HHsearch 1.5 NAME c3htuE_ FAM FILE c3htuE_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3htuE_.a3m DATE Sat Aug 28 16:26:07 2010 LENG 75 match states, 75 columns in multiple alignment FILT 54 out of 58 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.7 EVD 0.4146 0.8459 SEQ >ss_dssp CCHHHHHHHHHHHHHTSSCSSCEEEHHHHHHSGGGTTSTTTTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEC >sa_dssp EDCCDCADCACEBADDDEEEDBEBDAEDABDCEEBEECEADECDDECABEAADBADEDEDBDCDEEEEDDBACAD >ss_pred CCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEECC >ss_conf 987899999999999729848678999711588877776358998999999999987194699844898614229 >Consensus RtpxeWaxxixxWvxxtGxxxtVxTxyELxxGdxtxxxefxgldxxxLxkaLxxLxxxgkaxixxxxdxxGVKFf >c3htuE_ RRPEEWGKLIYQWVSRSGQNNSVFTLYELTNGEDTEDEEFHGLDEATLLRALQALQQEHKAEIITVSDGRGVKFF >UniRef50_O74967(101-166:175) Vacuolar protein-sorting-associated protein 25 n=1 Tax=Schizosaccharomyces pombe RepID=VPS25_SCHPO E=6e-12 s/c=1.09 id=34% cov=89% RSISEWGNMILKWLSDMGREGSICTFYELQE----QYKEVDCLDEVLLHKVLELLMKKGNIELMKGSSGK----- >UniRef50_UPI000187D78C(110-182:182) hypothetical protein MPER_10611 n=1 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187D78C E=1e-18 s/c=1.28 id=31% cov=99% RSPDEWAEALHTWASSIGSLNKIMTFYEITEPE--IESSLSGMPIPLLRKAIAILAKTNRAQLIAIPGGERVRFF >UniRef50_Q6CEC3(94-165:169) YALI0B16786p n=1 Tax=Yarrowia lipolytica RepID=Q6CEC3_YARLI E=3e-16 s/c=1.19 id=33% cov=97% RSAEEWATLILAWIDSTGQNGSIVTFYDIAGDDSPGVPEMVGMDSTMLHKVCQVLVHQGKAAVMRDEDGNEV--- >UniRef50_A8IA47(99-174:175) Subunit of ESCRT-II complex n=2 Tax=Viridiplantae RepID=A8IA47_CHLRE E=2e-16 s/c=1.14 id=32% cov=100% RRVDEWAGAVTEFVRTFGLSDSVMTVDELSSGDDVRGTDLYGVHPEILTRALKLLEAQGKVRTFKGatPEELGVKF- >UniRef50_Q964T3(127-200:201) P protein n=2 Tax=Paramecium RepID=Q964T3_PARPR E=6e-14 s/c=1.06 id=23% cov=99% -SPFELADAIYAWAKEKKLIGYTETLRGITEGSQTdQSKKFYNLPQEQILKACLILEETGRCQVYEFDGLYSIKF- >UniRef50_C5DH76(105-178:180) KLTH0E01958p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DH76_LACTC E=8e-19 s/c=1.28 id=34% cov=99% RSVDYWSSQILQWFETTGKVNQVVTVYELLEGDETLGWEFHGMHPSLCEESLQKLRDRGRATLLKEQNKiMGVK-- >UniRef50_C5MIY0(122-200:202) Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5MIY0_CANTT E=5e-13 s/c=0.96 id=36% cov=93% ----EWGNELYNYIDESGQKGTVMTIYELTKNDEgvtSIPDGLINLDEAFLIRIVKdYLIKQGKAQLLLDENNEigGVK-- >UniRef50_A2E6I8(110-186:186) Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2E6I8_TRIVA E=5e-16 s/c=1.11 id=34% cov=101% RTTQQIGDMVRQYLDNIGSLNTMMTYEELINGDETEGEGFHGLSADEFHDAMTFMESKGRCKIIPGSSlvEYGVKFF # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * R 1 * * * * * * * * 2529 * * * * * 275 * * * * * 1 0 * * * * * * 4099 0 0 R 2 * * * * * * * * 2995 5447 * * * * 2592 1644 1451 * * * 2 0 * * * * * * 4373 0 0 P 3 4176 * * * * * * 3712 * 3056 * * 725 * * * 4600 3293 * * 3 0 * * * * * * 4373 0 0 E 4 2793 * 2110 1425 4579 * * * * * 5626 * * 3879 * 4983 4514 4438 * * 4 0 * * * * * * 4736 0 0 E 5 * * 4637 606 * * * * * * * * * 2792 5862 3325 * 5688 * 5502 5 0 * * * * * * 4773 0 0 W 6 * * * * * * * 4514 * 3440 * * * * * * * * 244 5653 6 0 * * * * * * 4773 0 0 G 7 798 * * * * 1927 * * * * * * * * * 2628 * * * * 7 0 * * * * * * 4773 0 0 K 8 4154 * 1733 3757 * 4285 * * 3871 * * 2887 * 4102 * 2502 4128 5483 * * 8 0 * * * * * * 4773 0 0 L 9 2758 * 4837 4445 * * * 2544 5681 1867 2912 * * 4500 * 5488 5196 3651 * * 9 0 * * * * * * 4773 0 0 I 10 * * * * 5450 * * 1039 * 1913 5033 * * * * * * 2362 * * 10 0 * * * * * * 4773 0 0 Y 11 3827 * * 4208 4662 * 3089 * * 2311 * * * 5681 4514 * 5448 6269 * 1259 11 0 * * * * * * 4773 0 0 Q 12 3275 * 2205 2678 * 5745 5883 * 3032 * * 3607 * 2150 4746 * 5576 * * * 12 0 * * * * * * 4773 0 0 W 13 * * * * 3590 * 5652 * * * * * * * * * * * 314 3428 13 0 * * * * * * 4773 0 0 V 14 1545 5196 * * 3965 * * 3487 * 3762 * * * * * * * 1310 * * 14 0 * * * * * * 4773 0 0 S 15 5673 4310 2501 2167 * * * 5387 3542 * 4672 5613 * 4736 3495 3009 4925 3684 * * 15 0 * * * * * * 4773 0 0 R 16 5770 * 2485 2110 * 5196 * * 3582 * * 3145 * 3947 3973 2967 3456 * * * 16 24 5926 * 4459 67 * * 4773 1000 0 S 17 * 4699 * * 5448 * 5483 3949 4596 4310 5062 2400 * * * 2737 1357 * * * 17 0 * * * * * * 4773 0 0 G 18 3957 * * * * 199 * * 4596 * * 5450 * * * * * * * * 18 0 * * * * * * 4773 0 0 Q 19 * * * * 4829 * 4077 * 3376 2470 3260 5315 * 1594 4356 3949 * 5681 * 4837 19 0 * * * * * * 4773 0 0 N 20 * * * 4306 * 6043 * 3398 2584 2016 * 3070 * 3770 5745 4159 3362 4033 * * 20 0 * * * * * * 4773 0 0 N 21 * * 4042 * * 1241 * * 5488 * * 1185 * * 5498 4961 * * * * 21 0 * * * * * * 4773 0 0 S 22 * * * * * 6978 * * 5576 * * 5483 * 3453 * 1474 1378 3806 * 4596 22 0 * * * * * * 4773 0 0 V 23 * * * * * * * 2546 * * 4514 * 5688 * * * 4596 465 * * 23 0 * * * * * * 4773 0 0 F 24 * 2074 * 3938 3588 * * 4312 * 2024 2272 * * * * * * 3173 * * 24 0 * * * * * * 4773 0 0 T 25 * * * * * * * * * * * * * * * * 0 * * * 25 0 * * * * * * 4773 0 0 L 26 * * * * 2089 * * 3573 * 1421 * * * * * * * 1922 * 4514 26 0 * * * * * * 