HHsearch 1.5 NAME c3eudE_ FAM FILE c3eudE_ COM /bmm/www/servers/phyre/brandnew/HH/hhmake -i c3eudE_.a3m DATE Tue Mar 9 16:47:38 2010 LENG 98 match states, 98 columns in multiple alignment FILT 44 out of 48 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.3 EVD 0.4451 0.8454 SEQ >ss_dssp CCBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEETTEEEEEECSSCEECSTTCEEEEETTTTEEEEEEEESSTTCCCTTTTCHHHHC >sa_dssp DEDEBECDBECDDCBADACACBDECEDEEEDDDCCBEECCACADAECBDADADBDDDBDECEDCDCEDCEEDDAADBDAABDDEECEADDBEDDEEAD >ss_pred CCCCCEEEEEECCCEEEEEEEECCCCCCCCCCEEEEECCEEEEECCCEEEEEECCCCEEECCCCEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHC >ss_conf 94154699985699699999967432466540389838789998084499997584245077650688222337999995055887078853257409 >Consensus xxiTPxFxisQddxxvxixIxxpxxxxsxxxxEixixxxxFxFxxxPYyLrLxlpxxvxedxxxxasYDxxxgxxtvxlxKxxxGexFxxLDlxtxLL >c3eudE_ KXITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENXIIFHLSPYYLRLRFPHELIDDERSTAQYDSKDECINVKVAKLNKNEYFEDLDLPTKLL >UniRef50_A2E2L5(3-95:432) Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2E2L5_TRIVA E=2e-06 s/c=0.57 id=35% cov=96% --LTPDFWITQDSDFLHFTIKCPNVR--AKDMELVVADTEFNFNAEPYMLILHFQHSLRDGEGCTASYDIDAGMFTATIKKAIPGEDFPEILLLTTL- >UniRef50_Q9TYM6(2-97:431) Protein SHQ1 homolog n=3 Tax=Caenorhabditis RepID=SHQ1_CAEEL E=0.0002 s/c=0.49 id=31% cov=97% --LTPVFWITQDDDALLIRIRAPHGNIAE--LDYDHGDYMFVFTCPPYFLRLHFKQmvEEYGSGNGSVEWKSDEGEFHIKVPKMHKKEHFSNLDMITELL >UniRef50_Q55EC4(2-95:583) Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q55EC4_DICDI E=7e-23 s/c=1.15 id=33% cov=97% --IIPKFSVDQNDEFIIVVAITPYIKASEA--DFYLLENQFKFYCKPYFLRLTFSHNIVENGKEKASFNVNTQEFTFYLPKEINGQKFNDLDLITKLL >UniRef50_UPI0001792CA2(2-95:452) PREDICTED: similar to SHQ1 homolog n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792CA2 E=3e-22 s/c=1.13 id=32% cov=97% --LTPNFELDQTDDYLIIKIKARFANVNE--TEVDVNGTQVTFHSSPYYLRLNLPGEVEETDSSSGSYDWESYVFTFTLNKVNPGEHFPDLNLINKFL >UniRef50_B8C5R5(3-125:608) Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8C5R5_THAPS E=2e-07 s/c=0.46 id=25% cov=97% --IIPRYTLSQTLTHVHIEVCIPHVRVSTSTLELVIDDKELHLYAPPaYLLKLILPQRVVDedlveeslanavtggggDGEASVSkrlveetvsngLQPS QLDVFIILRKEQDG-HWEDLDLLGRL- >UniRef50_Q4P6Y2(7-110:492) Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4P6Y2_USTMA E=0.0002 s/c=0.45 id=20% cov=91% ----PEYQATQDEGHVFIDVRCVARMAggwtGRQKPNIAVEGRIFGLHFDAYYLPLVLPGSVtrpdsdaeavrlVQAAKCESSSSKEHVSWRVTLNKVQP GEHFDGLE------ >UniRef50_UPI000186E414(9-85:450) conserved hypothetical protein n=1 Tax=Pediculus humanus corporis