HHsearch 1.5 NAME c3fwcN_ FAM FILE c3fwcN_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3fwcN_.a3m DATE Sat Aug 28 15:43:33 2010 LENG 84 match states, 84 columns in multiple alignment FILT 16 out of 20 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.8 EVD 0.4012 -1.5265 SEQ >ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >sa_dssp EEEEDDEDEDEEEEEEDDDDDDDDEDEEDECDDEEEEEEDDDDEEEDDDDEDEDEEDDDDDEDEEEEEEDDDDEDDEEDEEEEE >ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >ss_conf 988999999999999999999999999999999999999999999999999999999999999999999989999999962059 >Consensus xxxxixxqixxxiixxvVxxeLxxxlxxxxxxxxxrxxxIxsLsxELyxAFixExiYxxxlesxAdxxxxkxlkKxxxxkWxxx >c3fwcN_ SKQVITEQIANDLVKEVVNSSVISIVKREFSEANYRKDFIDTMTRELYDAFLHERLYLIYMDSRAELKRNSTLKKKFFEKWQAS >UniRef50_Q6CQI8(697-778:1303) KLLA0D16775p n=1 Tax=Kluyveromyces lactis RepID=Q6CQI8_KLULA E=2e-18 s/c=1.14 id=17% cov=99% -RNEIVNETSSNIFTTLMEQQLEKTIKNEIQKRQANALHIENLSRDLFRSFIHEQIYFVFLEVRADIFKKKIITMHVMKKWRS- >UniRef50_C5DMU8(694-766:1274) KLTH0G11770p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DMU8_LACTC E=4e-15 s/c=1.13 id=28% cov=88% --------VASSLIQDVVGKLLQKFAKECLAQSKANQKRNELLAEELYQAFLHEKLYFISLETKADLKLQTRTLKAAWNSW--- >UniRef50_Q6FVK8(630-711:1195) Strain CBS138 chromosome E complete sequence n=1 Tax=Candida glabrata RepID=Q6FVK8_CANGA E=6e-18 s/c=1.12 id=28% cov=96% -KESLILDIYNQVKNEVIHKNVSNIVEVSLKQRSHKSQIISDFSGDLFRAFIHEQLYMIYLQSHADILLEKSMGKKYLLTW--- >UniRef50_C5DYK6(734-809:1312) ZYRO0F13794p n=1 Tax=Zygosaccharomyces rouxii RepID=C5DYK6_ZYGRO E=1e-16 s/c=1.15 id=32% cov=89% -------QITEEIIKDVVHKQITSTIEKQVQANKGRDARIAELSDVLYRAYIHEKLYLIFLGSKAENHYDKLLVRKSMNKW--- >UniRef50_C4XW12(840-920:1358) Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4XW12_CLAL4 E=4e-15 s/c=1.02 id=27% cov=94% ----IAEQIYGQIENSVLDEELAKLLGRLIKHRNRleeRNQIIESFTSELYSAFVSELTHQSTLTILADEYCKRITLKHAFSNWQ-- >UniRef50_A5DBS7(734-811:1212) Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DBS7_PICGU E=1e-13 s/c=0.99 id=28% cov=86% -----SRQITDVLIQKCIESELLSSLPAFVNRERHnraREQIVSSLSKELFDAFLSEVIYQRILASKADEYYHKILKKK-------- >UniRef50_C4QVL1(657-741:1055) Nuclear pore-associated protein, forms a complex with Thp1p n=1 Tax=Pichia pastoris GS115 RepID=C4QVL1_PICPG E=1e-12 s/c=0.87 id=24% cov=95% --SILIKKTISPLIAPIVNNQLeeynrrQTVLRDQERQNQRRQLLISSLQEELYSAFIREQVYIQVVDTQAKECFNKNLKRRIFQKF--- >UniRef50_A5DTR2(891-966:1455) Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DTR2_LODEL E=1e-12 s/c=0.97 