4773 0 0 Y 27 * * 5448 3957 3324 5033 5613 * * * * * * * 4596 * * * 5673 513 27 0 * * * * * * 4773 0 0 E 28 * * 4480 168 * 4596 * * * * * * * * * 5387 * * * * 28 0 * * * * * * 4773 0 0 L 29 * * * * * * * 1360 * 712 * * * * * * * * * * 29 0 * * * * * * 4773 0 0 T 30 2951 5196 * * * * 4086 3319 * 4589 * 5488 * 3010 3656 3924 1892 4075 * 5483 30 78 * 4246 * * * * 4773 0 0 N 31 4067 * 3613 1594 * 5047 3631 * 3988 5657 * 3325 * 3696 * 2675 * * * * 31 45 * 5015 * * * 0 4740 0 1687 G 32 5689 * 4992 * * 297 * * * * * 5323 5286 * * 3561 * * * * 32 31 5551 * 3585 126 1205 821 4694 1000 2144 E 33 * * 1046 1651 * * * * * * * 4178 5545 * 4971 4561 4432 * * * 33 32 * 5498 * * * 0 4714 0 1638 D 34 4874 * 1797 1988 5415 4369 5542 * * 3685 * 3824 4660 4432 * 4313 5006 5877 * * 34 36 5325 * 1585 585 1623 567 4631 1000 1999 T 35 4370 * * * * 3797 * * * * * 5163 3832 * * 2436 1154 2761 * * 35 97 3942 * 0 * 0 * 4646 1556 1598 E 36 5355 * 5803 3140 * 5241 5879 3248 3761 2880 5431 4833 5023 2653 3912 4629 4096 3783 * * 36 0 * * * * * * 4775 0 0 D 37 5484 * 3837 4155 * 1750 4830 * 4689 * 5709 3542 4615 6199 4691 2260 5879 5241 * 5060 37 0 * * * * * * 4775 0 0 E 38 * 5209 5394 1607 * 4371 * * 3424 5659 4838 * 5110 3088 * 3900 2790 * 3908 * 38 41 5145 * 3946 97 * * 4713 1505 0 E 39 4267 * 3141 1066 * 3685 * * 3816 * * 5480 4260 5503 * 3386 * 5966 * * 39 32 * 5503 * * * * 4716 0 0 F 40 * * * * 513 * * 4557 * 2425 4653 * * * * * * 5031 * * 40 0 * * * * * 0 4698 0 1000 H 41 * * 5036 * * * 1257 5326 5654 * * 5782 * 4102 5814 4025 5861 4048 5606 1986 41 0 * * * * * 0 4725 0 1000 G 42 5549 5036 * 4782 * 707 * * * 5385 * 2428 * 5650 5425 4802 6565 * * * 42 0 * * * * 0 * 4725 0 1000 L 43 4822 * * * * * * 2785 * 1292 1569 * * * * * * 3757 * * 43 0 * * * * * * 4715 0 0 D 44 * * 975 3676 * * 3884 * * * * 4628 2047 5636 * 4544 * * * * 44 0 * * * * * * 4743 0 0 E 45 3443 * 4025 1959 6004 5642 * 4163 5608 5856 * * 2976 3588 4637 3833 3233 4911 * * 45 0 * * * * * * 4743 0 0 A 46 3295 * 2448 1970 * 4627 * * * 5656 * * 3969 4720 * 3054 3238 5072 4596 * 46 0 * * * * * * 4743 0 0 T 47 * * * 4544 4237 * * 2410 * 1900 3244 * * 3864 * * 4102 2214 * * 47 0 * * * * * * 4743 0 0 L 48 * 3781 * * 3683 * * 3836 * 517 4325 * * * * * * 5017 * * 48 0 * * * * * * 4743 0 0 L 49 6427 * * 4484 * * 3284 4481 4224 2288 2959 * * 5856 2519 * 3232 3509 * 5420 49 0 * * * * * * 4743 0 0 R 50 * * 4096 4476 * * * * 1160 3729 * 6135 * 3650 2082 5635 * * * 5420 50 0 * * * * * * 4743 0 0 A 51 