 * * * * 1320 * * * * 2940 1889 4237 4366 * * * 94 108 3792 * 1585 585 * * 4753 1000 0 T 95 3641 * 3849 * * * * * 3640 * * 4068 * 3896 * 999 2805 * * * 95 0 * * * * * * 4294 0 0 W 96 * * * * 3335 * * * * * * * * * * * * * 151 * 96 0 * * 0 * * * 3619 0 0 //