id=23% cov=85% -----VEATLQKIVTDCIDNELRNLLPNIFQDYNAKTQrvnMIKSLGSQLFDAFMSEIIYNQSQECLADQFCNSLTKK--------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 * * * * * * * * * * * * * * * 0 * * * * 1 0 * * * * * * 1000 0 0 K 2 * * * * * * * * 970 * * * * * 1030 * * * * * 2 0 * * * * * * 2550 0 0 Q 3 * * * 2327 * * * * * * * 1378 * 2318 * 2213 * * * * 3 0 * * * * * * 2988 0 0 V 4 2436 * * 2323 * * * 2213 * * * * * * * 2327 * 2318 * * 4 0 * * * * * * 2988 0 0 I 5 * * * * * * * 999 * 1557 * * * * * * * 2646 * * 5 0 * * * * * * 3265 0 0 T 6 2173 * * * * * * 2058 * * * * * * * 3284 3087 1654 * * 6 0 * * * * * * 3691 0 0 E 7 * * * 1738 * * * * 2434 3210 * 3191 * 3296 3453 * 3262 * * * 7 0 * * * * * * 3875 0 0 Q 8 3701 * 3441 2456 * * * * 3479 * * * * 839 * * * * * * 8 0 * * * * * * 4045 0 0 I 9 * * * * * * * 921 * 3646 * * * * * * 2043 2743 * * 9 0 * * * * * * 4152 0 0 A 10 2688 * * * 2904 * * 3585 * 3791 * * * * * 3520 2129 * * 2059 10 0 * * * * * * 4152 0 0 N 11 * * 2262 3612 * 3576 3797 * * * * 2617 * 2806 * 2012 * * * * 11 0 * * * * * * 4152 0 0 D 12 * * 3696 2323 * * * * 3935 * * 3585 3670 2105 * 2933 3871 3968 * * 12 0 * * * * * * 4173 0 0 L 13 * * * * * * * 1059 * 1437 3875 * * * * * * 3599 * * 13 0 * * * * * * 4173 0 0 V 14 * * * 3612 2721 * * 1423 3599 2568 * * * * * * * 2811 * * 14 0 * * * * * * 4173 0 0 K 15 3670 * * * * * * * 2664 * * 2605 * 1417 3713 * 2749 * * * 15 0 * * * * * * 4173 0 0 E 16 * * 1797 2647 * 4123 * * 3968 * * 4538 3670 * 3871 3612 2648 * * * 16 0 * * * * * * 4173 0 0 V 17 3713 2951 * * * * * 3670 * 3585 * * * * * * 2078 1338 * * 17 0 * * * * * * 4173 0 0 V 18 * * * * * * * 1679 * 3612 3585 * * * * * * 936 * * 18 0 * * * * * * 4173 0 0 N 19 3713 * 2289 2764 * 3765 2616 * 3875 * * 2331 * * * 3871 * * * * 19 0 * * * * * * 4173 0 0 S 20 * * * 3612 * * 4123 * 2079 * * 2796 * 3585 * 1333 * * * * 20 0 * * * * * * 4173 0 0 S 21 * * * 1158 * * 3713 * * 3765 * 3599 * 2044 * 3696 * * * * 21 0 * * * * * * 4173 0 0 V 22 * * * * * * * 3633 * 549 * * * * * * * 2084 * * 22 118 3670 * 2585 263 * * 4173 1000 0 I 23 3612 * * 3585 * * 4538 3696 * 3968 * * * 1793 2820 2837 3633 * * * 23 0 * * * * * * 4173 0 0 S 24 4123 * * * * * * * 2067 * * 2757 * * 4538 1747 3670 2873 * * 24 0 * * * * * * 4173 0 0 I 25 * * * 3713 3765 * * 2647 * 2014 * * * * * 3968 2609 2217 * * 25 0 * * * * * * 4173 0 0 V 26 3765 * * * * * * 2058 * 925 * * * * * * * 2647 * * 26 0 * * * * * * 4173 0 0 K 27 * * * 2179 * 3684 * * 2208 * * * 2102 4335 3791 2942 * * * * 27 0 * * * * * * 4098 0 0 R 28 2886 * 3791 3850 * * * * 