RepID=UPI000186E414 E=0.0006 s/c=0.59 id=26% cov=79% ----PKYHIEDDDEgKIVIKIIAPLAKPNEAN--FLIDNQNFIFVSNPYFLKTILPCPIY-DIPEFQTYDLQTFTHTVKFKKKS--------------- >UniRef50_Q4Q4P1(2-96:580) Putative uncharacterized protein n=3 Tax=Leishmania RepID=Q4Q4P1_LEIMA E=3e-24 s/c=1.18 id=35% cov=98% --ITPVFECSQEGGFVVIRIVLSAI-CKVMSAVFDIHETQFTFYCSPYYLRLRFDQCLQEGKGERASYDLEANVLTVYLPKANPAEVFTKLDNPAYLI >UniRef50_O43076(2-86:451) Protein shq1 n=2 Tax=Schizosaccharomyces RepID=SHQ1_SCHPO E=1e-21 s/c=1.22 id=35% cov=88% --ITPKFELRQDEEFVYLDVHTPYIKAK--NVEIDAFNNEVNFCIAPYFLKLELPGNVLDDDRANASYDISSGFVHIKFPKETPGEVFP--------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * * * * * * 0 * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 X 2 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 2 * * * * * * * 1000 0 0 I 3 * * * * * * * 916 * 1089 * * * * * * * * * * 3 0 * * * * * * 4245 0 0 T 4 * * * * * * * 3217 * * * * * * * * 164 * * * 4 0 * * * * * * 4251 0 0 P 5 * * * * * * * * * * * * 0 * * * * * * * 5 0 * * * * * * 4459 0 0 R 6 4143 * 4246 3515 4182 * * 4121 2602 * * 5685 * 5114 1789 5881 5636 3100 * 4858 6 0 * * * * * * 4459 0 0 F 7 * * * * 203 * * * * * * * * * * * * * * 2928 7 0 * * * * * * 4459 0 0 S 8 * * 4899 1880 4975 * 3678 * 4256 * * * * 3671 3732 2668 2967 5143 3939 * 8 0 * * * * * * 4459 0 0 I 9 4168 2878 * * * * * 1601 * 1545 * * * * * * 5750 3091 * * 9 0 * * * * * * 4459 0 0 T 10 * * 3712 2804 * * * 5500 * * * 4601 * * 4159 1578 1617 * * * 10 0 * * * * * * 4459 0 0 Q 11 * * 4822 * * * * * * * * * * 52 * * * * * * 11 32 5497 * 1000 1000 * * 4459 1000 0 D 12 * * 609 5115 * * * * * * * 2819 * * * 5489 2724 * * * 12 0 * * * * * * 4459 0 0 E 13 4920 5984 1209 2201 * 5115 * * 5413 4631 * 3840 4427 * 4899 4095 * * * * 13 0 * * * * * * 4459 0 0 E 14 5730 * 2361 1675 * 3565 * * 3081 * * 3944 * 5524 * 4421 3437 4474 * * 14 131 4822 4289 0 * * * 4459 1000 0 F 15 3391 * * 4844 1360 * 2922 * 3768 * * * * * * 3922 5436 * 4482 2826 15 0 * * * * * 0 4420 0 1489 I 16 * * * * * * * 2007 * 1944 * * * * * * * 1025 * * 16 0 * * * * 0 * 4420 0 1489 F 17 5841 * * * 2802 * 3510 1642 3801 4813 * * * * * 5698 3439 2930 * 3624 17 0 * * * * * * 4459 0 0 L 18 5114 * * * 4235 * * 1088 * 3178 * * * * * * * 1568 * * 18 0 * * * * * * 4459 0 0 K 19 3925 * 3148 3747 * * 3728 4646 2496 * * 5195 * 4391 3956 4108 2871 3057 * * 19 0 * * * * * * 4459 0 0 I 20 4430 * * * * * * 756 * 4975 4138 * * * * * * 1874 * * 20 0 * * * * * * 4459 0 0 F 21 * 4631 * * 5525 * 3046 3450 1921 * * 5814 5497 * 2193 * 5143 4377 * 