HHsearch 1.5 NAME c3f1iS_ FAM FILE c3f1iS_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3f1iS_.a3m DATE Thu Jan 10 01:13:54 2013 LENG 77 match states, 77 columns in multiple alignment FILT 14 out of 18 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.2 EVD 0.4473 0.8565 SEQ >ss_dssp CCCHHHHHHHHHHHHTCCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC >sa_dssp EDCEECDEDBEDBDEEDDEEDEEEDEEEAEEBDECCEEACEDDEDEDECDEDEEDEEDDEEDEDEEDEDEEEEEEEE >ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 97789999999999724999888881789999999998788899999999987999999999999999999998439 >Consensus xIDExkidxxLxxLxxadptxxxxDxxelxxLExxcxxMxplIdxkLexidrkhxxLtxLxxxlxealxLYxxlMxe >c3f1iS_ FIDEDKMDQLLQMLQSTDPSDDQPDLPELLHLEAMCHQMGPLIDEKLEDIDRKHSELSELNVKVMEALSLYTKLMNE >UniRef50_B7P999(265-335:392) Signal transducing adapter molecule, putative n=1 Tax=Ixodes scapularis RepID=B7P999_IXOSC E=2e-12 s/c=1.04 id=49% cov=94% -----QIDDTLQRLHETDPASGQPDPPDLLALEERCAGMGPLIEQELERIDRRHASLTAASRQLAEALALYHGLMR- >UniRef50_A8PT82(327-401:417) Variant SH3 domain containing protein n=1 Tax=Brugia malayi RepID=A8PT82_BRUMA E=2e-07 s/c=0.76 id=35% cov=92% -IDKTVLEECLRILEDCDPTGERPDPPELADLEQRSLAQASLIDARLAEIDRQHNALAQVDIAIRDVLSMY------ >UniRef50_C4PZ42(320-395:570) Signal transducing adapter molecule (Stam), putative n=2 Tax=Schistosoma RepID=C4PZ42_SCHMA E=6e-21 s/c=1.33 id=39% cov=99% -LDEKKIDECLRLITTVDPTGEfQQDPPELSQLEAECVAMVPLVDPELKLVDKEIIMLTELNQRLLDAFQLYHDIMS- >UniRef50_O01498(298-373:457) Signal transducing adapter molecule 1 n=4 Tax=Caenorhabditis RepID=STAM1_CAEEL E=5e-19 s/c=1.26 id=34% cov=95% -INEAILVRCLQVLHECDPTGERQDPEDLAQLEAASYAQGNLIDAHLASIDRQSNSLAQIDVAIRDVLALYDD---- >UniRef50_B3SA14(319-393:617) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3SA14_TRIAD E=2e-08 s/c=0.80 id=37% cov=99% -IDEEKIDITLEIFGKADITVN-ADTQELIDLEDTCNRMNYQVTNKLERLETKDQEVNTLKNQFEETLALYQKLMQE >UniRef50_A7RQF8(331-406:566) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RQF8_NEMVE E=6e-17 s/c=1.16 id=39% cov=100% -IDEDKIEECLSMLKAASVEGDDEQEDAIIDLEYACHNMEEIVNKKIEKSKAKHQDLSSLNEQYLQALALYQKLMKE >UniRef50_Q17IU1(192-477:688) Signal transducing adapter molecule (Stam) n=7 Tax=Coelomata RepID=Q17IU1_AEDAE E=1e-47 s/c=0.27 id=49% cov=101% EIDEEKIDRLLHLLHEADPEDPSADTDEMLQLEQMVNQMGPLIDTELERVDRRHAQLTQLSADLVEAINLYHTLMRE >UniRef50_UPI0000E465C3(203-500:606) PREDICTED: hypothetical protein n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000E465C3 E=4e-89 s/c=0.40 id=47% cov=101% KISTETMDQCLEMLQNADPTMERPDNPDMPLLEATCNGMAPLIDQELESIDRDHADLTALNHRLMDAFQMYHDLMKE >UniRef50_UPI0001792A8B(163-427:442) PREDICTED: similar to AGAP008494-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792A8B E=6e-65 s/c=0.44 id=44% cov=101% EIDENKIDCLLQLLREANPEDDSTDTEEMSILEAQANAMGPMIEAQLEQLDKKHSQLTQLCTELLEAVKLYNIFMKD # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * F 1 * * * 1343 2881 * * * 2398 * * * * * * * * 2949 * 2729 1 0 * * * * * * 2121 0 0 I 2 * * * * * * * 130 * 3540 * * * * * * * * * * 2 0 * * * * * * 3158 0 0 D 3 * * 275 * * * * * * * * 3456 * * * 3596 * * * * 3 0 * * * * * * 3158 0 0 E 4 * * * 275 * * * * 3459 * * * * * * * 3596 * * * 4 0 * * * * * * 3158 0 0 D 5 3456 * 1817 1991 * * * * 3540 * * 3646 * * * 3097 3459 * * * 5 0 * * * * * * 3158 0 0 K 6 * * * * * * * 3562 535 * * * * 3918 * * 3762 3553 * * 6 0 * * * * * * 3214 0 0 M 7 * * * * * * * 779 * 2557 2016 * * * * * * * * * 7 0 * * * * * * 3214 0 0 D 8 * * 570 2047 * * * * * * * * * * * * * 3562 * * 8 0 * * * * * * 3214 0 0 Q 9 * 3746 3918 1624 * * * 3189 * * * * * 2979 2074 * 4036 * * * 9 0 * * * * * * 3214 0 0 L 10 4072 1051 * * * * * * * 1826 * * * * * * 2508 * * * 10 0 * * * * * * 3214 0 0 L 11 * * * * * * * * * 0 * * * * * * * * * * 11 0 * * * * * * 3214 0 0 Q 12 * * * 2447 * * 2696 * * * * * * 1565 2576 2674 * * * * 12 0 * * * * * * 3214 0 0 M 13 * * * * * * * 2360 * 1998 1818 * * * 3918 * * 2794 * 4036 13 0 * * * * * * 3214 0 0 L 14 * * * * 3189 * * 3600 * 308 * * * * * * * * * * 14 0 * * * * * * 3214 0 0 Q 15 * * * 3553 * 3189 1712 * 2674 * * * * 2424 3746 * 3600 * * * 15 107 3804 * 1000 1000 * * 3214 1000 0 S 16 3555 * 3553 1397 * * * * 3189 * * 3762 * * * 2441 3600 * * * 16 0 * * * * * * 3214 0 0 T 17 1008 2557 * * * * * 4072 * * * * * * * * 3068 2698 * * 17 0 * * * * * * 3214 0 0 D 18 * * 468 3804 * * * * * * * 3057 * * * 3555 * * * * 18 0 * * * * * * 3214 0 0 P 19 * * * * * 3804 * 3189 * * * * 447 * * * * 3555 * * 19 0 * * * * * * 3214 0 0 S 20 3918 * 3804 1983 * * * * * * * * * * 4036 4235 1014 * * * 20 0 * * * * * * 3214 0 0 D 21 * * 1276 * * 1567 * * * * 3762 * * * * 3918 * 3189 * * 21 0 * * * * * * 3214 0 0 D 22 * * 2233 1330 * 3918 * * * * * 3189 3421 * * 3054 * * * * 22 308 3600 3189 0 * * * 3214 1000 0 Q 23 * * 3366 * * * * * 3857 * * * * 1689 1894 1973 * * * * 23 0 * * * * 0 * 3018 0 1000 P 24 2668 * * 2674 * 4036 * * * * * * 1566 2232 * * 3746 * * * 24 0 * * * * * * 3214 0 0 D 25 * * 128 * * * * * * * * * * 3555 * * * * * * 25 0 * * * * * * 3214 0 0 L 26 3804 * * 3555 * * * * * 4235 * 3762 1651 * * 2590 2109 * * * 26 107 * 3804 * * * * 3214 0 0 P 27 * * 2169 2618 * * * * * * * * 1191 2500 * * * * * * 27 0 * * * * * 0 3197 0 1000 E 28 2995 * 1772 781 * * * * * * * * * * * * * * * * 28 0 * * * * 0 * 3197 0 1000 L 29 * * * * * * * 2674 * 887 1725 * * * * * * * * * 29 0 * * * * * * 3214 0 0 L 30 2557 * * * * * * 1909 * 1878 * * 3762 * 4036 2671 * * * * 30 0 * * * * * * 3214 0 0 H 31 3918 * 1283 4036 * * 4235 3746 * 3762 * * * 1941 * * * * * * 31 0 * * * * * * 3214 0 0 L 32 * * * * * * * * * 0 * * * * * * * * * * 32 0 * * * * * * 3214 0 0 E 33 4036 * * 91 * * * * * * * * * * * * * * * * 33 0 * * * * * * 3214 0 0 A 34 1440 * 2564 2976 * * * * * * * * * 2485 * * * * * 2674 34 0 * * * * * * 3214 0 0 M 35 2051 * * 2403 * * * 4072 * * 3310 * * 3746 2724 * 2447 * * * 35 0 * * * * * * 3214 0 0 C 36 3746 734 * * * * * * * * * * * * * 2557 * 2696 * * 36 0 * * * * * * 3214 0 0 H 37 3918 * * * * * 1969 * * 3553 * 1710 * 4072 * * * 3600 * 2780 37 0 * * * * * * 3214 0 0 Q 38 1366 * * * * 2838 * * * * * 2674 * 2280 3189 * * * * * 38 0 * * * * * * 3214 0 0 M 39 * * * * * * * * * * 269 * * 2557 * * * * * * 39 0 * * * * * * 3214 0 0 G 40 2653 * * 2674 * 1022 * * * * * 3189 * * * * * 3600 * * 40 0 * * * * * * 3214 0 0 P 41 * * * 2674 * * * * * * * 3562 827 * * 3553 * * * 3189 41 0 * * * * * * 3214 0 0 L 42 * * * * * * * 2674 * 738 2900 * * 3189 * * * * * * 42 0 * * * * * * 3214 0 0 I 43 * * * * * * * 619 * * * * * * * * * 1520 * * 43 0 * * * * * * 3214 0 0 D 44 * * 754 2830 * * * * * * * 2674 * * * * 3189 * * * 44 0 * * * * * * 3214 0 0 E 45 1510 * * 3151 * * * * 2674 * * 3189 3600 2838 * * 4389 * * * 45 0 * * * * * * 3214 0 0 K 46 * * * 1663 * * 3562 * 1185 * * * * 3746 3553 * * * * * 46 0 * * * * * * 3214 0 0 L 47 * * * * * * * 2674 * 246 * * * * * * * * * * 47 0 * * * * * * 3214 0 0 E 48 2557 * * 420 * * * * 3600 * * * * * * * * * * * 48 0 * * * * * * 3214 0 0 D 49 * * 4235 2789 * * * * 2200 3600 * * * 3746 1893 2658 * * * * 49 0 * * * * * * 3214 0 0 I 50 * * * * * * * 1243 * 2441 * * * * * 2674 * 2078 * * 50 0 * * * * * * 3214 0 0 D 51 * * 447 3189 * * * * 2674 * * * * * * * * * * * 51 0 * * * * * * 3214 0 0 R 52 2674 * * * * * * * 2671 * * * * * 794 * 3189 * * * 52 0 * * * * * * 3214 0 0 K 53 * * 3762 3600 * * * * 836 * * * * 2557 3134 * * * * * 53 0 * * * * * * 3214 0 0 H 54 * * 3189 * * * 467 3600 * * * * * * * 3562 * * * * 54 0 * * * * * * 3214 0 0 S 55 1765 * * * * * * 3600 * * * 2557 * 1909 * 2418 * * * * 55 0 * * * * * * 3214 0 0 E 56 3553 * 2118 2170 * * * * * * 3600 * * 2127 * 2729 * * * * 56 0 * * * * * * 3214 0 0 L 57 * * * * * * * * * 168 * * * * * * * 3189 * * 57 0 * * * * * * 3214 0 0 S 58 2557 * * * * * * * * * * 3189 * * * 1893 1148 * * * 58 0 * * * * * * 3214 0 0 E 59 2838 * * 2358 * * * * * * * * * 1326 * 2674 3189 * * * 59 0 * * * * * * 3214 0 0 L 60 3918 * * * * * * 3562 * 388 * * * * * * * 3553 * * 60 0 * * * * * * 3214 0 0 N 61 * 3746 2557 * * * * * 3189 * * 1233 * * * 2181 * * * * 61 0 * * * * * * 3214 0 0 V 62 4389 * * 2674 * * 3762 3553 * * * 3189 * 3600 3918 3229 3746 2342 * * 62 0 * * * * * * 3214 0 0 K 63 2557 * 2696 3746 * * * * 3151 * * * * 1589 2679 * * * * * 63 0 * * * * * * 3214 0 0 V 64 * * * * 3189 * * 2557 * 1148 * * * * * * * 3151 * 2674 64 0 * * * * * * 3214 0 0 M 65 3918 * * 3189 * * * * * 1422 2979 * * * 2557 * * 2696 * * 65 0 * * * * * * 3214 0 0 E 66 * * 1428 1084 * * * * * * * * * 2674 * * * * * * 66 0 * * * * * * 3214 0 0 A 67 473 * * * * * * * * * * * * * * * 3189 2557 * * 67 0 * * * * * * 3214 0 0 L 68 * * * * 2679 * * 3421 * 565 * * * * * * * 3746 * * 68 0 * * * * * * 3214 0 0 S 69 1261 * * 4072 * * * * 3746 * * 2696 * 2679 * 2854 * * * * 69 0 * * * * * * 3214 0 0 L 70 * * * * * * * * * 250 2653 * * * * * * * * * 70 0 * * * * * * 3214 0 0 Y 71 * * * * * * * * * * * * * * * * * * * 0 71 0 * * * * * * 3214 0 0 T 72 * * 3165 * * * 1294 * * * * 2740 * 1869 * * 4132 * * * 72 0 * * * * * * 3076 0 0 K 73 * * 1797 * * 3829 * 3635 1322 * * * * * * 3993 3342 * * * 73 0 * * * * * * 3076 0 0 L 74 * * * * 3454 * * 3247 * 316 * * * * * * * * * * 74 0 * * * * * * 2899 0 0 M 75 * * * * * * * * * * 117 * * * * * * 3677 * * 75 0 * * * * * * 2899 0 0 N 76 * * * * * * * * 1461 * * 2809 * 3003 1922 3247 * * * * 76 0 * * * * * * 2899 0 0 E 77 * * 2410 301 * * * * * * * * * * * * * * * * 77 0 * * 0 * * * 2675 0 0 //