2407 * * 2870 * 4218 1896 * * 3728 * * 28 0 * * * * * * 4098 0 0 E 29 * 3850 * 2346 3938 * * 2933 * 2031 * * * 2760 * 3728 * 3836 * * 29 0 * * * * * * 4098 0 0 F 30 * * * 3791 2285 * * 1974 * 2267 * 3836 * 4335 * * * 2830 * * 30 0 * * * * * * 4098 0 0 S 31 3850 * * * * * * * 1852 * * 2918 * 1934 3030 3752 3988 * * * 31 100 3898 * 1585 585 * * 4098 1000 0 E 32 2046 * 3969 3752 * * 3684 * 2807 * * * * 2204 2458 * * * * * 32 0 * * * * * * 4098 0 0 A 33 2894 * * 3192 * * * * * * * 2836 * 4357 1655 4007 4073 * * 2966 33 66 4477 * 1585 585 * * 3891 1000 0 N 34 4073 * * 3912 * * 3977 * 2414 * * 1655 * 2522 3954 3904 * * * * 34 95 3977 * 1585 585 * * 3891 1000 0 Y 35 2401 * * 2038 * 3769 2929 * 3165 * * * * * 2434 * * * * 3924 35 292 2450 * 1585 585 * * 3891 1879 0 R 36 * * * * * * 4357 * 2390 * * 3002 * * 654 * * * * * 36 0 * * * * * * 3891 0 0 K 37 2954 * 3769 3954 * * * * 2042 * * 3038 * 2956 3977 3904 3192 * * * 37 0 * * * * * * 3891 0 0 D 38 3769 * 3924 * * * * * 2551 2406 * * * 1449 2888 * * * * * 38 96 3954 * 1585 585 * * 3891 1000 0 F 39 * * * * 3084 * 3998 1651 * 2909 3012 * * * 2883 * * 3205 * * 39 0 * * * * * * 3891 0 0 I 40 * * * * * * * 196 * * * 4007 * * * * * 3954 * * 40 0 * * * * * * 3891 0 0 D 41 3769 * 3084 2362 * 4357 3977 * 3192 * * 3865 * * * 1626 * * * * 41 0 * * * * * * 3891 0 0 T 42 * * 3904 3769 * * * 4073 4263 2934 * 3998 * * * 1243 2918 * * * 42 0 * * * * * * 3891 0 0 M 43 * * * * 2873 * * * * 326 3924 * * * * * * * * * 43 0 * * * * * * 3891 0 0 T 44 3129 * * * * 2346 * * * * * * * 3907 * 1038 2883 * * * 44 0 * * * * * * 3891 0 0 R 45 * * 2913 1677 3977 3904 * * 3954 * * 3366 * * 2961 2898 * * * * 45 0 * * * * * * 3891 0 0 E 46 * * 2950 449 * * * * * * * * * 3954 * * * 3769 * * 46 0 * * * * * * 3891 0 0 L 47 * * * * * * * 3912 * 99 * * * * * * * * * * 47 0 * * * * * * 3891 0 0 Y 48 * * * * 1654 * * * * * * * * * * * * * * 552 48 0 * * * * * * 3891 0 0 D 49 * * 1412 * * * * * * * * 4073 * 3223 1893 2875 * * * 4263 49 0 * * * * * * 3891 0 0 A 50 93 * * * * * * * * * * * * * * 3998 * * * * 50 0 * * * * * * 3891 0 0 F 51 * * * * 110 * * * * * * * * * * * * * * 3769 51 0 * * * * * * 3891 0 0 L 52 * * * * 3865 * * 1405 * 1698 3192 * * * * * * 2877 * * 52 0 * * * * * * 3891 0 0 H 53 * * * * * * 1177 * * * * * * * 2347 1470 * * * * 53 0 * * * * * * 3891 0 0 E 54 * * 3865 103 * * * * * * * * * * * * * * * * 54 0 * * * * * * 3891 0 0 R 55 * * * * * * * 2140 2883 3843 * 3912 * 2351 3084 * 4073 2966 * * 55 0 * * * * * * 3891 0 0 L 56 * * * * * * * 