608 5420 * * * * * 5324 * * * * * * * 3067 * 2505 * * 51 0 * * * * * * 4743 0 0 L 52 5017 3731 * * * * * 2719 * 608 4544 * * * * * * 4535 * * 52 0 * * * * * * 4743 0 0 Q 53 4083 * 5334 2835 * 3391 5155 * 2298 4467 * 3967 * 3113 3217 5866 3324 * * * 53 92 4020 * 0 * * * 4743 1529 0 A 54 4257 4527 * * 4544 * 5442 2430 3847 2743 * * 5420 * 4472 * 4065 2119 * 3724 54 0 * * * * * * 4743 0 0 L 55 * 5856 * * * * * * * 121 4544 * * * * * * 5642 * * 55 25 * 5854 * * * * 4743 0 0 Q 56 5363 5411 5348 1265 * 5888 * 4551 * * 5031 * * 3264 5470 5449 * 1880 * * 56 0 * * * * * 0 4709 0 1000 Q 57 3346 * 3465 2985 * 4728 4391 * 1346 5348 * 4580 * 4833 4775 4470 5449 * * * 57 0 * * * * 0 * 4709 0 1000 E 58 * * * 2709 * * * * 2605 * * * * 2350 1762 3756 3087 * * * 58 0 * * * * * * 4743 0 0 H 59 * * * 5754 * 525 4257 * 3979 * * 3427 * 5802 4643 5648 * * * * 59 0 * * * * * * 4743 0 0 K 60 * 5462 * * * * * * 812 * * 5072 * 4389 1598 * * * * * 60 0 * * * * * * 4743 0 0 A 61 582 2164 * * * 5854 * 5072 * 5625 * * * * * * * 4594 * * 61 0 * * * * * * 4743 0 0 E 62 3265 * * 1901 * * * * 4055 5765 * 5414 * 1503 5440 * 2924 5754 * * 62 0 * * * * * * 4743 0 0 I 63 * * * * * * * 1740 * 1545 3630 * * * * * 4060 2202 * * 63 0 * * * * * * 4743 0 0 I 64 * * * * 1766 * * 1768 * 2313 2592 * * * * * * * * 4467 64 97 4296 6135 692 1393 * * 4743 1555 0 T 65 3541 * 5734 2861 * 3039 * 5803 2092 3938 4857 5629 4534 4673 4391 3639 4229 * * * 65 85 4849 5457 610 1536 * 0 4748 1537 1000 V 66 5381 * 2767 4496 4023 1572 * 3595 * 4013 4135 4949 * 5561 * 3965 4674 5130 * * 66 166 3526 5528 1445 660 960 1041 4727 2271 1582 S 67 4079 * 2020 2320 * 3445 * * 4791 * * 3341 4347 4291 * 3030 4481 * * * 67 243 2869 5802 1603 576 1000 1000 4725 2623 1441 D 68 * * 1291 2241 * 2687 * * 5700 * * 3450 * * * 3418 * * * 5628 68 94 3991 * 1550 603 * 0 4717 1571 1408 G 69 5287 * 3417 2161 * 2021 * * 4292 4434 * 2440 * 5285 * 3272 * * * * 69 132 3516 * 265 2575 1000 1000 4717 2178 1408 R 70 * * 3693 1984 * 4808 5587 5744 3315 3912 5486 4197 * 3996 4852 4597 4151 3899 * 3487 70 99 3921 * 1193 830 0 * 4741 1728 1000 G 71 * * * 4985 * 200 * * * * * * * * 5290 4399 * 5328 * * 71 0 * * * * * * 4604 0 0 V 72 * * * * * * * 3180 * * * * * * * * * 169 * * 72 0 * * * * * * 4521 0 0 K 73 * * * * * * * * 92 * * * * * 4010 * * * * * 73 0 * * * * * * 4448 0 0 F 74 * * * * 0 * * * * * * * * * * * * * * * 74 0 * * * * * * 4149 0 0 F 75 * * * * 60 * * * * * * * * * * * * * * 4613 75 0 * * 0 * * * 3455 0 0 //