2985 21 0 * * * * * * 4459 0 0 I 22 1849 2815 * * * * * 2088 * 3491 * * * * * * 4044 2528 * 5497 22 0 * * * * * * 4459 0 0 S 23 4565 * * * * * 4970 * * * * * 608 * 4691 2511 * 4168 * * 23 51 * 4858 * * * * 4459 0 0 N 24 2563 6107 * * 3973 * 2440 * * 4795 5260 3710 * * * 3019 * * * 1706 24 43 * 5082 * * * 0 4401 0 1000 I 25 2381 * * * * 4038 * 2183 * 5739 * * 4206 * 4094 5647 3784 1723 * * 25 51 * 4856 * * 0 * 4362 0 1549 R 26 * 5628 * * * * * * 1672 * 3030 2831 4837 * 1442 * * * * * 26 99 * 3911 * * 0 * 4430 0 1000 F 27 2163 4033 5437 * 2758 * * 2572 * 5155 5400 * 3835 * * * 5416 2362 * 4769 27 151 4082 4634 2000 415 * 0 4445 1000 1689 S 28 4676 * * * * 4030 * * 2446 * * 2582 * 4770 5618 1297 3554 * * * 28 315 * 2350 * * 943 1060 4319 0 2200 A 29 2434 * 4270 1726 * * * 4816 4695 * * * * 4579 3996 3246 4435 2937 * * 29 329 * 2293 * * 2646 251 4354 0 2871 V 30 2009 * * * 4288 * * * 3792 * 3611 * 5299 3032 * 2420 4566 2559 * * 30 222 * 2811 * * 930 1073 4294 0 3327 G 31 5198 * 1528 3514 * 2631 5041 * 3954 * * 2359 * * * 4712 4347 * * * 31 161 * 3243 * * 692 1392 4285 0 3161 L 32 2660 * * * 4652 * * 3640 * 2684 2305 * 3912 * * * 2879 2631 * * 32 0 * * * * 988 1012 4320 0 2863 E 33 5051 * 2894 523 * * * * * * * 4014 * * * * 5203 4311 * * 33 53 4799 * 0 * 821 1205 4392 1000 2184 I 34 * * * * 2197 * * 1615 * 3548 3388 * * * * * * 2393 * 3571 34 0 * * * * * 0 4460 0 1344 I 35 4109 3585 2872 * 4182 * 5801 5487 * 4040 5747 4831 * 4837 * 3690 5764 2624 * 2190 35 36 * 5350 * * 628 1503 4460 0 1344 I 36 3975 * * * 4296 * 4717 1252 * 5242 4951 * * * * * * 1439 * * 36 0 * * * * * 0 4453 0 1308 Q 37 5065 * 1400 1744 5576 4191 4362 4951 5499 5242 * 5616 * 4743 * * 5072 * * * 37 0 * * * * 621 1515 4453 0 1308 E 38 5840 * 2028 2049 * 1738 * * * * * 2578 * * 5134 * * * * * 38 0 * * * * * 0 4475 0 1000 N 39 * 5377 4471 3411 * * * * 3464 4251 5767 2815 * 3425 3293 * 2002 4844 * 4218 39 32 5505 * 3585 126 * 0 4475 1000 1000 X 40 * 5409 2802 2283 * * * 3703 * 3200 3989 3956 * 2633 * * 3135 4663 * * 40 0 * * * * * 0 4469 0 1000 I 41 * * * * 314 * * 5527 * 3332 4863 * * * * * * 4640 * * 41 0 * * * * * 0 4475 0 1000 I 42 5437 * * * 5379 4121 4639 2905 2431 5526 * 4317 * * 3291 4212 2943 3056 * 4106 42 0 * * * * * 0 4475 0 1000 F 43 * * * * 301 * * 5500 * 3357 * * * * * * * 4864 * 4863 43 0 * * * * * 0 4475 0 1000 H 44 * 5598 4106 * 3503 * 1715 * * * * 5081 * * * 3572 4042 4836 * 1648 44 0 * * * * * 0 4475 0 1000 L 45 2851 2852 * * 4121 * * 5598 * 2263 5526 * * * * 1720 * 3168 * * 45 0 * * * * * 