2080 * 1609 3977 * * * * * 2877 2082 * * 56 0 * * * * * * 3891 0 0 Y 57 * * * * 4263 * 3843 * * * * * * * * * * * * 187 57 0 * * * * * * 3891 0 0 L 58 * * * 2920 1996 * * 3074 4477 2844 3904 3954 * 2450 * * * * * * 58 0 * * * * * * 3891 0 0 I 59 * 3977 * * * * * 1898 * 3865 * * * 2931 3954 3843 2778 2408 * * 59 0 * * * * * * 3891 0 0 Y 60 * * * * 2015 * * 3954 * * * * * * * 2980 2108 2347 * 2914 60 0 * * * * * * 3891 0 0 M 61 * * * * * * * * * 552 3924 4263 * 3954 * * * 3907 * 3865 61 0 * * * * * * 3891 0 0 D 62 3954 * 2329 925 * 3769 * * * * * * * 3904 * * 3843 * * * 62 0 * * * * * * 3891 0 0 S 63 2920 3954 * * * * * 3843 * * * * * * * 1191 2409 3218 * * 63 0 * * * * * * 3891 0 0 R 64 * * * * 3912 * 3904 * 1451 2898 * * * 3907 1736 * * * * * 64 0 * * * * * * 3891 0 0 A 65 0 * * * * * * * * * * * * * * * * * * * 65 0 * * * * * * 3891 0 0 E 66 3959 * 947 2181 * * * * 3753 * * * * * * * * 4168 * 3906 66 0 * * * * * * 4185 0 0 L 67 * * * 1828 * * * 2255 * 2775 * 3650 * 2272 * 3716 * * * * 67 0 * * * * * * 4210 0 0 K 68 * 3689 * * 1229 * 3650 * 2775 3635 * * * 4479 * * * * * 2789 68 0 * * * * * * 4210 0 0 R 69 * 2761 * * 3689 * 4479 * 3569 2693 * * * * 3797 * * * * 1254 69 0 * * * * * * 4210 0 0 N 70 * * 2737 3635 * * 3940 * 2610 * * 1853 * 3754 * 4479 3716 3864 * * 70 0 * * * * * * 4210 0 0 S 71 * * * * 3829 * 4075 * 1110 3864 * * * * 3653 2436 3754 * * * 71 0 * * * * * * 4210 0 0 T 72 * * * * * * 3829 2127 * 2760 * 2282 * * 2735 3635 3797 * 4479 * 72 0 * * * * * * 4210 0 0 L 73 * * * * * * * 3569 * 895 3635 * * * 3716 * 2174 * * * 73 0 * * * * * * 4210 0 0 K 74 * * * * * 3635 * * 927 2122 * * * * * * 3569 3650 * * 74 0 * * * * * * 4210 0 0 K 75 * * * * * * * * 516 4075 3569 * * * 2669 * * * * * 75 0 * * * * * * 4210 0 0 K 76 3678 * * * * * 2479 * 1659 * * * * * 1534 * * * * 3631 76 0 * * * * * * 4130 0 0 F 77 2348 3388 * * 2837 * 3431 3384 * * * * * * * 3386 * 3281 * 2465 77 0 * * * * * * 4012 0 0 F 78 * * * * 1571 * * 3600 * 1801 2333 * * * * * * * 3389 * 78 0 * * * * * * 4012 0 0 E 79 * * * 2387 * * * * 3188 3253 * 2267 * 2515 * 3162 3326 * * * 79 0 * * * * * * 3798 0 0 K 80 * * * * * * 4010 * 696 * * 3162 * * * 3265 3253 * * * 80 0 * * * * * * 3798 0 0 W 81 * * * * 3054 * * * * * * * * * * * * * 185 * 81 0 * * * * * * 3388 0 0 Q 82 * * * * * * * * 2120 * * * * 1019 1854 * * * * * 82 0 * * * * * * 2428 0 0 A 83 1000 * * * * * * * * * * * * * * 1000 * * * * 83 0 * * * * * * 1777 0 0 S 84 * * * * * * * * * * * * * * * 0 * * * * 84 0 * * 0 * * * 1000 0 0 //