HHsearch 1.5 NAME c3egrA_ FAM FILE c3egrA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c3egrA_.a3m DATE Wed Jan 9 16:26:51 2013 LENG 63 match states, 63 columns in multiple alignment FILT 18 out of 22 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.0 EVD 0.4740 2.0399 SEQ >ss_dssp CCCCCEEEEEEECTTCSSCEEEEEEECSSHHHHHHHHHHHTTTTCTTCEEEEEEGGGCCCCCC >sa_dssp EEEDDDBBACCDDDECEECDEDCDBEACDDECACECADDEDBEDEEECCCECCCCEEDEEEEE >ss_pred CCCCCEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEHHHHCCCCC >ss_conf 986752589983578997046644426988999998987641056750599983114313697 >Consensus xxxwxxxEVFxqxxxgxxhxhvGSvhAxdxexALxxARxxfxRRxxxxslWvVxxxxIxaxxp >c3egrA_ QKEWPLWEVFVRSKQGLEHKHCGSLHATDAQQALHXARDVYTRRQEGVSIWVVPSTAITASAP >UniRef50_C7PJU5(27-87:122) Phenylacetic acid degradation B n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PJU5_CHIPD E=2e-19 s/c=1.58 id=40% cov=98% -ENWNVFEVFHQEKRGAHHEHVGCVHAPDANLALIFAKEQFGRRKKCVNLWVVRSADILAFD- >UniRef50_A3KI27(12-68:103) Putative phenylacetic acid degradation protein n=3 Tax=Streptomyces RepID=A3KI27_STRAM E=3e-10 s/c=1.16 id=52% cov=92% ------WEVFLRGRRGLAHQHVGSVRAAGPDAALAAARDLYTRRGEPLSLWVVRSDAVHAASP >UniRef50_D1C840(3-55:96) Phenylacetic acid degradation B n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C840_SPHTD E=6e-09 s/c=1.17 id=37% cov=86% -----IYEVFRQEREGEPMVHVGNVQAPGDDLARQYAREVYSRRGEATRLWLVPRAAI----- >UniRef50_Q72K11(5-59:175) Phenylacetic acid degradation protein paaB n=3 Tax=Thermus RepID=Q72K11_THET2 E=1e-06 s/c=0.99 id=38% cov=89% --EWPRFEVIKQDTERSLPQMVGSVHATDPEHALLVARHVFVRRPSAYALFVAPAEA------ >UniRef50_Q67LH6(10-70:116) Phenylacetic acid degradation protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67LH6_SYMTH E=3e-06 s/c=0.87 id=34% cov=98% -RRFRVYEIFVQKDHQSPHVWVGSVDAGSAEDALLLARESFLRRDPAVSIWAVEQSAIHRTD- >UniRef50_C0Z558(4-65:110) Putative phenylacetate degradation protein n=2 Tax=Paenibacillaceae RepID=C0Z558_BREBN E=4e-06 s/c=0.85 id=27% cov=100% -ENFFIYEVFSQKSVNAPFVQQFSLLAPNKEVALSMARENFLRREPCFNLWVVKRDDIFGLPP >UniRef50_Q1IX22(8-68:192) Phenylacetate-CoA oxygenase, PaaB subunit n=5 Tax=Deinococci RepID=Q1IX22_DEIGD E=3e-15 s/c=1.36 id=37% cov=98% --QWSRWEVFKQDAPGKPYQAVGSVHAGDPDHALLTARNVFVRRPSAVSLWTVREADLLTATP >UniRef50_C8WU87(20-78:125) Phenylacetic acid degradation B n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WU87_ALIAD E=2e-13 s/c=1.30 id=34% cov=94% ---YDVYEIFVQASDLDPHVHVGSLLAPSPEWALQLARENFLRRADAVSVWAVRRGDVHAT-- >UniRef50_D2RY10(2-54:105) Phenylacetic acid degradation B n=4 Tax=Halobacteriaceae RepID=D2RY10_9EURY E=2e-12 s/c=1.38 id=43% cov=86% -----IWEVFRQEKTGQYHTHCGNVHASDREMARQFAAIQHGRRKPTNSLWVVPREEI----- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * Q 