0 4475 0 1000 S 46 3596 * 4121 3968 * * 4309 * 1762 * * 3775 3117 * * 2272 4177 * * * 46 0 * * * * * 0 4475 0 1000 P 47 4121 * * * * * * * * * * * 85 * * * * * * * 47 59 4639 * 0 * * 0 4475 1000 1000 Y 48 * * * * * * * * * * * * * * * * * * * 0 48 0 * * * * * 0 4475 0 1000 Y 49 * * * * 1560 * * * * 3064 5081 * * * * * * * * 967 49 0 * * * * * 0 4475 0 1000 L 50 * * * * * * * * * 0 * * * * * * * * * * 50 0 * * * * * 0 4475 0 1000 R 51 * * * * * * * 5081 2346 * * * 4121 4971 687 3986 * * * * 51 0 * * * * 0 * 4475 0 1000 L 52 * * * * 4121 * * 3926 * 249 * * * * * * 4822 * * * 52 0 * * * * * * 4459 0 0 R 53 * * 4121 3788 * * 2754 3723 4450 * * 2297 * * 2667 * 2643 4168 * 5385 53 0 * * * * * * 4459 0 0 F 54 * * * * 1180 * * 4121 * 997 * * * * * * * * * * 54 0 * * * * * * 4459 0 0 P 55 5500 * 4129 * * * * * 3338 * * 4975 577 5077 * 3475 * * * * 55 0 * * * * * * 4459 0 0 H 56 * 4256 5397 4975 4700 1220 2414 * * * * 3981 * 2688 * * * * * 5783 56 52 4813 * 1000 1000 * * 4459 1000 0 E 57 4084 5115 3981 2503 4975 * * * 2941 * * 3996 3264 * 3299 2190 5451 * * * 57 0 * * * * * * 4459 0 0 L 58 * 4141 * 4767 * * * 1917 * 1889 * * * * * * * 1427 * * 58 84 4144 * 3585 126 * * 4474 1000 0 I 59 3526 * * 3740 5120 * * 3418 4970 3035 * * * 4291 4269 * * 1368 * 3800 59 51 * 4834 * * * * 4474 0 0 D 60 * * 1782 1111 * 4044 * * 3933 * * * * 4093 * * 4023 * * * 60 109 3778 * 3387 145 0 * 4424 1588 1000 D 61 3168 * 819 4440 * 3519 * * * * * 2916 * * * 4767 5674 * * * 61 36 * 5332 * * * * 4474 0 0 E 62 4125 * 2488 1647 * 1608 * 4810 5055 * * * * * 5088 5507 * * * * 62 123 * 3609 * * * 0 4445 0 1000 R 63 4028 * 5381 3971 * 3384 * 5144 3231 5509 * 3613 3776 4834 1950 3549 3955 * * * 63 138 3996 5144 0 * 479 1824 4312 1619 1996 S 64 2399 3486 4056 1704 * 4690 * * * * * 4296 * 5478 * 2047 * * * * 64 0 * * * * 0 * 4420 0 1461 T 65 5120 * 5500 4144 4252 5986 4112 * 2336 * * 4727 * 5978 4119 2208 2054 * * * 65 0 * * * * * * 4474 0 0 A 66 824 5455 * * 3644 2842 * * * * * * * 4834 * 4144 * 3306 * * 66 0 * * * * * * 4474 0 0 Q 67 4736 * 3385 2896 * * 5332 4970 4332 * * * * 3735 5805 1407 2869 5721 * * 67 93 4006 * 2879 211 * * 4474 1566 0 Y 68 * * * * 3108 * * 4865 * 4638 * * * * * 4144 * * 4767 481 68 0 * * * * * * 4474 0 0 D 69 * * 586 3092 * * * * 4767 * * 3738 * 4638 * 3948 * * * * 69 0 * * * * * * 4474 0 0 S 70 3376 3658 * * 4110 * 5120 2834 4144 3964 * * 2759 * 4865 2492 4909 3959 5674 * 70 28 5721 * 1000 1000 * * 4474 1000 0 K 71 5131 * 1593 2243 * 5494 5879 4110 3039 4865 * 5281 * 4201 * 3388 * * * * 71 0 * * * * * * 4474 0 0 D 72 4091 * 3241 3815 * * 4144 * 2477 * * 3661 * 3537 4901 2766 2452 * * * 72 0 * * * * * * 4474 0 0 E 73 * 4865 * 2809 4834 1052 * * * 4638 * 4215 * 5281 * 4351 * 4144 * 3639 73 0 * * * * * * 4474 0 0 C 74 5455 4631 2630 3455 5589 * * 5978 4148 4545 5074 * * * * 2279 2799 3640 * 3496 74 0 * * * * * * 4474 0 0 I 75 * 5515 * * 1517 * 4832 2635 * 2106 * * * * * * * 3064 4118 5431 75 0 * * * * * * 4477 0 0 N 76 * * 4689 * 4632 * 2733 4404 3844 * * 4434 * * 3699 * 1022 4715 * * 76 0 * * * * * * 4477 0 0 V 77 5069 5359 * * 3840 * * 1452 * 3817 * * * * * * * 1186 * * 77 0 * * * * * * 4477 0 0 K 78 * * * * * * 3648 4632 1562 4892 * 4106 * 6054 4013 5489 2322 * * 2736 78 0 * * * * * * 4477 0 0 V 79 4343 * * * 3163 * * 2455 * 1034 4735 * * * * * * 2933 * * 79 0 * * * * * * 4477 0 0 A 80 5514 5431 * 3471 * * * * 3945 4339 * 3328 1098 5114 3953 4716 4259 * * * 80 0 * * * * * * 4477 0 0 K 81 * * * * * * * * 0 * * * * * * * * * * * 81 47 * 4956 * * * * 4477 0 0 L 82 3120 * * 1330 * * * * 3276 3203 4733 * * 4545 * 4745 * 2664 * * 82 0 * * * * 0 * 4437 0 1000 N 83 * 4892 * 4566 * * 3193 3412 5266 * * 1983 * 2929 * 3602 2819 3890 * 5715 83 0 * * * * * * 4477 0 0 K 84 4332 * 4594 4208 * * * 5337 1452 * * 5256 1599 * 3773 5728 * 5954 * * 84 0 * * * * * * 4320 0 0 N 85 4999 * * * * 190 * * 4753 * * 5506 4920 * * * * * * * 85 103 * 3860 * * * * 4320 0 0 E 86 * * * 602 * 4401 * * 5230 * * * * 1905 * * * * * * 86 0 * * * * 0 * 4341 0 1650 Y 87 * * 3324 4055 3315 * 1274 * 4273 4047 * * * * * * * 2893 * 3657 87 0 * * * * * * 4320 0 0 F 88 * * * * 61 * * * * * * * * * * * * * 4594 * 88 0 * * * * * * 4320 0 0 E 89 * * 4091 1486 * * * * 3531 5123 * 5222 1807 * * 4712 3078 * * * 89 0 * * * * * * 4295 0 0 D 90 * * 1211 3730 * 2335 * * 4871 * * 2089 * * * 5314 * * * * 90 0 * * * * * * 4246 0 0 L 91 * * * * * * * 4619 * 60 * * * * * * * * * * 91 0 * * * * * * 4246 0 0 D 92 * * 337 3361 * * * * * 4619 * 3829 * * * * * * * * 92 0 * * * * * * 4246 0 0 L 93 * * * * * * * * * 978 1462 3738 * * 4992 * * 5454 * * 93 0 * * * * * * 4041 0 0 P 94 4250 * * * * * * 1554 * 1499 * * 3034 * * 5377 5428 3579 * * 94 0 * * * * * * 4041 0 0 T 95 2708 * * * * 4182 * * * * * 4149 4526 * * 3726 698 * * * 95 0 * * * * * * 3983 0 0 K 96 5609 * * 4561 * * * * 1375 3905 * * * 3988 4182 3837 2395 * 5115 3685 96 0 * * * * * * 3983 0 0 L 97 * * * * 3814 * * * * 156 4998 * * * * * * * * * 97 0 * * * * * * 3983 0 0 L 98 * * * * * * * 3563 * 128 * * * * * * * * * * 98 0 * * 0 * * * 3815 0 0 //