1 * * * 2394 * * * * * * * 2330 * 2303 1292 * * * * * 1 0 * * * * * * 1461 0 0 K 2 * * * 1549 * * * * 3293 * * 3391 * * 1826 2483 * * * * 2 0 * * * * * * 2370 0 0 E 3 4073 * 2703 2051 * * * * * * * 2007 4040 3163 3006 * * * * * 3 0 * * * * * * 2761 0 0 W 4 * * * * 2445 * * * * * * * * * * * * * 669 2414 4 0 * * * * * * 2825 0 0 P 5 * * 3546 * 3480 4348 * * * * * 3426 1521 3293 3412 2856 * * * * 5 0 * * * * * * 2825 0 0 L 6 * * * * * * * 1989 * 1689 * * * * 2619 * * 1861 * * 6 0 * * * * * * 3043 0 0 W 7 * * * * 2152 * * * * * * * * * * * * * 1239 1509 7 0 * * * * * * 3075 0 0 E 8 * * * 0 * * * * * * * * * * * * * * * * 8 0 * * * * * * 3075 0 0 V 9 * * * * * * * 2931 * * * * * * * * * 203 * * 9 0 * * * * * * 3075 0 0 F 10 * * * * 136 * * 3471 * * * * * * * * * * * * 10 0 * * * * * * 3075 0 0 V 11 * * * * * * 4033 4225 2666 4355 * * * * 2876 2844 * 1309 * * 11 0 * * * * * * 3075 0 0 R 12 * * * * * * * * * * * * * 743 1313 * * * * * 12 0 * * * * * * 3075 0 0 S 13 4031 * 2666 2341 * 3521 * * 2883 * * * 4439 * 3761 2050 * * * * 13 0 * * * * * * 3075 0 0 K 14 3049 * 3836 * * * * * 1760 * * * * * 2664 2379 2609 * * * 14 0 * * * * * * 3075 0 0 Q 15 4414 * 4031 2708 * * 3836 * * * * * 2825 3725 1904 * 3066 3932 * * 15 0 * * * * * * 3075 0 0 G 16 * * * 3761 * 645 * * * 4031 * 3932 * 3836 3471 * * * * * 16 0 * * * * * * 3075 0 0 L 17 2021 * 4031 3991 * * * * 3893 1605 * * * 3769 * 2642 * * * * 17 0 * * * * * * 3075 0 0 E 18 4355 * 4735 2852 * * 4033 * * 3471 * 4709 1162 * * 3931 * * * 3769 18 0 * * * * * * 3075 0 0 H 19 * * * * 3932 * 643 * * 3761 3991 * 3471 * * * * * * 3893 19 0 * * * * * * 3075 0 0 K 20 * * * 3222 * * * * 2953 * * * * 1836 4414 * 3769 1461 * * 20 0 * * * * * * 3075 0 0 H 21 3893 * * * * * 500 * * * 3471 * * 3932 * * * * 3836 * 21 0 * * * * * * 3075 0 0 C 22 3163 2352 * * * * * 4225 * * * * * 2844 * * * 1001 * * 22 0 * * * * * * 3075 0 0 G 23 * * * * 2844 216 * * * * * * * * * * * * * * 23 0 * * * * * * 3075 0 0 S 24 * 4033 * * * * * * * * * 2876 * * * 317 * * * * 24 0 * * * * * * 3075 0 0 L 25 * * * * * * * * * 1058 * * * * * * * 944 * * 25 0 * * * * * * 3075 0 0 H 26 * * 3836 * * * 807 * * 2319 * * * 3991 3397 * * * * * 26 0 * * * * * * 3075 0 0 A 27 0 * * * * * * * * * * * * * * * * * * * 27 0 * * * * * * 3075 0 0 T 28 3533 * * 4225 * 2864 * * * * * * 1224 * * 3056 2520 * * * 28 0 * * * * * * 3075 0 0 D 29 * * 948 * * 3162 4439 * * * * 2844 * * * 2437 * * * * 29 0 * * * * * * 3075 0 0 A 30 1256 * 3306 3761 * * * * 3932 * * * 1902 * 3769 * * * * * 30 0 * * * * * * 3075 0 0 Q 31 3931 * 2481 806 * * * * * * * 4033 * 4715 4414 4735 * * * * 31 0 * * * * * * 3075 0 0 Q 32 4355 * 3836 * * * 2666 * * 2339 1701 * * 3449 * * * 3932 4031 * 32 0 * * * * * * 3075 0 0 A 33 0 * * * * * * * * * * * * * * * * * * * 33 0 * * * * * * 3075 0 0 L 34 * * * * * * * 3447 * 373 * * * * 2876 * * * * * 34 0 * * * * * * 3075 0 0 H 35 4355 * 4709 * * * 4715 4033 * 2136 * * * 1784 3278 3932 4225 3761 * * 35 0 * * * * * * 3075 0 0 X 36 3455 * * * 2858 * 3325 * * 2902 2442 3823 * * * * 3865 3444 * 3034 36 0 * * * * * * 3076 0 0 A 37 0 * * * * * * * * * * * * * * * * * * * 37 0 * * * * * * 3075 0 0 R 38 3769 * * * * * * * 4033 * * * * 3761 337 * * * * * 38 0 * * * * * * 3075 0 0 D 39 * * 1416 1342 * * 3471 3769 * * * 3893 * * * * * * * * 39 0 * * * * * * 3075 0 0 V 40 * * * * * * * * * 2712 * 2319 * 2895 * 3836 * 1176 * * 40 0 * * * * * * 3075 0 0 Y 41 * * * * 1032 * 3769 * * * * * * * * * * * * 1192 41 0 * * * * * * 3075 0 0 T 42 4439 * * * * 2895 * 4225 * 2346 3761 * * * * 3991 1862 2666 * * 42 0 * * * * * * 3075 0 0 R 43 * * * * * * * * * * * * * * 0 * * * * * 43 0 * * * * * * 3075 0 0 R 44 * * * * * * * * * * * * * * 0 * * * * * 44 0 * * * * * * 3075 0 0 Q 45 4031 * 3836 2844 * 2664 * * 2895 * * 3268 2666 3556 4735 4225 * * * * 45 0 * * * * * * 3075 0 0 E 46 * * 4031 1353 * * * * 4033 * * * 1605 * * 2666 * * * * 46 0 * * * * * * 3075 0 0 G 47 1508 2982 * * * 1838 * * * * * * 4355 * * * 3769 3061 * * 47 0 * * * * * * 3075 0 0 V 48 3761 4414 * * 3932 * * * * 3289 * 3769 * * * * 3991 1044 * 3471 48 0 * * * * * * 3075 0 0 S 49 3471 * 3761 * * * * * * * * 2982 * * 3991 629 * * * * 49 0 * * * * * * 3075 0 0 I 50 * * * * * * * 1519 * 881 * * * * * * * 3210 * * 50 0 * * * * * * 3075 0 0 W 51 * * * * 3471 * * * * * * * * * * * * * 136 * 51 0 * * * * * * 3075 0 0 V 52 2931 * * * * * * * * 3991 * * * * * * 3893 437 * * 52 0 * * * * * * 3075 0 0 V 53 3471 * * * * * * * * * * * * * * * * 136 * * 53 0 * * * * * * 3075 0 0 P 54 * * * 3836 * * * * 2375 * * * 1273 * 1628 * * * * * 54 0 * * * * * * 3075 0 0 S 55 2366 * * 3893 * * * * * * * * * 3836 1571 1806 4439 * * * 55 0 * * * * * * 3075 0 0 T 56 1905 * 1906 2347 * 3210 * * * * * * * * * 3018 4715 * * * 56 0 * * * * * * 3075 0 0 A 57 1123 * 1528 3769 * * * * * * * * * 4414 * * * * * 3761 57 0 * * * * * * 3075 0 0 I 58 * * * * * * * 433 * 3568 * * * * * * * 2517 * * 58 0 * * * * * * 2954 0 0 T 59 4488 * * * 3164 * 1708 * * 2290 * * * * * 4377 2698 3974 * 3889 59 0 * * * * * * 2782 0 0 A 60 802 * * * * 3164 * * * * * * * * 3464 3081 3238 * * * 60 0 * * * * * * 2782 0 0 S 61 2525 * * * 3345 * * * * 3164 * * * * * 1394 2085 * * * 61 0 * * * * * * 2782 0 0 A 62 4235 * 1204 * * * * * * * * * 3010 3746 3798 2954 3146 * * * 62 0 * * * * * * 2742 0 0 P 63 * * * 3319 * * * * * * * * 152 * * * * * * * 63 0 * * 0 * * * 2470 0 0 //